A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

A3 | Accurate, Adaptable, and Accessible Error Metrics for Predictive Models |

aaSEA | Amino Acid Substitution Effect Analyser |

AATtools | Reliability and Scoring Routines for the Approach-Avoidance Task |

ABACUS | Apps Based Activities for Communicating and Understanding Statistics |

abbyyR | Access to Abbyy Optical Character Recognition (OCR) API |

abc | Tools for Approximate Bayesian Computation (ABC) |

abc.data | Data Only: Tools for Approximate Bayesian Computation (ABC) |

ABC.RAP | Array Based CpG Region Analysis Pipeline |

abcADM | Fit Accumulated Damage Models and Estimate Reliability using ABC |

ABCanalysis | Computed ABC Analysis |

abcdeFBA | ABCDE_FBA: A-Biologist-Can-Do-Everything of Flux Balance Analysis with this package |

ABCoptim | Implementation of Artificial Bee Colony (ABC) Optimization |

ABCp2 | Approximate Bayesian Computational Model for Estimating P2 |

abcrf | Approximate Bayesian Computation via Random Forests |

abcrlda | Asymptotically Bias-Corrected Regularized Linear Discriminant Analysis |

abctools | Tools for ABC Analyses |

abd | The Analysis of Biological Data |

abdiv | Alpha and Beta Diversity Measures |

abe | Augmented Backward Elimination |

abf2 | Load Gap-Free Axon ABF2 Files |

ABHgenotypeR | Easy Visualization of ABH Genotypes |

abind | Combine Multidimensional Arrays |

abjutils | Useful Tools for Jurimetrical Analysis Used by the Brazilian Jurimetrics Association |

abnormality | Measure a Subject's Abnormality with Respect to a Reference Population |

abodOutlier | Angle-Based Outlier Detection |

ABPS | The Abnormal Blood Profile Score to Detect Blood Doping |

abstractr | An R-Shiny Application for Creating Visual Abstracts |

abtest | Bayesian A/B Testing |

Ac3net | Inferring Directional Conservative Causal Core Gene Networks |

ACA | Abrupt Change-Point or Aberration Detection in Point Series |

acc | Exploring Accelerometer Data |

accelerometry | Functions for Processing Accelerometer Data |

accelmissing | Missing Value Imputation for Accelerometer Data |

accept | The Acute COPD Exacerbation Prediction Tool (ACCEPT) |

AcceptanceSampling | Creation and Evaluation of Acceptance Sampling Plans |

accrual | Bayesian Accrual Prediction |

accSDA | Accelerated Sparse Discriminant Analysis |

accucor | Natural Abundance Correction of Mass Spectrometer Data |

ACD | Categorical data analysis with complete or missing responses |

ACDm | Tools for Autoregressive Conditional Duration Models |

ace2fastq | ACE File to FASTQ Converter |

acebayes | Optimal Bayesian Experimental Design using the ACE Algorithm |

aceEditor | The 'Ace' Editor as a HTML Widget |

acepack | ACE and AVAS for Selecting Multiple Regression Transformations |

ACEsearch | 'ACE' Search Engine API |

ACEt | Estimation of Dynamic Heritability and Comparison of Twin Models |

acfMPeriod | Robust Estimation of the ACF from the M-Periodogram |

acid | Analysing Conditional Income Distributions |

acled.api | Automated Retrieval of ACLED Conflict Event Data |

acmeR | Implements ACME Estimator of Bird and Bat Mortality by Wind Turbines |

ACNE | Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization |

acnr | Annotated Copy-Number Regions |

acopula | Modelling Dependence with Multivariate Archimax (or any User-Defined Continuous) Copulas |

AcousticNDLCodeR | Coding Sound Files for Use with NDL |

acp | Autoregressive Conditional Poisson |

aCRM | Convenience functions for analytical Customer Relationship Management |

acroname | Engine for Acronyms and Initialisms |

AcrossTic | A Cost-Minimal Regular Spanning Subgraph with TreeClust |

acrt | Autocorrelation Robust Testing |

acs | Download, Manipulate, and Present American Community Survey and Decennial Data from the US Census |

ACSNMineR | Gene Enrichment Analysis from ACSN Maps or GMT Files |

acss | Algorithmic Complexity for Short Strings |

acss.data | Data Only: Algorithmic Complexity of Short Strings (Computed via Coding Theorem Method) |

ACSWR | A Companion Package for the Book "A Course in Statistics with R" |

act | Aligned Corpus Toolkit |

ACTCD | Asymptotic Classification Theory for Cognitive Diagnosis |

ActCR | Extract Circadian Rhythms Metrics from Actigraphy Data |

actel | Acoustic Telemetry Data Analysis |

ActFrag | Activity Fragmentation Metrics Extracted from Minute Level Activity Data |

activatr | Utilities for Parsing and Plotting Activities |

ActiveDriver | Finding Cancer Driver Proteins with Enriched Mutations in Post-Translational Modification Sites |

ActiveDriverWGS | A Driver Discovery Tool for Cancer Whole Genomes |

activegp | Gaussian Process Based Design and Analysis for the Active Subspace Method |

ActivePathways | Integrative Pathway Enrichment Analysis of Multivariate Omics Data |

activity | Animal Activity Statistics |

activityCounts | Generate ActiLife Counts |

activityGCMM | Circular Mixed Effect Mixture Models of Animal Activity Patterns |

ActivityIndex | Activity Index Calculation using Raw 'Accelerometry' Data |

activPAL | Advanced Processing and Chart Generation from activPAL Events Files |

actogrammr | Read in Activity Data and Plot Actograms |

actuar | Actuarial Functions and Heavy Tailed Distributions |

actuaryr | Develop Actuarial Models |

AcuityView | A Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity |

acumos | 'Acumos' R Interface |

ada | The R Package Ada for Stochastic Boosting |

adabag | Applies Multiclass AdaBoost.M1, SAMME and Bagging |

adagio | Discrete and Global Optimization Routines |

adamethods | Archetypoid Algorithms and Anomaly Detection |

AdapEnetClass | A Class of Adaptive Elastic Net Methods for Censored Data |

AdapSamp | Adaptive Sampling Algorithms |

adapt4pv | Adaptive Approaches for Signal Detection in Pharmacovigilance |

adaptalint | Check Code Style Painlessly |

AdaptFit | Adaptive Semiparametic Regression |

AdaptFitOS | Adaptive Semiparametric Additive Regression with Simultaneous Confidence Bands and Specification Tests |

AdaptGauss | Gaussian Mixture Models (GMM) |

adaptiveGPCA | Adaptive Generalized PCA |

AdaptiveSparsity | Adaptive Sparsity Models |

adaptivetau | Tau-Leaping Stochastic Simulation |

adaptMCMC | Implementation of a Generic Adaptive Monte Carlo Markov Chain Sampler |

adaptMT | Adaptive P-Value Thresholding for Multiple Hypothesis Testing with Side Information |

ADAPTS | Automated Deconvolution Augmentation of Profiles for Tissue Specific Cells |

adaptsmoFMRI | Adaptive Smoothing of FMRI Data |

adaptTest | Adaptive two-stage tests |

AdaSampling | Adaptive Sampling for Positive Unlabeled and Label Noise Learning |

ADCT | Adaptive Design in Clinical Trials |

add2ggplot | Add to 'ggplot2' |

addhaz | Binomial and Multinomial Additive Hazard Models |

addhazard | Fit Additive Hazards Models for Survival Analysis |

addinsJoaoMelo | Addins Made of Joao Melo |

addinslist | Discover and Install Useful RStudio Addins |

addinsOutline | 'RStudio' Addins for Show Outline of a R Markdown/'LaTeX' Project |

additiveDEA | Additive Data Envelopment Analysis Models |

additivityTests | Additivity Tests in the Two Way Anova with Single Sub-class Numbers |

addreg | Additive Regression for Discrete Data |

addScales | Adds Labeled Center Line and Scale Lines/Regions to Trellis Plots |

ADDT | Analysis of Accelerated Destructive Degradation Test Data |

ade4 | Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences |

ade4TkGUI | 'ade4' Tcl/Tk Graphical User Interface |

adegenet | Exploratory Analysis of Genetic and Genomic Data |

adegraphics | An S4 Lattice-Based Package for the Representation of Multivariate Data |

adehabitatHR | Home Range Estimation |

adehabitatHS | Analysis of Habitat Selection by Animals |

adehabitatLT | Analysis of Animal Movements |

adehabitatMA | Tools to Deal with Raster Maps |

adephylo | Exploratory Analyses for the Phylogenetic Comparative Method |

adepro | A 'shiny' Application for the (Audio-)Visualization of Adverse Event Profiles |

adept | Adaptive Empirical Pattern Transformation |

adeptdata | Accelerometry Data Sets |

AdequacyModel | Adequacy of Probabilistic Models and General Purpose Optimization |

adespatial | Multivariate Multiscale Spatial Analysis |

adfExplorer | Import from and Export to Amiga Disk Files |

ADGofTest | Anderson-Darling GoF test |

adheRenceRX | Assess Medication Adherence from Pharmaceutical Claims Data |

AdhereR | Adherence to Medications |

AdhereRViz | Interactive Visualisation of Medication Adherence Patterns |

adhoc | Calculate Ad Hoc Distance Thresholds for DNA Barcoding Identification |

adimpro | Adaptive Smoothing of Digital Images |

adiv | Analysis of Diversity |

AdjBQR | Adjusted Bayesian Quantile Regression Inference |

adjclust | Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix |

adjustedcranlogs | Remove Automated and Repeated Downloads from 'RStudio' 'CRAN' Download Logs |

adklakedata | Adirondack Long-Term Lake Data |

adlift | An Adaptive Lifting Scheme Algorithm |

admisc | Adrian Dusa's Miscellaneous |

AdMit | Adaptive Mixture of Student-t Distributions |

admixr | An Interface for Running 'ADMIXTOOLS' Analyses |

admixturegraph | Admixture Graph Manipulation and Fitting |

ADMM | Algorithms using Alternating Direction Method of Multipliers |

admmDensestSubmatrix | Alternating Direction Method of Multipliers to Solve Dense Dubmatrix Problem |

ADMMnet | Regularized Model with Selecting the Number of Non-Zeros |

ADMMsigma | Penalized Precision Matrix Estimation via ADMM |

ADMUR | Ancient Demographic Modelling Using Radiocarbon |

adnuts | No-U-Turn MCMC Sampling for 'ADMB' Models |

adobeanalyticsr | R Client for 'Adobe Analytics' API 2.0 |

adoption | Modelling Adoption Process in Marketing |

adoptr | Adaptive Optimal Two-Stage Designs in R |

ADPclust | Fast Clustering Using Adaptive Density Peak Detection |

ADPF | Use Least Squares Polynomial Regression and Statistical Testing to Improve Savitzky-Golay |

adpss | Design and Analysis of Locally or Globally Efficient Adaptive Designs |

ads | Spatial Point Patterns Analysis |

adsDataHubR | Google Ads Data Hub API Client |

ADtools | Automatic Differentiation Toolbox |

AdvancedBasketballStats | Advanced Basketball Statistics |

AdvBinomApps | Upper Clopper-Pearson Confidence Limits for Burn-in Studies under Additional Available Information |

advclust | Object Oriented Advanced Clustering |

AdvDif4 | Solving 1D Advection Bi-Flux Diffusion Equation |

adventr | Interactive R Tutorials to Accompany Field (2016), "An Adventure in Statistics" |

ADVICE | Automatic Direct Variable Selection via Interrupted Coefficient Estimation |

adwave | Wavelet Analysis of Genomic Data from Admixed Populations |

adwordsR | Access the 'Google Adwords' API |

AEDForecasting | Change Point Analysis in ARIMA Forecasting |

AEenrich | Adverse Event Enrichment Tests |

aemo | Download and Process AEMO Price and Demand Data |

AEP | Statistical Modelling for Asymmetric Exponential Power Distribution |

AER | Applied Econometrics with R |

AeRobiology | A Computational Tool for Aerobiological Data |

AF | Model-Based Estimation of Confounder-Adjusted Attributable Fractions |

afc | Generalized Discrimination Score |

afCEC | Active Function Cross-Entropy Clustering |

afex | Analysis of Factorial Experiments |

affinitymatrix | Estimation of Affinity Matrix |

affluenceIndex | Affluence Indices |

AFheritability | The Attributable Fraction (AF) Described as a Function of Disease Heritability, Prevalence and Intervention Specific Factors |

AFM | Atomic Force Microscope Image Analysis |

afmToolkit | Functions for Atomic Force Microscope Force-Distance Curves Analysis |

afpt | Tools for Modelling of Animal Flight Performance |

aftgee | Accelerated Failure Time Model with Generalized Estimating Equations |

AGD | Analysis of Growth Data |

aGE | Adaptive Set-Based Gene-Environment Interaction Test for Rare Variants |

AggregateR | Aggregate Numeric, Date and Categorical Variables |

aggregation | p-Value Aggregation Methods |

AGHmatrix | Relationship Matrices for Diploid and Autopolyploid Species |

aghq | Adaptive Gauss Hermite Quadrature for Bayesian Inference |

agop | Aggregation Operators and Preordered Sets |

AGPRIS | AGricultural PRoductivity in Space |

AGread | Read Data Files from ActiGraph Monitors |

agRee | Various Methods for Measuring Agreement |

AgreementInterval | Agreement Interval of Two Measurement Methods |

agricolae | Statistical Procedures for Agricultural Research |

agridat | Agricultural Datasets |

agriTutorial | Tutorial Analysis of Some Agricultural Experiments |

agriwater | Evapotranspiration and Energy Fluxes Spatial Analysis |

agrmt | Calculate Concentration and Dispersion in Ordered Rating Scales |

agroclim | Climatic Indices for Agriculture |

agrostab | Stability Analysis for Agricultural Research |

AGSDest | Estimation in Adaptive Group Sequential Trials |

agsemisc | Miscellaneous plotting and utility functions |

agtboost | Adaptive and Automatic Gradient Boosting Computations |

ahaz | Regularization for semiparametric additive hazards regression |

AHM | Additive Heredity Model: Method for the Mixture-of-Mixtures Experiments |

AHMbook | Functions and Data for the Book 'Applied Hierarchical Modeling in Ecology' Vols 1 and 2 |

ahnr | An Implementation of the Artificial Hydrocarbon Networks |

AhoCorasickTrie | Fast Searching for Multiple Keywords in Multiple Texts |

AHPhybrid | AHP Hybrid Method |

ahpsurvey | Analytic Hierarchy Process for Survey Data |

ahptopsis2n | Hybrid Method for Multiple Criteria Decision-Making (MCDM) |

aibd | Attraction Indian Buffet Distribution |

AICcmodavg | Model Selection and Multimodel Inference Based on (Q)AIC(c) |

AID | Box-Cox Power Transformation |

aidar | Tools for Reading AIDA Files |

aif360 | Help Detect and Mitigate Bias in Machine Learning Models |

AIG | Automatic Item Generator |

aimPlot | Create Pie Like Plot for Completeness |

aimsir17 | Irish Weather Observing Stations Hourly Records for 2017 |

aire.zmvm | Download Mexico City Pollution, Wind, and Temperature Data |

airGR | Suite of GR Hydrological Models for Precipitation-Runoff Modelling |

airGRdatassim | Ensemble-Based Data Assimilation with GR Hydrological Models |

airGRteaching | Teaching Hydrological Modelling with the GR Rainfall-Runoff Models ('Shiny' Interface Included) |

aiRly | R Wrapper for 'Airly' API |

airportr | Convenience Tools for Working with Airport Data |

airports | Data on Airports |

airqualityES | Air Quality Measurements in Spain from 2011 to 2018 |

airr | AIRR Data Representation Reference Library |

AirSensor | Process and Display Data from Air Quality Sensors |

airt | Evaluation of Algorithm Collections Using Item Response Theory |

aiRthermo | Atmospheric Thermodynamics and Visualization |

ajv | Another JSON Schema Validator |

akc | Automatic Knowledge Classification |

Ake | Associated Kernel Estimations |

akiFlagger | Flags Acute Kidney Injury (AKI) |

akima | Interpolation of Irregularly and Regularly Spaced Data |

akmbiclust | Alternating K-Means Biclustering |

akmeans | Adaptive Kmeans algorithm based on threshold |

akmedoids | Anchored Kmedoids for Longitudinal Data Clustering |

ALA4R | Atlas of Living Australia (ALA) Data and Resources in R |

alabama | Constrained Nonlinear Optimization |

alakazam | Immunoglobulin Clonal Lineage and Diversity Analysis |

ALassoSurvIC | Adaptive Lasso for the Cox Regression with Interval Censored and Possibly Left Truncated Data |

albatross | PARAFAC Analysis of Fluorescence Excitation-Emission Matrices |

albopictus | Age-Structured Population Dynamics Model |

ald | The Asymmetric Laplace Distribution |

ALDqr | Quantile Regression Using Asymmetric Laplace Distribution |

ALEPlot | Accumulated Local Effects (ALE) Plots and Partial Dependence (PD) Plots |

aLFQ | Estimating Absolute Protein Quantities from Label-Free LC-MS/MS Proteomics Data |

alfr | Connectivity to 'Alfresco' Content Management Repositories |

alfred | Downloading Time Series from ALFRED Database for Various Vintages |

algaeClassify | Determine Phytoplankton Functional Groups Based on Functional Traits |

AlgDesign | Algorithmic Experimental Design |

AlgebraicHaploPackage | Haplotype Two Snips Out of a Paired Group of Patients |

algo | Implement an Address Search Auto Completion Menu on 'Shiny' Text Inputs Using the 'Algolia Places' 'Javascript' Library |

algorithmia | Allows you to Easily Interact with the Algorithmia Platform |

aliases2entrez | Converts Human gene symbols to entrez IDs |

alignfigR | Visualizing Multiple Sequence Alignments with 'ggplot2' |

alineR | Alignment of Phonetic Sequences Using the 'ALINE' Algorithm |

allcontributors | Acknowledge all Contributors to a Project |

alleHap | Allele Imputation and Haplotype Reconstruction from Pedigree Databases |

allelematch | Identifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present |

AlleleRetain | Allele Retention, Inbreeding, and Demography |

AlleleShift | Predict and Visualize Population-Level Changes in Allele Frequencies in Response to Climate Change |

allelic | A fast, unbiased and exact allelic exact test |

allestimates | Effect Estimates from All Models |

AllPossibleSpellings | Computes all of a word's possible spellings |

alluvial | Alluvial Diagrams |

almanac | Tools for Working with Recurrence Rules |

alookr | Model Classifier for Binary Classification |

alpaca | Fit GLM's with High-Dimensional k-Way Fixed Effects |

alphabetr | Algorithms for High-Throughput Sequencing of Antigen-Specific T Cells |

alphahull | Generalization of the Convex Hull of a Sample of Points in the Plane |

alphaOutlier | Obtain Alpha-Outlier Regions for Well-Known Probability Distributions |

AlphaPart | Partition/Decomposition of Breeding Values by Paths of Information |

alphashape3d | Implementation of the 3D Alpha-Shape for the Reconstruction of 3D Sets from a Point Cloud |

AlphaSimR | Breeding Program Simulations |

alphastable | Inference for Stable Distribution |

AlphaVantageClient | Wrapper for Alpha Vantage API |

alphavantager | Lightweight R Interface to the Alpha Vantage API |

alr4 | Data to Accompany Applied Linear Regression 4th Edition |

ALS | Multivariate Curve Resolution Alternating Least Squares (MCR-ALS) |

ALSCPC | Accelerated line search algorithm for simultaneous orthogonal transformation of several positive definite symmetric matrices to nearly diagonal form |

ALSM | Companion to Applied Linear Statistical Models |

altadata | API Wrapper for Altadata.io |

altair | Interface to 'Altair' |

altfuelr | Provides an Interface to the NREL Alternate Fuels Locator |

altmeta | Alternative Meta-Analysis Methods |

ALTopt | Optimal Experimental Designs for Accelerated Life Testing |

altR2 | Alternative Estimators to Adjusted R-Squared |

amap | Another Multidimensional Analysis Package |

AMAP.Seq | Compare Gene Expressions from 2-Treatment RNA-Seq Experiments |

amapGeocode | An Interface to the 'AutoNavi Maps' API Geocoding Services |

amber | Automated Model Benchmarking R Package |

ambhasGW | Ground Water Modelling |

ambient | A Generator of Multidimensional Noise |

ambiorix | Web Framework Inspired by 'Express.js' |

AMCP | A Model Comparison Perspective |

AMCTestmakeR | Generate LaTeX Code for Auto-Multiple-Choice (AMC) |

Amelia | A Program for Missing Data |

amelie | Anomaly Detection with Normal Probability Functions |

amen | Additive and Multiplicative Effects Models for Networks and Relational Data |

AmericanCallOpt | This package includes pricing function for selected American call options with underlying assets that generate payouts |

amerika | American Politics-Inspired Color Palette Generator |

AmesHousing | The Ames Iowa Housing Data |

AMGET | Post-processing tool for ADAPT 5 |

AmigaFFH | Commodore Amiga File Format Handler |

aml | Adaptive Mixed LASSO |

ammistability | Additive Main Effects and Multiplicative Interaction Model Stability Parameters |

AMModels | Adaptive Management Model Manager |

AmmoniaConcentration | Un-Ionized Ammonia Concentration |

AMOEBA | A Multidirectional Optimum Ecotope-Based Algorithm |

AMORE | Artificial Neural Network Training and Simulating |

ampd | An Algorithm for Automatic Peak Detection in Noisy Periodic and Quasi-Periodic Signals |

AmpGram | Prediction of Antimicrobial Peptides |

ampir | Predict Antimicrobial Peptides |

AMPLE | Common Code for the 'AMPED' and 'PIMPLE' 'shiny' Apps for Stakeholder Engagement and Harvest Strategies |

AmpliconDuo | Statistical Analysis of Amplicon Data of the Same Sample to Identify Artefacts |

AMR | Antimicrobial Resistance Data Analysis |

amt | Animal Movement Tools |

AmyloGram | Prediction of Amyloid Proteins |

AnaCoDa | Analysis of Codon Data under Stationarity using a Bayesian Framework |

anacor | Simple and Canonical Correspondence Analysis |

analogsea | Interface to 'Digital Ocean' |

analogue | Analogue and Weighted Averaging Methods for Palaeoecology |

analogueExtra | Additional Functions for Use with the Analogue Package |

analysisPipelines | Compose Interoperable Analysis Pipelines & Put Them in Production |

analyz | Model Layer for Automatic Data Analysis via CSV File Interpretation |

AnalyzeFMRI | Functions for Analysis of fMRI Datasets Stored in the ANALYZE or NIFTI Format |

analyzer | Data Analysis and Automated R Notebook Generation |

anapuce | Tools for Microarray Data Analysis |

AncestryMapper | Assigning Ancestry Based on Population References |

AnchorRegression | Perform AnchorRegression |

anchors | Statistical analysis of surveys with anchoring vignettes |

AnDE | An extended Bayesian Learning Technique developed by Dr. Geoff Webb |

andrews | Andrews curves |

Andromeda | Asynchronous Disk-Based Representation of Massive Data |

andurinha | Make Spectroscopic Data Processing Easier |

anesrake | ANES Raking Implementation |

AnglerCreelSurveySimulation | Simulate a Bus Route Creel Survey of Anglers |

angstroms | Tools for 'ROMS' the Regional Ocean Modeling System |

aniDom | Inferring Dominance Hierarchies and Estimating Uncertainty |

anim.plots | Simple Animated Plots for R |

AnimalAPD | Compare Activity Patterns with Activity Probability Density (APD) |

animalEKF | Extended Kalman Filters for Animal Movement |

AnimalHabitatNetwork | Networks Characterising the Physical Configurations of Animal Habitats |

animalTrack | Animal track reconstruction for high frequency 2-dimensional (2D) or 3-dimensional (3D) movement data |

animaltracker | Animal Tracker |

animation | A Gallery of Animations in Statistics and Utilities to Create Animations |

animint2 | Animated Interactive Grammar of Graphics |

anipaths | Animation of Observed Trajectories Using Spline-Based Interpolation |

aniview | Animate Shiny and R Markdown Content when it Comes into View |

anMC | Compute High Dimensional Orthant Probabilities |

ANN2 | Artificial Neural Networks for Anomaly Detection |

anndata | 'anndata' for R |

AnnotationBustR | Extract Subsequences from GenBank Annotations |

AnnotLists | AnnotLists: A tool to annotate multiple lists from a specific annotation file |

AnnuityRIR | Annuity Random Interest Rates |

anocva | A Non-Parametric Statistical Test to Compare Clustering Structures |

ANOM | Analysis of Means |

anomalize | Tidy Anomaly Detection |

anomaly | Detecting Anomalies in Data |

anominate | Alpha-NOMINATE Ideal Point Estimator |

ANOVAIREVA | Interactive Document for Working with Analysis of Variance |

ANOVAreplication | Test ANOVA Replications by Means of the Prior Predictive p-Value |

ANOVAShiny | Interactive Document for Working with Analysis of Variance |

ANOVAShiny2 | Interactive Document for Working with Analysis of Variance |

anovir | Analysis of Virulence |

anscombiser | Create Datasets with Identical Summary Statistics |

AntAngioCOOL | Anti-Angiogenic Peptide Prediction |

antaresEditObject | Edit an 'Antares' Simulation |

antaresProcessing | 'Antares' Results Processing |

antaresRead | Import, Manipulate and Explore the Results of an 'Antares' Simulation |

antaresViz | Antares Visualizations |

anthro | Computation of the WHO Child Growth Standards |

AnthropMMD | An R Package for Smith's Mean Measure of Divergence (MMD) |

Anthropometry | Statistical Methods for Anthropometric Data |

anticlust | Subset Partitioning via Anticlustering |

antitrust | Tools for Antitrust Practitioners |

antiword | Extract Text from Microsoft Word Documents |

AntWeb | programmatic interface to the AntWeb |

anybadger | Create Custom Pipeline Badges |

anyflights | Query 'nycflights13'-Like Air Travel Data for Given Years and Airports |

anyLib | Install and Load Any Package from CRAN, Bioconductor or Github |

anytime | Anything to 'POSIXct' or 'Date' Converter |

aod | Analysis of Overdispersed Data |

aods3 | Analysis of Overdispersed Data using S3 Methods |

aof | Ontogenetic Shifts in Central-Place Foraging Insects |

aoos | Another Object Orientation System |

aopdata | Data from the 'Access to Opportunities Project (AOP)' |

Aoptbdtvc | A-Optimal Block Designs for Comparing Test Treatments with Controls |

aoristic | Generates Aoristic Probability Distributions |

aos | Animate on Scroll Library for 'shiny' |

AOV1R | Inference in the Balanced One-Way ANOVA Model with Random Factor |

apa | Format Outputs of Statistical Tests According to APA Guidelines |

ApacheLogProcessor | Process the Apache Web Server Log Files |

apaTables | Create American Psychological Association (APA) Style Tables |

apaText | Create R Markdown Text for Results in the Style of the American Psychological Association (APA) |

apc | Age-Period-Cohort Analysis |

APCanalysis | Analysis of Unreplicated Orthogonal Experiments using All Possible Comparisons |

apcf | Adapted Pair Correlation Function |

APCI | A New Age-Period-Cohort Model for Describing and Investigating Inter-Cohort Differences and Life Course Dynamics |

apcluster | Affinity Propagation Clustering |

aPCoA | Covariate Adjusted PCoA Plot |

apdesign | An Implementation of the Additive Polynomial Design Matrix |

ape | Analyses of Phylogenetics and Evolution |

apercu | Quick Look at your Data |

apex | Phylogenetic Methods for Multiple Gene Data |

apexcharter | Create Interactive Chart with the JavaScript 'ApexCharts' Library |

APFr | Multiple Testing Approach using Average Power Function (APF) and Bayes FDR Robust Estimation |

APfun | Geo-Processing Helper Functions |

aphid | Analysis with Profile Hidden Markov Models |

APIS | Auto-Adaptive Parentage Inference Software Tolerant to Missing Parents |

apisensr | Interface to 'episensr' for Sensitivity Analysis of Epidemiological Results |

aplore3 | Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd Ed., 2013) |

aplot | Decorate a 'ggplot' with Associated Information |

aplpack | Another Plot Package: 'Bagplots', 'Iconplots', 'Summaryplots', Slider Functions and Others |

APML0 | Augmented and Penalized Minimization Method L0 |

apng | Convert Png Files into Animated Png |

apollo | Tools for Choice Model Estimation and Application |

APPEstimation | Adjusted Prediction Model Performance Estimation |

appler | 'Apple App Store' and 'iTunes' Data Extraction |

applicable | A Compilation of Applicability Domain Methods |

AppliedPredictiveModeling | Functions and Data Sets for 'Applied Predictive Modeling' |

appnn | Amyloid Propensity Prediction Neural Network |

approximator | Bayesian Prediction of Complex Computer Codes |

approxmatch | Approximately Optimal Fine Balance Matching with Multiple Groups |

aprean3 | Datasets from Draper and Smith "Applied Regression Analysis" (3rd Ed., 1998) |

apricom | Tools for the a Priori Comparison of Regression Modelling Strategies |

aprof | Amdahl's Profiler, Directed Optimization Made Easy |

APSIMBatch | Analysis the output of Apsim software |

apsimx | Inspect, Read, Edit and Run 'APSIM' "Next Generation" and 'APSIM' Classic |

apsrtable | apsrtable model-output formatter for social science |

apt | Asymmetric Price Transmission |

aptg | Automatic Phylogenetic Tree Generator |

APtools | Average Positive Predictive Values (AP) for Binary Outcomes and Censored Event Times |

apTreeshape | Analyses of Phylogenetic Treeshape |

apyramid | Visualize Population Pyramids Aggregated by Age |

AQLSchemes | Retrieving Acceptance Sampling Schemes |

aqp | Algorithms for Quantitative Pedology |

AQuadtree | Confidentiality of Spatial Point Data |

AquaEnv | Integrated Development Toolbox for Aquatic Chemical Model Generation |

AR | Another Look at the Acceptance-Rejection Method |

ar.matrix | Simulate Auto Regressive Data from Precision Matricies |

arabic2kansuji | Convert Arabic Numerals to Kansuji |

arabicStemR | Arabic Stemmer for Text Analysis |

ArArRedux | Rigorous Data Reduction and Error Propagation of Ar40 / Ar39 Data |

arc | Association Rule Classification |

ARCensReg | Fitting Univariate Censored Linear Regression Model with Autoregressive Errors |

ArchaeoChron | Bayesian Modeling of Archaeological Chronologies |

ArchaeoPhases | Post-Processing of the Markov Chain Simulated by 'ChronoModel', 'Oxcal' or 'BCal' |

ArchaeoPhases.dataset | Data Sets for 'ArchaeoPhases' Vignettes |

archdata | Example Datasets from Archaeological Research |

archeofrag | Refitting and Stratigraphic Analysis in Archeology |

archetyper | An Archetype for Data Mining and Data Science Projects |

archetypes | Archetypal Analysis |

aRchi | Quantitative Structural Model ('QSM') Treatment for Tree Architecture |

archiDART | Plant Root System Architecture Analysis Using DART and RSML Files |

archiveRetriever | Retrieve Archived Web Pages from the 'Internet Archive' |

archivist | Tools for Storing, Restoring and Searching for R Objects |

archivist.github | Tools for Archiving, Managing and Sharing R Objects via GitHub |

ArCo | Artificial Counterfactual Package |

ARCokrig | Autoregressive Cokriging Models for Multifidelity Codes |

arcos | Load ARCOS Prescription Data Prepared by the Washington Post |

arcpullr | Pull Data from an 'ArcGIS REST' API |

arctools | Processing and Physical Activity Summaries of Minute Level Activity Data |

ArDec | Time series autoregressive-based decomposition |

ARDL | ARDL, ECM and Bounds-Test for Cointegration |

areabiplot | Area Biplot |

areal | Areal Weighted Interpolation |

arealDB | Harmonise and Integrate Heterogeneous Areal Data |

areaplot | Plot Stacked Areas and Confidence Bands as Filled Polygons |

arena2r | Plots, Summary Statistics and Tools for Arena Simulation Users |

arenar | Arena for the Exploration and Comparison of any ML Models |

arfima | Fractional ARIMA (and Other Long Memory) Time Series Modeling |

argo | Accurate Estimation of Influenza Epidemics using Google Search Data |

argon2 | Secure Password Hashing |

argonDash | Argon Shiny Dashboard Template |

argonR | R Interface to Argon HTML Design |

argosfilter | Argos locations filter |

argparse | Command Line Optional and Positional Argument Parser |

argparser | Command-Line Argument Parser |

ArgumentCheck | Improved Communication to Users with Respect to Problems in Function Arguments |

ARHT | Adaptable Regularized Hotelling's T^2 Test for High-Dimensional Data |

ari | Automated R Instructor |

ARIbrain | All-Resolution Inference |

aricode | Efficient Computations of Standard Clustering Comparison Measures |

ariExtra | Tools for Creating Automated Courses |

arkdb | Archive and Unarchive Databases Using Flat Files |

arkhe | Representation of Archaeological Data |

arm | Data Analysis Using Regression and Multilevel/Hierarchical Models |

armada | A Statistical Methodology to Select Covariates in High-Dimensional Data under Dependence |

armspp | Adaptive Rejection Metropolis Sampling (ARMS) via 'Rcpp' |

arnie | "Arnie" box office records 1982-2014 |

AROC | Covariate-Adjusted Receiver Operating Characteristic Curve Inference |

aroma.affymetrix | Analysis of Large Affymetrix Microarray Data Sets |

aroma.apd | A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated] |

aroma.cn | Copy-Number Analysis of Large Microarray Data Sets |

aroma.core | Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework |

Arothron | Geometric Morphometric Methods and Virtual Anthropology Tools |

ARpLMEC | Fitting Autoregressive Censored Mixed-Effects Models |

ARPobservation | Tools for Simulating Direct Behavioral Observation Recording Procedures Based on Alternating Renewal Processes |

arpr | Advanced R Pipes |

aRpsDCA | Arps Decline Curve Analysis in R |

arrangements | Fast Generators and Iterators for Permutations, Combinations, Integer Partitions and Compositions |

arrApply | Apply a Function to a Margin of an Array |

arrayhelpers | Convenience Functions for Arrays |

arrow | Integration to 'Apache' 'Arrow' |

ars | Adaptive Rejection Sampling |

arse | Area of Resilience to Stress Event |

arsenal | An Arsenal of 'R' Functions for Large-Scale Statistical Summaries |

ART | Aligned Rank Transform for Nonparametric Factorial Analysis |

artfima | ARTFIMA Model Estimation |

ARTool | Aligned Rank Transform |

ARTP2 | Pathway and Gene-Level Association Test |

arules | Mining Association Rules and Frequent Itemsets |

arulesCBA | Classification Based on Association Rules |

arulesNBMiner | Mining NB-Frequent Itemsets and NB-Precise Rules |

arulesSequences | Mining Frequent Sequences |

arulesViz | Visualizing Association Rules and Frequent Itemsets |

aRxiv | Interface to the arXiv API |

asaur | Data Sets for "Applied Survival Analysis Using R"" |

asbio | A Collection of Statistical Tools for Biologists |

ascii | Export R Objects to Several Markup Languages |

asciicast | Create 'Ascii' Screen Casts from R Scripts |

asciichartr | Lightweight ASCII Line Graphs |

asciiruler | Render an ASCII Ruler |

asciiSetupReader | Reads Fixed-Width ASCII Data Files (.txt or .dat) that Have Accompanying Setup Files (.sps or .sas) |

asd | Simulations for Adaptive Seamless Designs |

asdreader | Reading ASD Binary Files in R |

ASGS.foyer | Interface to the Australian Statistical Geography Standard |

ash | David Scott's ASH Routines |

ashr | Methods for Adaptive Shrinkage, using Empirical Bayes |

asht | Applied Statistical Hypothesis Tests |

AsioHeaders | 'Asio' C++ Header Files |

ASIP | Automated Satellite Image Processing |

askpass | Safe Password Entry for R, Git, and SSH |

aslib | Interface to the Algorithm Selection Benchmark Library |

ASMap | Linkage Map Construction using the MSTmap Algorithm |

asnipe | Animal Social Network Inference and Permutations for Ecologists |

aspace | A collection of functions for estimating centrographic statistics and computational geometries for spatial point patterns |

ASPBay | Bayesian Inference on Causal Genetic Variants using Affected Sib-Pairs Data |

aSPC | An Adaptive Sum of Powered Correlation Test (aSPC) for Global Association Between Two Random Vectors |

aspect | A General Framework for Multivariate Analysis with Optimal Scaling |

aspi | Analysis of Symmetry of Parasitic Infections |

aSPU | Adaptive Sum of Powered Score Test |

asremlPlus | Augments 'ASReml-R' in Fitting Mixed Models and Packages Generally in Exploring Prediction Differences |

ASSA | Applied Singular Spectrum Analysis (ASSA) |

assert | Validate Function Arguments |

assertable | Verbose Assertions for Tabular Data (Data.frames and Data.tables) |

assertive | Readable Check Functions to Ensure Code Integrity |

assertive.base | A Lightweight Core of the 'assertive' Package |

assertive.code | Assertions to Check Properties of Code |

assertive.data | Assertions to Check Properties of Data |

assertive.data.uk | Assertions to Check Properties of Strings |

assertive.data.us | Assertions to Check Properties of Strings |

assertive.datetimes | Assertions to Check Properties of Dates and Times |

assertive.files | Assertions to Check Properties of Files |

assertive.matrices | Assertions to Check Properties of Matrices |

assertive.models | Assertions to Check Properties of Models |

assertive.numbers | Assertions to Check Properties of Numbers |

assertive.properties | Assertions to Check Properties of Variables |

assertive.reflection | Assertions for Checking the State of R |

assertive.sets | Assertions to Check Properties of Sets |

assertive.strings | Assertions to Check Properties of Strings |

assertive.types | Assertions to Check Types of Variables |

assertr | Assertive Programming for R Analysis Pipelines |

assertthat | Easy Pre and Post Assertions |

AssetCorr | Estimating Asset Correlations from Default Data |

AssetPricing | Optimal Pricing of Assets with Fixed Expiry Date |

assignPOP | Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework |

assignR | Infer Geographic Origin from Isotopic Data |

assist | A Suite of R Functions Implementing Spline Smoothing Techniques |

ASSISTant | Adaptive Subgroup Selection in Group Sequential Trials |

AssocAFC | Allele Frequency Comparison |

assocInd | Implements New and Existing Association Indices for Constructing Animal Social Networks |

ASSOCShiny | Interactive Document for Working with Association Rule Mining Analysis |

AssocTests | Genetic Association Studies |

assortnet | Calculate the Assortativity Coefficient of Weighted and Binary Networks |

AssotesteR | Statistical Tests for Genetic Association Studies |

AST | Age-Spatial-Temporal Model |

aster | Aster Models |

aster2 | Aster Models |

asteRisk | Computation of Satellite Position |

AsthmaNHANES | Asthma Data Sets from NHANES |

astrochron | A Computational Tool for Astrochronology |

astrodatR | Astronomical Data |

astroFns | Astronomy: time and position functions, misc. utilities |

astrolibR | Astronomy Users Library |

astsa | Applied Statistical Time Series Analysis |

asus | Adaptive SURE Thresholding Using Side Information |

asVPC | Average Shifted Visual Predictive Checks |

AsyK | Kernel Density Estimation and Selection of Optimum Bandwidth |

asymLD | Asymmetric Linkage Disequilibrium (ALD) for Polymorphic Genetic Data |

asymmetry | Multidimensional Scaling of Asymmetric Data |

asymmetry.measures | Asymmetry Measures for Probability Density Functions |

asympTest | A Simple R Package for Classical Parametric Statistical Tests and Confidence Intervals in Large Samples |

asymptor | Estimate Asymptomatic Cases via Capture/Recapture Methods |

AsynchLong | Regression Analysis of Sparse Asynchronous Longitudinal Data |

asypow | Calculate Power Utilizing Asymptotic Likelihood Ratio Methods |

ata | Automated Test Assembly |

atable | Create Tables for Reporting Clinical Trials |

ATAforecasting | Automatic Time Series Analysis and Forecasting Using the Ata Method |

atakrig | Area-to-Area Kriging |

ATE | Inference for Average Treatment Effects using Covariate Balancing |

atlas | Stanford 'ATLAS' Search Engine API |

atmcmc | Automatically Tuned Markov Chain Monte Carlo |

ATmet | Advanced Tools for Metrology |

atmopt | Analysis-of-Marginal-Tail-Means |

AtmRay | Acoustic Traveltime Calculations for 1-D Atmospheric Models |

ATR | Alternative Tree Representation |

aTSA | Alternative Time Series Analysis |

atsd | Support Querying Axibase Time-Series Database |

attachment | Deal with Dependencies |

attempt | Tools for Defensive Programming |

attenuation | Correcting for Attenuation Due to Measurement Error |

attrib | Attributable Burden of Disease |

AUC | Threshold independent performance measures for probabilistic classifiers |

aucm | AUC Maximization |

AUCRF | Variable Selection with Random Forest and the Area Under the Curve |

auctestr | Statistical Testing for AUC Data |

auctionr | Estimate First-Price Auction Model |

audio | Audio Interface for R |

audiolyzR | audiolyzR: Give your data a listen |

audiometry | Standard Conform Pure Tone Audiometry (PTA) Plots |

audit | Bounds for Accounting Populations |

auditor | Model Audit - Verification, Validation, and Error Analysis |

augmentedRCBD | Analysis of Augmented Randomised Complete Block Designs |

AugmenterR | Data Augmentation for Machine Learning on Tabular Data |

augSIMEX | Analysis of Data with Mixed Measurement Error and Misclassification in Covariates |

auk | eBird Data Extraction and Processing in R |

aurelius | Generates PFA Documents from R Code and Optionally Runs Them |

AurieLSHGaussian | Creates a Neighbourhood Using Locality Sensitive Hashing for Gaussian Projections |

auRoc | Various Methods to Estimate the AUC |

AUtests | Approximate Unconditional and Permutation Tests |

auth0 | Secure Authentication in Shiny with Auth0 |

auto.pca | Automatic Variable Reduction Using Principal Component Analysis |

autoBagging | Learning to Rank Bagging Workflows with Metalearning |

autocogs | Automatic Cognostic Summaries |

autoCovariateSelection | Automated Covariate Selection Using HDPS Algorithm |

AutoDeskR | An Interface to the 'AutoDesk' 'API' Platform |

autoencoder | Sparse Autoencoder for Automatic Learning of Representative Features from Unlabeled Data |

autoFRK | Automatic Fixed Rank Kriging |

autoimage | Multiple Heat Maps for Projected Coordinates |

autokeras | R Interface to 'AutoKeras' |

automagic | Automagically Document and Install Packages Necessary to Run R Code |

automap | Automatic interpolation package |

automl | Deep Learning with Metaheuristic |

autoMrP | Improving MrP with Ensemble Learning |

automultinomial | Models for Spatially Correlated Data |

AutoPipe | Automated Transcriptome Classifier Pipeline: Comprehensive Transcriptome Analysis |

autoplotly | Automatic Generation of Interactive Visualizations for Statistical Results |

Autoplotprotein | Development of Visualization Tools for Protein Sequence |

AutoregressionMDE | Minimum Distance Estimation in Autoregressive Model |

AutoSEARCH | General-to-Specific (GETS) Modelling |

Autoseed | Retrieve Disease-Related Genes from Public Sources |

autoshiny | Automatic Transformation of an 'R' Function into a 'shiny' App |

AutoStepwiseGLM | Builds Stepwise GLMs via Train and Test Approach |

autostsm | Automatic Structural Time Series Models |

autota | Auto TA |

autothresholdr | An R Port of the 'ImageJ' Plugin 'Auto Threshold' |

autoTS | Automatic Model Selection and Prediction for Univariate Time Series |

av | Working with Audio and Video in R |

available | Check if the Title of a Package is Available, Appropriate and Interesting |

avar | Allan Variance |

averisk | Calculation of Average Population Attributable Fractions and Confidence Intervals |

aVirtualTwins | Adaptation of Virtual Twins Method from Jared Foster |

avocado | Weekly Hass Avocado Sales Summary |

AWAPer | Catchment Area Weighted Climate Data Anywhere in Australia |

aweek | Convert Dates to Arbitrary Week Definitions |

aweSOM | Interactive Self-Organizing Maps |

AWR | 'AWS' Java 'SDK' for R |

AWR.Athena | 'AWS' Athena 'DBI' Wrapper |

AWR.Kinesis | Amazon 'Kinesis' Consumer Application for Stream Processing |

AWR.KMS | A Simple Client to the 'AWS' Key Management Service |

aws | Adaptive Weights Smoothing |

aws.alexa | Client for the Amazon Alexa Web Information Services API |

aws.comprehend | Client for 'AWS Comprehend' |

aws.ec2metadata | Get EC2 Instance Metadata |

aws.ecx | Communicating with AWS EC2 and ECS using AWS REST APIs |

aws.iam | AWS IAM Client Package |

aws.kms | 'AWS Key Management Service' Client Package |

aws.lambda | AWS Lambda Client Package |

aws.polly | Client for AWS Polly |

aws.s3 | 'AWS S3' Client Package |

aws.signature | Amazon Web Services Request Signatures |

aws.transcribe | Client for 'AWS Transcribe' |

aws.translate | Client for 'AWS Translate' |

awsMethods | Class and Methods Definitions for Packages 'aws', 'adimpro', 'fmri', 'dwi' |

aziztest | Novel Statistical Test for Aberration Enrichment |

AzureAuth | Authentication Services for Azure Active Directory |

AzureCognitive | Interface to Azure Cognitive Services |

AzureContainers | Interface to 'Container Instances', 'Docker Registry' and 'Kubernetes' in 'Azure' |

AzureCosmosR | Interface to the 'Azure Cosmos DB' 'NoSQL' Database Service |

AzureGraph | Simple Interface to 'Microsoft Graph' |

AzureKeyVault | Key and Secret Management in 'Azure' |

AzureKusto | Interface to 'Kusto'/'Azure Data Explorer' |

azuremlsdk | Interface to the 'Azure Machine Learning' 'SDK' |

AzureQstor | Interface to 'Azure Queue Storage' |

AzureRMR | Interface to 'Azure Resource Manager' |

AzureStor | Storage Management in 'Azure' |

AzureTableStor | Interface to the Table Storage Service in 'Azure' |

AzureVision | Interface to Azure Computer Vision Services |

AzureVM | Virtual Machines in 'Azure' |

AzureVMmetadata | Interface to Azure Virtual Machine Instance Metadata |

b6e6rl | Adaptive differential evolution, b6e6rl variant |

babar | Bayesian Bacterial Growth Curve Analysis in R |

babel | Ribosome Profiling Data Analysis |

babelwhale | Talking to 'Docker' and 'Singularity' Containers |

babette | Control 'BEAST2' |

BaBooN | Bayesian Bootstrap Predictive Mean Matching - Multiple and Single Imputation for Discrete Data |

babsim.hospital | Bartz & Bartz Simulation Hospital |

babynames | US Baby Names 1880-2017 |

BacArena | Modeling Framework for Cellular Communities in their Environments |

BACCO | Bayesian Analysis of Computer Code Output (BACCO) |

BACCT | Bayesian Augmented Control for Clinical Trials |

bacistool | Bayesian Classification and Information Sharing (BaCIS) Tool for the Design of Multi-Group Phase II Clinical Trials |

backbone | Extracts the Backbone from Weighted Graphs |

backpipe | Backward Pipe (Right-to-Left) Operator |

backports | Reimplementations of Functions Introduced Since R-3.0.0 |

backShift | Learning Causal Cyclic Graphs from Unknown Shift Interventions |

backtest | Exploring Portfolio-Based Conjectures About Financial Instruments |

bacondecomp | Goodman-Bacon Decomposition |

BACprior | Choice of the Hyperparameter Omega in the Bayesian Adjustment for Confounding (BAC) Algorithm |

bacr | Bayesian Adjustment for Confounding |

badgecreatr | Create Badges for 'Travis', 'Repostatus' 'Codecov.io' Etc in Github Readme |

badger | Badge for R Package |

BAEssd | Bayesian Average Error approach to Sample Size Determination |

baggedcv | Bagged Cross-Validation for Kernel Density Bandwidth Selection |

baggr | Bayesian Aggregate Treatment Effects |

BAGofT | A Binary Regression Adaptive Goodness-of-Fit Test (BAGofT) |

baguette | Efficient Model Functions for Bagging |

bahc | Filter Covariance and Correlation Matrices with Bootstrapped-Averaged Hierarchical Ansatz |

bain | Bayes Factors for Informative Hypotheses |

baitmet | Library Driven Compound Profiling in Gas Chromatography - Mass Spectrometry Data |

balance | Visualize Balances of Compositional Data |

BalanceCheck | Balance Check for Multiple Covariates in Matched Observational Studies |

BalancedSampling | Balanced and Spatially Balanced Sampling |

BALCONY | Better ALignment CONsensus analYsis |

BALD | Robust Loss Development Using MCMC |

Ball | Statistical Inference and Sure Independence Screening via Ball Statistics |

BALLI | Expression RNA-Seq Data Analysis Based on Linear Mixed Model |

BallMapper | The Ball Mapper Algorithm |

BaM | Functions and Datasets for "Bayesian Methods: A Social and Behavioral Sciences Approach" |

bama | High Dimensional Bayesian Mediation Analysis |

BAMBI | Bivariate Angular Mixture Models |

bamboo | Protein Secondary Structure Prediction Using the Bamboo Method |

bamdit | Bayesian Meta-Analysis of Diagnostic Test Data |

bamlss | Bayesian Additive Models for Location, Scale, and Shape (and Beyond) |

BAMMtools | Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees |

bamp | Bayesian Age-Period-Cohort Modeling and Prediction |

bandit | Functions for simple A/B split test and multi-armed bandit analysis |

bang | Bayesian Analysis, No Gibbs |

bannerCommenter | Make Banner Comments with a Consistent Format |

BANOVA | Hierarchical Bayesian ANOVA Models |

banter | BioAcoustic EveNT ClassifiER |

banxicoR | Download Data from the Bank of Mexico |

bapred | Batch Effect Removal and Addon Normalization (in Phenotype Prediction using Gene Data) |

BaPreStoPro | Bayesian Prediction of Stochastic Processes |

BarBorGradient | Function Minimum Approximator |

barcode | Barcode distribution plots |

baRcodeR | Label Creation for Tracking and Collecting Data from Biological Samples |

BarcodingR | Species Identification using DNA Barcodes |

bardr | Complete Works of William Shakespeare in Tidy Format |

BARIS | Access and Import Data from the French Open Data Portal |

Barnard | Barnard's Unconditional Test |

barplot3d | Create 3D Barplots |

barsurf | Contour Plots, 3D Plots, Vector Fields and Heatmaps |

BART | Bayesian Additive Regression Trees |

bartBMA | Bayesian Additive Regression Trees using Bayesian Model Averaging |

bartCause | Causal Inference using Bayesian Additive Regression Trees |

bartMachine | Bayesian Additive Regression Trees |

bartMachineJARs | bartMachine JARs |

baRulho | Quantifying Habitat-Induced Acoustic Signal Degradation |

Barycenter | Regularized Wasserstein Distances and Barycenters |

BAS | Bayesian Variable Selection and Model Averaging using Bayesian Adaptive Sampling |

basad | Bayesian Variable Selection with Shrinking and Diffusing Priors |

base.rms | Convert Regression Between Base Function and 'rms' Package |

base2grob | Convert Base Plot to 'grob' Object |

base64 | Base64 Encoder and Decoder |

base64enc | Tools for base64 encoding |

base64url | Fast and URL-Safe Base64 Encoder and Decoder |

baseballDBR | Sabermetrics and Advanced Baseball Statistics |

basecamb | Utilities for Streamlined Data Import, Imputation and Modelling |

baseflow | Computes Hydrograph Separation |

basefun | Infrastructure for Computing with Basis Functions |

baseline | Baseline Correction of Spectra |

BaseSet | Working with Sets the Tidy Way |

basetheme | Themes for Base Graphics Plots |

basf | Plot Simple Features with 'base' Sensibilities |

basicMCMCplots | Trace Plots, Density Plots and Chain Comparisons for MCMC Samples |

basicspace | Recovering a Basic Space from Issue Scales |

basictabler | Construct Rich Tables for Output to 'HTML'/'Excel' |

basicTrendline | Add Trendline and Confidence Interval of Basic Regression Models to Plot |

basifoR | Retrieval and Processing of the Spanish National Forest Inventory |

BASiNET | Classification of RNA Sequences using Complex Network Theory |

BASIX | BASIX: An efficient C/C++ toolset for R |

BasketballAnalyzeR | Analysis and Visualization of Basketball Data |

BASS | Bayesian Adaptive Spline Surfaces |

BaSTA | Age-Specific Survival Analysis from Incomplete Capture-Recapture/Recovery Data |

bastah | Big Data Statistical Analysis for High-Dimensional Models |

BAT | Biodiversity Assessment Tools |

batata | Managing Packages Removal and Installation |

batch | Batching Routines in Parallel and Passing Command-Line Arguments to R |

BatchExperiments | Statistical Experiments on Batch Computing Clusters |

BatchGetSymbols | Downloads and Organizes Financial Data for Multiple Tickers |

BatchJobs | Batch Computing with R |

batchmeans | Consistent Batch Means Estimation of Monte Carlo Standard Errors |

batchr | Batch Process Files |

batchscr | Batch Script Helpers |

batchtools | Tools for Computation on Batch Systems |

BaTFLED3D | Bayesian Tensor Factorization Linked to External Data |

batman | Convert Categorical Representations of Logicals to Actual Logicals |

batteryreduction | An R Package for Data Reduction by Battery Reduction |

BAwiR | Analysis of Basketball Data |

baycn | Bayesian Inference for Causal Networks |

bayefdr | Bayesian Estimation and Optimisation of Expected False Discovery Rate |

bayes4psy | User Friendly Bayesian Data Analysis for Psychology |

bayesAB | Fast Bayesian Methods for AB Testing |

bayesammi | Bayesian Estimation of the Additive Main Effects and Multiplicative Interaction Model |

bayesanova | Bayesian Inference in the Analysis of Variance via Markov Chain Monte Carlo in Gaussian Mixture Models |

BayesARIMAX | Bayesian Estimation of ARIMAX Model |

BayesBEKK | Bayesian Estimation of Bivariate Volatility Model |

BayesBinMix | Bayesian Estimation of Mixtures of Multivariate Bernoulli Distributions |

bayesbio | Miscellaneous Functions for Bioinformatics and Bayesian Statistics |

bayesboot | An Implementation of Rubin's (1981) Bayesian Bootstrap |

BayesBP | Bayesian Estimation using Bernstein Polynomial Fits Rate Matrix |

bayesbr | Beta Regression on a Bayesian Model |

BayesCombo | Bayesian Evidence Combination |

BayesComm | Bayesian Community Ecology Analysis |

bayescopulareg | Bayesian Copula Regression |

bayescount | Power Calculations and Bayesian Analysis of Count Distributions and FECRT Data using MCMC |

BayesCR | Bayesian Analysis of Censored Regression Models Under Scale Mixture of Skew Normal Distributions |

bayesCT | Simulation and Analysis of Adaptive Bayesian Clinical Trials |

BayesCTDesign | Two Arm Bayesian Clinical Trial Design with and Without Historical Control Data |

BayesDA | Functions and Datasets for the book "Bayesian Data Analysis" |

bayesDccGarch | The Bayesian Dynamic Conditional Correlation GARCH Model |

bayesdfa | Bayesian Dynamic Factor Analysis (DFA) with 'Stan' |

bayesdistreg | Bayesian Distribution Regression |

bayesDP | Tools for the Bayesian Discount Prior Function |

BayesESS | Determining Effective Sample Size |

BayesFactor | Computation of Bayes Factors for Common Designs |

BayesFM | Bayesian Inference for Factor Modeling |

bayesforecast | Bayesian Time Series Modeling with Stan |

bayesGAM | Fit Multivariate Response Generalized Additive Models using Hamiltonian Monte Carlo |

bayesGARCH | Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations |

BayesGESM | Bayesian Analysis of Generalized Elliptical Semi-Parametric Models and Flexible Measurement Error Models |

BayesGOF | Bayesian Modeling via Frequentist Goodness-of-Fit |

BayesGPfit | Fast Bayesian Gaussian Process Regression Fitting |

BayesGWQS | Bayesian Grouped Weighted Quantile Sum Regression |

bayesian | Bindings for Bayesian TidyModels |

BayesianAnimalTracker | Bayesian Melding of GPS and DR Path for Animal Tracking |

bayesianETAS | Bayesian Estimation of the ETAS Model for Earthquake Occurrences |

BayesianFROC | FROC Analysis by Bayesian Approaches |

Bayesiangammareg | Bayesian Gamma Regression: Joint Mean and Shape Modeling |

BayesianGLasso | Bayesian Graphical Lasso |

BayesianLaterality | Predict Brain Asymmetry Based on Handedness and Dichotic Listening |

BayesianNetwork | Bayesian Network Modeling and Analysis |

BayesianPower | Sample Size and Power for Comparing Inequality Constrained Hypotheses |

BayesianReasoning | Plot Positive and Negative Predictive Values for Medical Tests |

BayesianTools | General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics |

bayesImageS | Bayesian Methods for Image Segmentation using a Potts Model |

BayesLCA | Bayesian Latent Class Analysis |

bayesLife | Bayesian Projection of Life Expectancy |

bayeslincom | Linear Combinations of Bayesian Posterior Samples |

BayesLN | Bayesian Inference for Log-Normal Data |

BayesLogit | PolyaGamma Sampling |

bayesloglin | Bayesian Analysis of Contingency Table Data |

bayeslongitudinal | Adjust Longitudinal Regression Models Using Bayesian Methodology |

bayesm | Bayesian Inference for Marketing/Micro-Econometrics |

BayesMallows | Bayesian Preference Learning with the Mallows Rank Model |

BayesMassBal | Bayesian Data Reconciliation of Separation Processes |

bayesmeta | Bayesian Random-Effects Meta-Analysis |

BayesMFSurv | Bayesian Misclassified-Failure Survival Model |

bayesmix | Bayesian Mixture Models with JAGS |

BayesMixSurv | Bayesian Mixture Survival Models using Additive Mixture-of-Weibull Hazards, with Lasso Shrinkage and Stratification |

bayesmove | Non-Parametric Bayesian Analyses of Animal Movement |

BayesMRA | Bayesian Multi-Resolution Gaussian Process Approximations |

BayesNetBP | Bayesian Network Belief Propagation |

BayesNI | BayesNI: Bayesian Testing Procedure for Noninferiority with Binary Endpoints |

BayesNSGP | Bayesian Analysis of Non-Stationary Gaussian Process Models |

BayesPieceHazSelect | Variable Selection in a Hierarchical Bayesian Model for a Hazard Function |

BayesPiecewiseICAR | Hierarchical Bayesian Model for a Hazard Function |

bayesplot | Plotting for Bayesian Models |

bayesPop | Probabilistic Population Projection |

BayesPostEst | Generate Postestimation Quantities for Bayesian MCMC Estimation |

bayespref | Hierarchical Bayesian analysis of ecological count data |

BayesProject | Fast Projection Direction for Multivariate Changepoint Detection |

bayesQR | Bayesian Quantile Regression |

bayesreg | Bayesian Regression Models with Global-Local Shrinkage Priors |

Bayesrel | Bayesian Reliability Estimation |

BayesReversePLLH | Fits the Bayesian Piecewise Linear Log-Hazard Model |

BayesRS | Bayes Factors for Hierarchical Linear Models with Continuous Predictors |

bayess | Bayesian Essentials with R |

BayesS5 | Bayesian Variable Selection Using Simplified Shotgun Stochastic Search with Screening (S5) |

BayesSAE | Bayesian Analysis of Small Area Estimation |

BayesSampling | Bayes Linear Estimators for Finite Population |

BayesSenMC | Different Models of Posterior Distributions of Adjusted Odds Ratio |

BayesSpec | Bayesian Spectral Analysis Techniques |

BayesSPsurv | Bayesian Spatial Split Population Survival Model |

BayesSUR | Bayesian Seemingly Unrelated Regression |

bayesSurv | Bayesian Survival Regression with Flexible Error and Random Effects Distributions |

BayesSurvival | Bayesian Survival Analysis for Right Censored Data |

bayest | Effect Size Targeted Bayesian Two-Sample t-Tests via Markov Chain Monte Carlo in Gaussian Mixture Models |

bayestestR | Understand and Describe Bayesian Models and Posterior Distributions |

bayesTFR | Bayesian Fertility Projection |

BayesTree | Bayesian Additive Regression Trees |

BayesTreePrior | Bayesian Tree Prior Simulation |

BayesTwin | Bayesian Analysis of Item-Level Twin Data |

BayesValidate | BayesValidate Package |

BayesVarSel | Bayes Factors, Model Choice and Variable Selection in Linear Models |

bayesvl | Visually Learning the Graphical Structure of Bayesian Networks and Performing MCMC with 'Stan' |

BayesX | R Utilities Accompanying the Software Package BayesX |

BayesXsrc | R Package Distribution of the BayesX C++ Sources |

bayfoxr | Global Bayesian Foraminifera Core Top Calibration |

BayHaz | R Functions for Bayesian Hazard Rate Estimation |

BayLum | Chronological Bayesian Models Integrating Optically Stimulated Luminescence and Radiocarbon Age Dating |

baymedr | Computation of Bayes Factors for Common Biomedical Designs |

BaySIC | Bayesian Analysis of Significantly Mutated Genes in Cancer |

baystability | Bayesian Stability Analysis of Genotype by Environment Interaction (GEI) |

BAYSTAR | On Bayesian analysis of Threshold autoregressive model (BAYSTAR) |

baytrends | Long Term Water Quality Trend Analysis |

bazar | Miscellaneous Basic Functions |

BB | Solving and Optimizing Large-Scale Nonlinear Systems |

BBcor | Bayesian Bootstrapping Correlations |

bbdetection | Identification of Bull and Bear States of the Market |

bbefkr | Bayesian bandwidth estimation and semi-metric selection for the functional kernel regression with unknown error density |

bbemkr | Bayesian bandwidth estimation for multivariate kernel regression with Gaussian error |

BBEST | Bayesian Estimation of Incoherent Neutron Scattering Backgrounds |

BBI | Benthic Biotic Indices Calculation from Composition Data |

bbl | Boltzmann Bayes Learner |

BBmisc | Miscellaneous Helper Functions for B. Bischl |

bbmle | Tools for General Maximum Likelihood Estimation |

BBMM | Brownian bridge movement model |

BBMV | Models for Continuous Traits Evolving in Macroevolutionary Landscapes of any Shape |

bbo | Biogeography-Based Optimization |

bbotk | Black-Box Optimization Toolkit |

BBRecapture | Bayesian Behavioural Capture-Recapture Models |

bbreg | Bessel and Beta Regressions via Expectation-Maximization Algorithm for Continuous Bounded Data |

bbricks | Bayesian Methods and Graphical Model Structures for Statistical Modeling |

bbsBayes | Hierarchical Bayesian Analysis of North American BBS Data |

bbw | Blocked Weighted Bootstrap |

bc3net | Gene Regulatory Network Inference with Bc3net |

BCA | Business and Customer Analytics |

BCA1SG | Block Coordinate Ascent with One-Step Generalized Rosen Algorithm |

bcaboot | Bias Corrected Bootstrap Confidence Intervals |

BCBCSF | Bias-Corrected Bayesian Classification with Selected Features |

bcc | Beta Control Charts |

BCC1997 | Calculation of Option Prices Based on a Universal Solution |

bccp | Bias Correction under Censoring Plan |

bcdata | Search and Retrieve Data from the BC Data Catalogue |

BCDating | Business Cycle Dating and Plotting Tools |

BcDiag | Diagnostics Plots for Bicluster Data |

BCE | Bayesian composition estimator: estimating sample (taxonomic) composition from biomarker data |

BCEA | Bayesian Cost Effectiveness Analysis |

BCEE | The Bayesian Causal Effect Estimation Algorithm |

BCellMA | B Cell Receptor Somatic Hyper Mutation Analysis |

bcf | Causal Inference for a Binary Treatment and Continuous Outcome using Bayesian Causal Forests |

bcfrailph | Semiparametric Bivariate Correlated Frailty Model |

bcfrailphdv | Bivariate Correlated Frailty Models with Varied Variances |

bcgam | Bayesian Constrained Generalised Linear Models |

BCgee | Bias-Corrected Estimates for Generalized Linear Models for Dependent Data |

BCHM | Clinical Trial Calculation Based on BCHM Design |

Bchron | Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase Modelling |

BClustLonG | A Dirichlet Process Mixture Model for Clustering Longitudinal Gene Expression Data |

bcmaps | Map Layers and Spatial Utilities for British Columbia |

bcmixed | Mixed Effect Model with the Box-Cox Transformation |

bcp | Bayesian Analysis of Change Point Problems |

bcpa | Behavioral change point analysis of animal movement |

bcpmeta | Bayesian Multiple Changepoint Detection Using Metadata |

BCRA | Breast Cancer Risk Assessment |

bcrm | Bayesian Continual Reassessment Method for Phase I Dose-Escalation Trials |

bcROCsurface | Bias-Corrected Methods for Estimating the ROC Surface of Continuous Diagnostic Tests |

bcrypt | 'Blowfish' Password Hashing Algorithm |

BCSub | A Bayesian Semiparametric Factor Analysis Model for Subtype Identification (Clustering) |

BCT | Bayesian Context Trees for Discrete Time Series |

bcTSNE | Projected t-SNE for Batch Correction |

bcv | Cross-Validation for the SVD (Bi-Cross-Validation) |

bda | Binned Data Analysis |

bdchecks | Biodiversity Data Checks |

bdclean | A User-Friendly Biodiversity Data Cleaning App for the Inexperienced R User |

bdDwC | Darwinizer: Darwin Core (DwC) Field Names Standardization |

bde | Bounded Density Estimation |

BDEsize | Efficient Determination of Sample Size in Balanced Design of Experiments |

BDgraph | Bayesian Structure Learning in Graphical Models using Birth-Death MCMC |

bdl | Interface and Tools for 'BDL' API |

bdlp | Transparent and Reproducible Artificial Data Generation |

bdots | Bootstrapped Differences of Time Series |

BDP2 | Bayesian Adaptive Designs for Phase II Trials with Binary Endpoint |

bdpar | Big Data Preprocessing Architecture |

bdpopt | Optimisation of Bayesian Decision Problems |

bdpv | Inference and Design for Predictive Values in Diagnostic Tests |

bdribs | Bayesian Detection of Potential Risk Using Inference on Blinded Safety Data |

bdscale | Remove Weekends and Holidays from ggplot2 Axes |

bdsmatrix | Routines for Block Diagonal Symmetric Matrices |

bdvis | Biodiversity Data Visualizations |

BDWreg | Bayesian Inference for Discrete Weibull Regression |

bdynsys | Bayesian Dynamical System Model |

BE | Bioequivalence Study Data Analysis |

bea.R | Bureau of Economic Analysis API |

BEACH | Biometric Exploratory Analysis Creation House |

beadarrayFilter | Bead filtering for Illumina bead arrays |

beadplexr | Analysis of Multiplex Cytometric Bead Assays |

beakr | A Minimalist Web Framework for R |

beam | Fast Bayesian Inference in Large Gaussian Graphical Models |

beanplot | Visualization via Beanplots (like Boxplot/Stripchart/Violin Plot) |

beanz | Bayesian Analysis of Heterogeneous Treatment Effect |

beast | Bayesian Estimation of Change-Points in the Slope of Multivariate Time-Series |

beastier | Call 'BEAST2' |

BeastJar | JAR Dependency for MCMC Using 'BEAST' |

beautier | 'BEAUti' from R |

BED | Biological Entity Dictionary (BED) |

BEDASSLE | Quantifies effects of geo/eco distance on genetic differentiation |

BEDMatrix | Extract Genotypes from a PLINK .bed File |

bedr | Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix' |

beepr | Easily Play Notification Sounds on any Platform |

beeswarm | The Bee Swarm Plot, an Alternative to Stripchart |

beezdemand | Behavioral Economic Easy Demand |

befproj | Makes a Local Population Projection |

beginr | Functions for R Beginners |

behaviorchange | Tools for Behavior Change Researchers and Professionals |

behavr | Canonical Data Structure for Behavioural Data |

belex | Download Historical Data from the Belgrade Stock Exchange |

belg | Boltzmann Entropy of a Landscape Gradient |

bellreg | Count Regression Models Based on the Bell Distribution |

bench | High Precision Timing of R Expressions |

benchden | 28 benchmark densities from Berlinet/Devroye (1994) |

Benchmarking | Benchmark and Frontier Analysis Using DEA and SFA |

benchmarkme | Crowd Sourced System Benchmarks |

benchmarkmeData | Data Set for the 'benchmarkme' Package |

benchr | High Precise Measurement of R Expressions Execution Time |

bender | Bender Client |

benford | Benford's Analysis on Large Data Sets |

benford.analysis | Benford Analysis for Data Validation and Forensic Analytics |

BenfordTests | Statistical Tests for Evaluating Conformity to Benford's Law |

BENMMI | Benthic Multi-Metric Index |

bentcableAR | Bent-Cable Regression for Independent Data or Autoregressive Time Series |

benthos | Marine Benthic Ecosystem Analysis |

Bergm | Bayesian Exponential Random Graph Models |

berryFunctions | Function Collection Related to Plotting and Hydrology |

BeSS | Best Subset Selection /Ridge Regression in Linear, Logistic, Poisson and CoxPH Models |

Bessel | Computations and Approximations for Bessel Functions |

BEST | Bayesian Estimation Supersedes the t-Test |

bestglm | Best Subset GLM and Regression Utilities |

Bestie | Bayesian Estimation of Intervention Effects |

bestNormalize | Normalizing Transformation Functions |

BESTree | Branch-Exclusive Splits Trees |

bestridge | A Comprehensive R Package for Best Subset Selection |

bestSDP | Burden Estimate of Common Communicable Diseases in Settlements of Displaced Populations |

BET | Binary Expansion Testing |

BetaBit | Mini Games from Adventures of Beta and Bit |

betaboost | Boosting Beta Regression |

betacal | Beta Calibration |

betafam | Detecting rare variants for quantitative traits using nuclear families |

betafunctions | Functions for Working with Two- And Four-Parameter Beta Probability Distributions |

betalink | Beta-Diversity of Species Interactions |

betapart | Partitioning Beta Diversity into Turnover and Nestedness Components |

BetaPASS | Calculate Power and Sample Size with Beta Regression |

betaper | Taxonomic Uncertainty on Multivariate Analyses of Ecological Data |

betareg | Beta Regression |

betategarch | Simulation, Estimation and Forecasting of Beta-Skew-t-EGARCH Models |

bethel | Bethel's algorithm |

BETS | Brazilian Economic Time Series |

bets.covid19 | The BETS Model for Early Epidemic Data |

bettermc | Enhanced Fork-Based Parallelization |

BeviMed | Bayesian Evaluation of Variant Involvement in Mendelian Disease |

BeyondBenford | Compare the Goodness of Fit of Benford's and Blondeau Da Silva's Digit Distributions to a Given Dataset |

beyondWhittle | Bayesian Spectral Inference for Stationary Time Series |

bezier | Toolkit for Bezier Curves and Splines |

bfast | Breaks For Additive Season and Trend (BFAST) |

bfp | Bayesian Fractional Polynomials |

BFpack | Flexible Bayes Factor Testing of Scientific Expectations |

BFS | Search and Download Data from the Swiss Federal Statistical Office (BFS) |

bfsl | Best-Fit Straight Line |

bfsMaps | Plot Maps from Switzerland by Swiss Federal Statistical Office |

bfw | Bayesian Framework for Computational Modeling |

BGData | A Suite of Packages for Analysis of Big Genomic Data |

bgeva | Binary Generalized Extreme Value Additive Models |

bggAnalytics | BoardGameGeek's Board Game Data Analysis Tools |

BGGE | Bayesian Genomic Linear Models Applied to GE Genome Selection |

BGGM | Bayesian Gaussian Graphical Models |

bggum | Bayesian Estimation of Generalized Graded Unfolding Model Parameters |

BGLR | Bayesian Generalized Linear Regression |

bgmfiles | Example BGM Files for the Atlantis Ecosystem Model |

BGmisc | Behavior Genetic Modeling Functions |

bgmm | Gaussian Mixture Modeling Algorithms and the Belief-Based Mixture Modeling |

BGPhazard | Markov Beta and Gamma Processes for Modeling Hazard Rates |

BGSIMD | Block Gibbs Sampler with Incomplete Multinomial Distribution |

bgsmtr | Bayesian Group Sparse Multi-Task Regression |

bgumbel | Bimodal Gumbel Distribution |

BGVAR | Bayesian Global Vector Autoregressions |

BH | Boost C++ Header Files |

BHAI | Estimate the Burden of Healthcare-Associated Infections |

Bhat | General likelihood exploration |

BHH2 | Useful Functions for Box, Hunter and Hunter II |

bhm | Biomarker Threshold Models |

bhmbasket | Bayesian Hierarchical Models for Basket Trials |

BHMSMAfMRI | Bayesian Hierarchical Multi-Subject Multiscale Analysis of Functional MRI Data |

bhpm | Bayesian Hierarchical Poisson Models for Multiple Grouped Outcomes with Clustering |

BHSBVAR | Structural Bayesian Vector Autoregression Models |

BHTSpack | Bayesian Multi-Plate High-Throughput Screening of Compounds |

biasbetareg | Bias correction of the parameter estimates of the beta regression model |

BiasCorrector | A GUI to Correct Measurement Bias in DNA Methylation Analyses |

BiasedUrn | Biased Urn Model Distributions |

bib2df | Parse a BibTeX File to a Data Frame |

BiBitR | R Wrapper for Java Implementation of BiBit |

bibliometrix | Comprehensive Science Mapping Analysis |

bibliometrixData | Bibliometrix Example Datasets |

biblionetwork | Create Different Types of Bibliometric Networks |

BibPlots | Plot Functions for Use in Bibliometrics |

bibtex | Bibtex Parser |

biclique | Maximal Biclique Enumeration in Bipartite Graphs |

biclust | BiCluster Algorithms |

biclustermd | Biclustering with Missing Data |

BICORN | Integrative Inference of De Novo Cis-Regulatory Modules |

BiDAG | Bayesian Inference for Directed Acyclic Graphs |

BiDimRegression | Calculates the Bidimensional Regression Between Two 2D Configurations |

BIEN | Tools for Accessing the Botanical Information and Ecology Network Database |

bife | Binary Choice Models with Fixed Effects |

BIFIEsurvey | Tools for Survey Statistics in Educational Assessment |

bifurcatingr | Bifurcating Autoregressive Models |

biganalytics | Utilities for 'big.matrix' Objects from Package 'bigmemory' |

bigassertr | Assertion and Message Functions |

bigchess | Read, Write, Manipulate, Explore Chess PGN Files and R API to UCI Chess Engines |

bigdatadist | Distances for Machine Learning and Statistics in the Context of Big Data |

BIGDAWG | Case-Control Analysis of Multi-Allelic Loci |

bigdist | Store Distance Matrices on Disk |

bigGP | Distributed Gaussian Process Calculations |

BIGL | Biochemically Intuitive Generalized Loewe Model |

biglasso | Extending Lasso Model Fitting to Big Data |

bigleaf | Physical and Physiological Ecosystem Properties from Eddy Covariance Data |

biglm | Bounded Memory Linear and Generalized Linear Models |

biglmm | Bounded Memory Linear and Generalized Linear Models |

bigMap | Big Data Mapping |

bigmatch | Making Optimal Matching Size-Scalable Using Optimal Calipers |

bigmds | Multidimensional Scaling for Big Data |

bigmemory | Manage Massive Matrices with Shared Memory and Memory-Mapped Files |

bigmemory.sri | A shared resource interface for Bigmemory Project packages |

bigparallelr | Easy Parallel Tools |

bigQueryR | Interface with Google BigQuery with Shiny Compatibility |

BigQuic | Big Quadratic Inverse Covariance Estimation |

bigreadr | Read Large Text Files |

bigReg | Generalized Linear Models (GLM) for Large Data Sets |

bigrquery | An Interface to Google's 'BigQuery' 'API' |

bigsnpr | Analysis of Massive SNP Arrays |

bigsparser | Sparse Matrix Format with Data on Disk |

bigsplines | Smoothing Splines for Large Samples |

bigstatsr | Statistical Tools for Filebacked Big Matrices |

bigstep | Stepwise Selection for Large Data Sets |

bigSurvSGD | Big Survival Analysis Using Stochastic Gradient Descent |

bigtabulate | Table, Apply, and Split Functionality for Matrix and 'big.matrix' Objects |

bigtcr | Nonparametric Analysis of Bivariate Gap Time with Competing Risks |

bigtime | Sparse Estimation of Large Time Series Models |

BigTSP | Top Scoring Pair based methods for classification |

bigutilsr | Utility Functions for Large-scale Data |

BigVAR | Dimension Reduction Methods for Multivariate Time Series |

bikeshare14 | Bay Area Bike Share Trips in 2014 |

bikm1 | Co-Clustering Adjusted Rand Index and Bikm1 Procedure for Contingency and Binary Data-Sets |

bild | A Package for BInary Longitudinal Data |

billboard | Contains Data of Billboard Hot 100 Songs |

billboarder | Create Interactive Chart with the JavaScript 'Billboard' Library |

bimetallic | Power for SNP analyses using silver standard cases |

bimets | Time Series and Econometric Modeling |

bimixt | Estimates Mixture Models for Case-Control Data |

BimodalIndex | The Bimodality Index |

Binarize | Binarization of One-Dimensional Data |

BinarybalancedCut | Threshold Cut Point of Probability for a Binary Classifier Model |

BinaryDosage | Creates, Merges, and Reads Binary Dosage Files |

BinaryEMVS | Variable Selection for Binary Data Using the EM Algorithm |

BinaryEPPM | Mean and Variance Modeling of Binary Data |

binaryGP | Fit and Predict a Gaussian Process Model with (Time-Series) Binary Response |

binaryLogic | Binary Logic |

binb | 'binb' is not 'Beamer' |

BINCOR | Estimate the Correlation Between Two Irregular Time Series |

binda | Multi-Class Discriminant Analysis using Binary Predictors |

bindata | Generation of Artificial Binary Data |

bindr | Parametrized Active Bindings |

bindrcpp | An 'Rcpp' Interface to Active Bindings |

binequality | Methods for Analyzing Binned Income Data |

binford | Binford's Hunter-Gatherer Data |

bingat | Binary Graph Analysis Tools |

binGroup | Evaluation and Experimental Design for Binomial Group Testing |

binGroup2 | Identification and Estimation using Group Testing |

BinGSD | Calculation for Single Arm Group Sequential Test with Binary Endpoint |

binhf | Haar-Fisz Functions for Binomial Data |

binman | A Binary Download Manager |

BinMat | Processes Binary Data Obtained from Fragment Analysis |

binMto | Many-to-One Comparisons of Proportions |

binnednp | Nonparametric Estimation for Interval-Grouped Data |

BinNonNor | Data Generation with Binary and Continuous Non-Normal Components |

BinNor | Simultaneous Generation of Multivariate Binary and Normal Variates |

binom | Binomial Confidence Intervals For Several Parameterizations |

binomialcftp | Generates binomial random numbers via the coupling from the past algorithm |

binomialMix | Mixture Models for Binomial and Longitudinal Data |

binomialRF | Binomial Random Forest Feature Selection |

binomlogit | Efficient MCMC for Binomial Logit Models |

binomSamSize | Confidence Intervals and Sample Size Determination for a Binomial Proportion under Simple Random Sampling and Pooled Sampling |

BinOrdNonNor | Concurrent Generation of Binary, Ordinal and Continuous Data |

binovisualfields | Depth-Dependent Binocular Visual Fields Simulation |

BinQuasi | Analyzing Replicated ChIP Sequencing Data Using Quasi-Likelihood |

binr | Cut Numeric Values into Evenly Distributed Groups |

BinSegBstrap | Piecewise Smooth Regression by Bootstrapped Binary Segmentation |

binsegRcpp | Efficient Implementation of Binary Segmentation |

binseqtest | Exact Binary Sequential Designs and Analysis |

binsmooth | Generate PDFs and CDFs from Binned Data |

binsreg | Binscatter Estimation and Inference |

binst | Data Preprocessing, Binning for Classification and Regression |

bio.infer | Predict Environmental Conditions from Biological Observations |

bio3d | Biological Structure Analysis |

bioacoustics | Analyse Audio Recordings and Automatically Extract Animal Vocalizations |

bioassays | Summarising Multi Well Plate Cellular Assay |

bioC.logs | BioConductor Package Downloads Stats |

BioCircos | Interactive Circular Visualization of Genomic Data using 'htmlwidgets' and 'BioCircos.js' |

BiocManager | Access the Bioconductor Project Package Repository |

Biocomb | Feature Selection and Classification with the Embedded Validation Procedures for Biomedical Data Analysis |

biocompute | Create and Manipulate BioCompute Objects |

Biodem | Biodemography Functions |

BiodiversityR | Package for Community Ecology and Suitability Analysis |

BIOdry | Multilevel Modeling of Dendroclimatical Fluctuations |

BioFTF | Biodiversity Assessment Using Functional Tools |

biogas | Process Biogas Data and Predict Biogas Production |

biogeo | Point Data Quality Assessment and Coordinate Conversion |

biogram | N-Gram Analysis of Biological Sequences |

biogrowth | Modelling of Population Growth |

Bioi | Biological Image Analysis |

bioimagetools | Tools for Microscopy Imaging |

bioinactivation | Mathematical Modelling of (Dynamic) Microbial Inactivation |

BioInsight | Filter and Plot RNA Biotypes |

biolink | Create Hyperlinks to Biological Databases and Resources |

Biolinv | Modelling and Forecasting Biological Invasions |

BIOM.utils | Utilities for the BIOM (Biological Observation Matrix) Format |

BioMark | Find Biomarkers in Two-Class Discrimination Problems |

biomartr | Genomic Data Retrieval |

BioMedR | Generating Various Molecular Representations for Chemicals, Proteins, DNAs, RNAs and Their Interactions |

biomod2 | Ensemble Platform for Species Distribution Modeling |

bionetdata | Biological and chemical data networks |

bioOED | Sensitivity Analysis and Optimum Experiment Design for Microbial Inactivation |

Biopeak | Identification of Impulse-Like Gene Expression Changes in Short Genomic Series Data |

BioPET | Biomarker Prognostic Enrichment Tool |

BioPETsurv | Biomarker Prognostic Enrichment Tool for Time-to-Event Trial |

bioPN | Simulation of deterministic and stochastic biochemical reaction networks using Petri Nets |

BioProbability | Probability in Biostatistics |

bioRad | Biological Analysis and Visualization of Weather Radar Data |

biorxivr | Search and Download Papers from the bioRxiv Preprint Server |

Bios2cor | From Biological Sequences and Simulations to Correlation Analysis |

bios2mds | From Biological Sequences to Multidimensional Scaling |

bioseq | A Toolbox for Manipulating Biological Sequences |

bioset | Convert a Matrix of Raw Values into Nice and Tidy Data |

biosignalEMG | Tools for Electromyogram Signals (EMG) Analysis |

biospear | Biomarker Selection in Penalized Regression Models |

biostat3 | Utility Functions, Datasets and Extended Examples for Survival Analysis |

Biostatistics | Statistics Tutorials for Biologists |

BioStatR | Initiation à La Statistique Avec R |

Biotech | Diverse Applications for Biotechnology |

biotic | Calculation of Freshwater Biotic Indices |

biotools | Tools for Biometry and Applied Statistics in Agricultural Science |

BioVenn | Create Area-Proportional Venn Diagrams from Biological Lists |

bipartite | Visualising Bipartite Networks and Calculating Some (Ecological) Indices |

bipartiteD3 | Interactive Bipartite Graphs |

biplotbootGUI | Bootstrap on Classical Biplots and Clustering Disjoint Biplot |

BiplotGUI | Interactive Biplots in R |

BiProbitPartial | Bivariate Probit with Partial Observability |

birankr | Ranking Nodes in Bipartite and Weighted Networks |

birdring | Methods to Analyse Ring Re-Encounter Data |

BIRDS | Biodiversity Information Review and Decision Support |

birk | MA Birk's Functions |

birtr | The R Package for "The Basics of Item Response Theory Using R" |

BIS | Programmatic Access to Bank for International Settlements Data |

biscale | Tools and Palettes for Bivariate Thematic Mapping |

bisect | Estimating Cell Type Composition from Methylation Sequencing Data |

bisectr | Tools to find bad commits with git bisect |

BiSEp | Toolkit to Identify Candidate Synthetic Lethality |

bisque | Approximate Bayesian Inference via Sparse Grid Quadrature Evaluation (BISQuE) for Hierarchical Models |

BisqueRNA | Decomposition of Bulk Expression with Single-Cell Sequencing |

BisRNA | Analysis of RNA Cytosine-5 Methylation |

bit | Classes and Methods for Fast Memory-Efficient Boolean Selections |

bit64 | A S3 Class for Vectors of 64bit Integers |

bite | Bayesian Integrative Models of Trait Evolution |

bitmexr | R Client for BitMEX |

bitops | Bitwise Operations |

BiTrinA | Binarization and Trinarization of One-Dimensional Data |

bitsqueezr | Quantize Floating-Point Numbers for Improved Compressibility |

biva | Business Intelligence |

bivariate | Bivariate Probability Distributions |

Bivariate.Pareto | Bivariate Pareto Models |

BivarP | Estimating the Parameters of Some Bivariate Distributions |

BivGeo | Basu-Dhar Bivariate Geometric Distribution |

bivgeom | Roy's Bivariate Geometric Distribution |

bivquant | Estimation of Bivariate Quantiles |

BivRec | Bivariate Alternating Recurrent Event Data Analysis |

BivRegBLS | Tolerance Interval and EIV Regression - Method Comparison Studies |

bivrp | Bivariate Residual Plots with Simulation Polygons |

BivUnifBin | Generation of Bivariate Uniform Data and Its Relation to Bivariate Binary Data |

biwavelet | Conduct Univariate and Bivariate Wavelet Analyses |

biwt | Functions to compute the biweight mean vector and covariance & correlation matrices |

bizdays | Business Days Calculations and Utilities |

bjscrapeR | An API Wrapper for the Bureau of Justice Statistics (BJS) |

bkmr | Bayesian Kernel Machine Regression |

bkmrhat | Parallel Chain Tools for Bayesian Kernel Machine Regression |

BKPC | Bayesian Kernel Projection Classifier |

blackbox | Black Box Optimization and Exploration of Parameter Space |

BlackCarbon | Processing Raw Black Carbon Concentration |

blaise | Read and Write FWF Files in the Blaise Format |

BlakerCI | Blaker's Binomial and Poisson Confidence Limits |

BlandAltmanLeh | Plots (Slightly Extended) Bland-Altman Plots |

blandr | Bland-Altman Method Comparison |

blapsr | Bayesian Inference with Laplace Approximations and P-Splines |

blaster | Native R Implementation of an Efficient BLAST-Like Algorithm |

blastula | Easily Send HTML Email Messages |

blatent | Bayesian Latent Variable Models |

blatr | Send Emails Using 'Blat' for Windows |

Blaunet | Calculate and Analyze Blau Status for (Covert) Organizations |

blavaan | Bayesian Latent Variable Analysis |

BLCOP | Black-Litterman and Copula Opinion Pooling Frameworks |

blendedLink | A New Link Function that Blends Two Specified Link Functions |

blender | Analyze biotic homogenization of landscapes |

Blendstat | Joint Analysis of Experiments with Mixtures and Random Effects |

blin | Bipartite Longitudinal Influence Network (BLIN) Estimation |

blindrecalc | Blinded Sample Size Recalculation |

blink | Record Linkage for Empirically Motivated Priors |

blm | Binomial linear and linear-expit regression |

blme | Bayesian Linear Mixed-Effects Models |

blmeco | Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan" |

BLModel | Black-Litterman Posterior Distribution |

blob | A Simple S3 Class for Representing Vectors of Binary Data ('BLOBS') |

BlockCov | Estimation of Large Block Covariance Matrices |

blockCV | Spatial and Environmental Blocking for K-Fold Cross-Validation |

BlockFeST | Bayesian Calculation of Region-Specific Fixation Index to Detect Local Adaptation |

blockForest | Block Forests: Random Forests for Blocks of Clinical and Omics Covariate Data |

blocklength | Select Optimal Block-Length to Bootstrap Dependent Data (Block Bootstrap) |

blockmatrix | blockmatrix: Tools to solve algebraic systems with partitioned matrices |

BlockMessage | Creates strings that show a text message in 8 by 8 block letters |

blockmodeling | Generalized and Classical Blockmodeling of Valued Networks |

blockmodels | Latent and Stochastic Block Model Estimation by a 'V-EM' Algorithm |

blockrand | Randomization for Block Random Clinical Trials |

blockRAR | Block Design for Response-Adaptive Randomization |

blocksdesign | Nested and Crossed Block Designs for Factorial and Unstructured Treatment Sets |

blockTools | Block, Assign, and Diagnose Potential Interference in Randomized Experiments |

blogdown | Create Blogs and Websites with R Markdown |

BLOQ | Impute and Analyze Data with BLOQ Observations |

blorr | Tools for Developing Binary Logistic Regression Models |

BLPestimatoR | Performs a BLP Demand Estimation |

BLR | Bayesian Linear Regression |

blrm | Dose Escalation Design in Phase I Oncology Trial Using Bayesian Logistic Regression Modeling |

BLRPM | Stochastic Rainfall Generator Bartlett-Lewis Rectangular Pulse Model |

BLRShiny | Interactive Document for Working with Binary Logistic Regression Analysis |

BLRShiny2 | Interactive Document for Working with Binary Logistic Regression Analysis |

blsAPI | Request Data from the U.S. Bureau of Labor Statistics API |

blscrapeR | An API Wrapper for the Bureau of Labor Statistics (BLS) |

BLSM | Bayesian Latent Space Model |

bltm | Bayesian Latent Threshold Modeling |

BlythStillCasellaCI | Blyth-Still-Casella Exact Binomial Confidence Intervals |

BMA | Bayesian Model Averaging |

bmabasket | Bayesian Model Averaging for Basket Trials |

BMAmevt | Multivariate Extremes: Bayesian Estimation of the Spectral Measure |

bmass | Bayesian Multivariate Analysis of Summary Statistics |

bmd | Benchmark dose analysis for dose-response data |

bmem | Mediation Analysis with Missing Data Using Bootstrap |

bmeta | Bayesian Meta-Analysis and Meta-Regression |

bmgarch | Bayesian Multivariate GARCH Models |

bmggum | Bayesian Multidimensional Generalized Graded Unfolding Model |

BMisc | Miscellaneous Functions for Panel Data, Quantiles, and Printing Results |

Bmix | Bayesian Sampling for Stick-Breaking Mixtures |

bmixture | Bayesian Estimation for Finite Mixture of Distributions |

bmk | MCMC diagnostics package |

bmlm | Bayesian Multilevel Mediation |

bmmix | Bayesian multinomial mixture |

bmotif | Motif Analyses of Bipartite Networks |

bmp | Read Windows Bitmap (BMP) Images |

BMRBr | 'BMRB' File Downloader |

bmrm | Bundle Methods for Regularized Risk Minimization Package |

BMRSr | Wrapper Functions to the 'BMRS API' |

BMRV | Bayesian Models for Rare Variant Association Analysis |

BMS | Bayesian Model Averaging Library |

bmscstan | Bayesian Multilevel Single Case Models using 'Stan' |

BMT | The BMT Distribution |

BMTAR | Bayesian Approach for MTAR Models with Missing Data |

BMTME | Bayesian Multi-Trait Multi-Environment for Genomic Selection Analysis |

bnclassify | Learning Discrete Bayesian Network Classifiers from Data |

BNDataGenerator | Data Generator based on Bayesian Network Model |

bnlearn | Bayesian Network Structure Learning, Parameter Learning and Inference |

bnma | Bayesian Network Meta-Analysis using 'JAGS' |

bnmonitor | An Implementation of Sensitivity Analysis in Bayesian Networks |

BNN | Bayesian Neural Network for High-Dimensional Nonlinear Variable Selection |

bnnSurvival | Bagged k-Nearest Neighbors Survival Prediction |

bnormnlr | Bayesian Estimation for Normal Heteroscedastic Nonlinear Regression Models |

bnpa | Bayesian Networks & Path Analysis |

BNPdensity | Ferguson-Klass Type Algorithm for Posterior Normalized Random Measures |

BNPmix | Bayesian Nonparametric Mixture Models |

BNPMIXcluster | Bayesian Nonparametric Model for Clustering with Mixed Scale Variables |

bnpmr | Bayesian Monotonic Nonparametric Regression |

bnpsd | Simulate Genotypes from the BN-PSD Admixture Model |

BNPTSclust | A Bayesian Nonparametric Algorithm for Time Series Clustering |

BNrich | Pathway Enrichment Analysis Based on Bayesian Network |

BNSL | Bayesian Network Structure Learning |

BNSP | Bayesian Non- And Semi-Parametric Model Fitting |

bnspatial | Spatial Implementation of Bayesian Networks and Mapping |

bnstruct | Bayesian Network Structure Learning from Data with Missing Values |

bnviewer | Bayesian Networks Interactive Visualization and Explainable Artificial Intelligence |

boa | Bayesian Output Analysis Program (BOA) for MCMC |

BoardGames | Board Games and Tools for Building Board Games |

bodenmiller | Profiling of Peripheral Blood Mononuclear Cells using CyTOF |

BOG | Bacterium and Virus Analysis of Orthologous Groups (BOG) is a Package for Identifying Differentially Regulated Genes in the Light of Gene Functions |

boilerpipeR | Interface to the Boilerpipe Java Library |

BOIN | Bayesian Optimal INterval (BOIN) Design for Single-Agent and Drug- Combination Phase I Clinical Trials |

BOJ | Interface to Bank of Japan Statistics |

bold | Interface to Bold Systems API |

Bolstad | Functions for Elementary Bayesian Inference |

Bolstad2 | Bolstad functions |

BoltzMM | Boltzmann Machines with MM Algorithms |

bomrang | Australian Government Bureau of Meteorology ('BOM') Data Client |

BondValuation | Fixed Coupon Bond Valuation Allowing for Odd Coupon Periods and Various Day Count Conventions |

BonEV | An Improved Multiple Testing Procedure for Controlling False Discovery Rates |

bookdown | Authoring Books and Technical Documents with R Markdown |

bookdownplus | Generate Assorted Books and Documents with R 'bookdown' Package |

BoolFilter | Optimal Estimation of Partially Observed Boolean Dynamical Systems |

BoolNet | Construction, Simulation and Analysis of Boolean Networks |

Boom | Bayesian Object Oriented Modeling |

BoomSpikeSlab | MCMC for Spike and Slab Regression |

BoostMLR | Boosting for Multivariate Longitudinal Responses |

boostmtree | Boosted Multivariate Trees for Longitudinal Data |

boostr | A modular framework to bag or boost any estimation procedure |

boot | Bootstrap Functions (Originally by Angelo Canty for S) |

boot.heterogeneity | A Bootstrap-Based Heterogeneity Test for Meta-Analysis |

bootComb | Combine Parameter Estimates via Parametric Bootstrap |

bootES | Bootstrap Effect Sizes |

bootImpute | Bootstrap Inference for Multiple Imputation |

bootLR | Bootstrapped Confidence Intervals for (Negative) Likelihood Ratio Tests |

BootMRMR | Bootstrap-MRMR Technique for Informative Gene Selection |

bootnet | Bootstrap Methods for Various Network Estimation Routines |

BootPR | Bootstrap Prediction Intervals and Bias-Corrected Forecasting |

bootruin | A Bootstrap Test for the Probability of Ruin in the Classical Risk Process |

bootspecdens | Testing equality of spectral densities |

bootsPLS | Bootstrap Subsamplings of Sparse Partial Least Squares - Discriminant Analysis for Classification and Signature Identification |

bootStepAIC | Bootstrap stepAIC |

bootstrap | Functions for the Book "An Introduction to the Bootstrap" |

bootstrapFP | Bootstrap Algorithms for Finite Population Inference |

BootstrapQTL | Bootstrap cis-QTL Method that Corrects for the Winner's Curse |

bootSVD | Fast, Exact Bootstrap Principal Component Analysis for High Dimensional Data |

boottol | Bootstrap Tolerance Levels for Credit Scoring Validation Statistics |

bootUR | Bootstrap Unit Root Tests |

Boptbd | Bayesian Optimal Block Designs |

bor | Transforming Behavioral Observation Records into Data Matrices |

boral | Bayesian Ordination and Regression AnaLysis |

borrowr | Estimate Causal Effects with Borrowing Between Data Sources |

Boruta | Wrapper Algorithm for All Relevant Feature Selection |

BoSSA | A Bunch of Structure and Sequence Analysis |

BOSSreg | Best Orthogonalized Subset Selection (BOSS) |

botor | 'AWS Python SDK' ('boto3') for R |

boundingbox | Create a Bounding Box in an Image |

boussinesq | Analytic Solutions for (ground-water) Boussinesq Equation |

boutliers | Outlier Detection and Influence Diagnostics for Meta-Analysis |

BoutrosLab.plotting.general | Functions to Create Publication-Quality Plots |

box | Write Reusable, Composable and Modular R Code |

boxcoxmix | Box-Cox-Type Transformations for Linear and Logistic Models with Random Effects |

boxplotdbl | Double Box Plot for Two-Axes Correlation |

boxr | Interface for the 'Box.com API' |

bp | Blood Pressure Analysis in R |

bpa | Basic Pattern Analysis |

bpbounds | Nonparametric Bounds for the Average Causal Effect Due to Balke and Pearl and Extensions |

bpca | Biplot of Multivariate Data Based on Principal Components Analysis |

bpcp | Beta Product Confidence Procedure for Right Censored Data |

bpcs | Bayesian Paired Comparison Analysis with Stan |

bpDir | Boxplots for Directional Data |

bPeaks | bPeaks: an intuitive peak-calling strategy to detect transcription factor binding sites from ChIP-seq data in small eukaryotic genomes |

BPEC | Bayesian Phylogeographic and Ecological Clustering |

bpgmm | Bayesian Model Selection Approach for Parsimonious Gaussian Mixture Models |

BPM | Bayesian Purity Model to Estimate Tumor Purity |

bpnreg | Bayesian Projected Normal Regression Models for Circular Data |

bpp | Computations Around Bayesian Predictive Power |

bqror | Bayesian Quantile Regression for Ordinal Models |

bqtl | Bayesian QTL Mapping Toolkit |

bracer | Brace Expansions |

BradleyTerry2 | Bradley-Terry Models |

braidReports | Visualize Combined Action Response Surfaces and Report BRAID Analyses |

braidrm | Fitting Dose Response with the BRAID Combined Action Model |

brainGraph | Graph Theory Analysis of Brain MRI Data |

brainKCCA | Region-Level Connectivity Network Construction via Kernel Canonical Correlation Analysis |

brainR | Helper Functions to 'misc3d' and 'rgl' Packages for Brain Imaging |

Branching | Simulation and Estimation for Branching Processes |

brandwatchR | 'Brandwatch' API to R |

brant | Test for Parallel Regression Assumption |

bravo | Bayesian Screening and Variable Selection |

BrazilMet | Download and Processing of Automatic Weather Stations (AWS) Data of INMET-Brazil |

BRDT | Binomial Reliability Demonstration Tests |

brea | Bayesian Recurrent Event Analysis |

breakage | SICM pipette tip geometry estimation |

breakDown | Model Agnostic Explainers for Individual Predictions |

breakfast | Methods for Fast Multiple Change-Point Detection and Estimation |

breakpoint | An R Package for Multiple Break-Point Detection via the Cross-Entropy Method |

BreakPoints | Identify Breakpoints in Series of Data |

breathtestcore | Core Functions to Read and Fit 13c Time Series from Breath Tests |

breathteststan | Stan-Based Fit to Gastric Emptying Curves |

bReeze | Functions for Wind Resource Assessment |

BRETIGEA | Brain Cell Type Specific Gene Expression Analysis |

brew | Templating Framework for Report Generation |

brglm | Bias Reduction in Binomial-Response Generalized Linear Models |

brglm2 | Bias Reduction in Generalized Linear Models |

brickr | Emulate LEGO Bricks in 2D and 3D |

bridgedist | An Implementation of the Bridge Distribution with Logit-Link as in Wang and Louis (2003) |

bridger2 | Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data |

bridgesampling | Bridge Sampling for Marginal Likelihoods and Bayes Factors |

briKmeans | Package for Brik and Fabrik Algorithms to Initialise Kmeans |

brinton | A Graphical EDA Tool |

brio | Basic R Input Output |

briqr | Interface to the 'Briq' API |

BRISC | Fast Inference for Large Spatial Datasets using BRISC |

briskaR | Biological Risk Assessment |

BRL | Beta Record Linkage |

brlrmr | Bias Reduction with Missing Binary Response |

brm | Binary Regression Model |

brms | Bayesian Regression Models using 'Stan' |

brnn | Bayesian Regularization for Feed-Forward Neural Networks |

Brobdingnag | Very Large Numbers in R |

brokenstick | Broken Stick Model for Irregular Longitudinal Data |

broman | Karl Broman's R Code |

broom | Convert Statistical Objects into Tidy Tibbles |

broom.helpers | Helpers for Model Coefficients Tibbles |

broom.mixed | Tidying Methods for Mixed Models |

broomExtra | Enhancements for 'broom' and 'easystats' Package Families |

brotli | A Compression Format Optimized for the Web |

BrownDog | Brown Dog R Interface |

Brq | Bayesian Analysis of Quantile Regression Models |

brr | Bayesian Inference on the Ratio of Two Poisson Rates |

brranching | Fetch 'Phylogenies' from Many Sources |

bruceR | Broadly Useful Convenient and Efficient R Functions |

BRugs | Interface to the 'OpenBUGS' MCMC Software |

Brundle | Normalisation Tools for Inter-Condition Variability of ChIP-Seq Data |

brunnermunzel | (Permuted) Brunner-Munzel Test |

brxx | Bayesian Test Reliability Estimation |

bs4Dash | A 'Bootstrap 4' Version of 'shinydashboard' |

BSagri | Safety Assessment in Agricultural Field Trials |

bsam | Bayesian State-Space Models for Animal Movement |

bsamGP | Bayesian Spectral Analysis Models using Gaussian Process Priors |

BSBT | The Bayesian Spatial Bradley–Terry Model |

bscaling | Variable Binary Scaling |

BSDA | Basic Statistics and Data Analysis |

bsearchtools | Binary Search Tools |

bsem | Bayesian Structural Equation Models |

BSGS | Bayesian Sparse Group Selection |

BSGW | Bayesian Survival Model with Lasso Shrinkage Using Generalized Weibull Regression |

bshazard | Nonparametric Smoothing of the Hazard Function |

bSims | Bird Point Count Simulator |

bslib | Custom 'Bootstrap' 'Sass' Themes for 'shiny' and 'rmarkdown' |

BsMD | Bayes Screening and Model Discrimination |

BSPADATA | Bayesian Proposal to Fit Spatial Econometric Models |

bspec | Bayesian Spectral Inference |

bsplinePsd | Bayesian Nonparametric Spectral Density Estimation Using B-Spline Priors |

bsplus | Adds Functionality to the R Markdown + Shiny Bootstrap Framework |

bspm | Bridge to System Package Manager |

bspmma | Bayesian Semiparametric Models for Meta-Analysis |

BSS | Brownian Semistationary Processes |

BSSasymp | Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing Matrix Estimates |

bssm | Bayesian Inference of Non-Linear and Non-Gaussian State Space Models |

bssn | Birnbaum-Saunders Model |

BSSprep | Whitening Data as Preparation for Blind Source Separation |

bst | Gradient Boosting |

bsTools | Create HTML Content with Bootstrap 5 Classes and Layouts |

bsts | Bayesian Structural Time Series |

bsub | Submitter and Monitor of the 'LSF Cluster' |

BSW | Fitting a Log-Binomial Model using the Bekhit-Schöpe-Wagenpfeil (BSW) Algorithm |

btb | Beyond the Border - Kernel Density Estimation for Urban Geography |

BTdecayLasso | Bradley-Terry Model with Exponential Time Decayed Log-Likelihood and Adaptive Lasso |

btergm | Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood |

BTLLasso | Modelling Heterogeneity in Paired Comparison Data |

BTM | Biterm Topic Models for Short Text |

BTSPAS | Bayesian Time-Stratified Population Analysis |

BTYD | Implementing BTYD Models with the Log Sum Exp Patch |

BTYDplus | Probabilistic Models for Assessing and Predicting your Customer Base |

bubblyr | Beautiful Bubbles for 'shiny' and 'rmarkdown' Backgrounds |

bucky | Bucky's Archive for Data Analysis in the Social Sciences |

BUCSS | Bias and Uncertainty Corrected Sample Size |

Buddle | A Deep Learning for Statistical Classification and Regression Analysis with Random Effects |

buffeRs | Buffer Generation for Spatial Models |

buildmer | Stepwise Elimination and Term Reordering for Mixed-Effects Regression |

buildr | Organize & Run Build Scripts Comfortably |

bujar | Buckley-James Regression for Survival Data with High-Dimensional Covariates |

bulletcp | Automatic Groove Identification via Bayesian Changepoint Detection |

bulletr | Algorithms for Matching Bullet Lands |

BullsEyeR | Topic Modelling |

bullwhipgame | Bullwhip Effect Demo in Shiny |

bunching | Estimate Bunching |

bunchr | Analyze Bunching in a Kink or Notch Setting |

bundesbank | Download Data from Bundesbank |

bundesligR | All Final Tables of the Bundesliga |

bupaR | Business Process Analysis in R |

burnr | Forest Fire History Analysis |

BurStFin | Burns Statistics Financial |

BurStMisc | Burns Statistics Miscellaneous |

bursts | Markov model for bursty behavior in streams |

busdater | Standard Date Calculations for Business |

BusinessDuration | Calculates Business Duration Between Two Dates |

butcher | Model Butcher |

BuyseTest | Generalized Pairwise Comparisons |

Bvalue | B-Value and Empirical Equivalence Bound |

BVAR | Hierarchical Bayesian Vector Autoregression |

bvarsv | Bayesian Analysis of a Vector Autoregressive Model with Stochastic Volatility and Time-Varying Parameters |

bvartools | Bayesian Inference of Vector Autoregressive Models |

BVARverse | Tidy Bayesian Vector Autoregression |

bvenn | A Simple alternative to proportional Venn diagrams |

bvls | The Stark-Parker algorithm for bounded-variable least squares |

bvpSolve | Solvers for Boundary Value Problems of Differential Equations |

BVSNLP | Bayesian Variable Selection in High Dimensional Settings using Nonlocal Priors |

bwd | Backward Procedure for Change-Point Detection |

bWGR | Bayesian Whole-Genome Regression |

BWGS | BreedWheat Genomic Selection Pipeline |

bwimage | Describe Image Patterns in Natural Structures |

BWStest | Baumgartner Weiss Schindler Test of Equal Distributions |

bwsTools | Tools for Case 1 Best-Worst Scaling (MaxDiff) Designs |

bysykkel | Get City Bike Data from Norway |

bytescircle | Statistics About Bytes Contained in a File as a Circle Plot |

bzinb | Bivariate Zero-Inflated Negative Binomial Model Estimator |

c060 | Extended Inference for Lasso and Elastic-Net Regularized Cox and Generalized Linear Models |

c212 | Methods for Detecting Safety Signals in Clinical Trials Using Body-Systems (System Organ Classes) |

c2c | Compare Two Classifications or Clustering Solutions of Varying Structure |

c3 | 'C3.js' Chart Library |

c3net | Infering large-scale gene networks with C3NET |

C443 | See a Forest for the Trees |

C50 | C5.0 Decision Trees and Rule-Based Models |

ca | Simple, Multiple and Joint Correspondence Analysis |

CA3variants | Three-Way Correspondence Analysis Variants |

cabinets | Project Specific Workspace Organization Templates |

cabootcrs | Bootstrap Confidence Regions for Simple and Multiple Correspondence Analysis |

cachem | Cache R Objects with Automatic Pruning |

cacIRT | Classification Accuracy and Consistency under Item Response Theory |

CaDENCE | Conditional Density Estimation Network Construction and Evaluation |

CADFtest | A Package to Perform Covariate Augmented Dickey-Fuller Unit Root Tests |

CADStat | Provides a GUI to Several Statistical Methods |

caesar | Encrypts and Decrypts Strings |

caffsim | Simulation of Plasma Caffeine Concentrations by Using Population Pharmacokinetic Model |

cAIC4 | Conditional Akaike Information Criterion for 'lme4' and 'nlme' |

CAinterprTools | Graphical Aid in Correspondence Analysis Interpretation and Significance Testings |

Cairo | R Graphics Device using Cairo Graphics Library for Creating High-Quality Bitmap (PNG, JPEG, TIFF), Vector (PDF, SVG, PostScript) and Display (X11 and Win32) Output |

cairoDevice | Embeddable Cairo Graphics Device Driver |

CAISEr | Comparison of Algorithms with Iterative Sample Size Estimation |

calACS | Calculations for All Common Subsequences |

Calculator.LR.FNs | Calculator for LR Fuzzy Numbers |

calculus | High Dimensional Numerical and Symbolic Calculus |

calcUnique | Simple Wrapper for Computationally Expensive Functions |

calcWOI | Calculates the Wavelet-Based Organization Index |

calendar | Create, Read, Write, and Work with 'iCalander' Files, Calendars and Scheduling Data |

calendR | Ready to Print Monthly and Yearly Calendars Made with 'ggplot2' |

CALF | Coarse Approximation Linear Function |

calibrar | Automated Parameter Estimation for Complex (Ecological) Models |

calibrate | Calibration of Scatterplot and Biplot Axes |

calibrateBinary | Calibration for Computer Experiments with Binary Responses |

CalibrateSSB | Weighting and Estimation for Panel Data with Non-Response |

calibrator | Bayesian Calibration of Complex Computer Codes |

CalibratR | Mapping ML Scores to Calibrated Predictions |

caliver | Calibration and Verification of Gridded Model Outputs |

callr | Call R from R |

calmate | Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation |

calpassapi | R Interface to Access CalPASS API |

CalSim | The Calibration Simplex |

CAMAN | Finite Mixture Models and Meta-Analysis Tools - Based on C.A.MAN |

CamelUp | 'CamelUp' Board Game as a Teaching Aid for Introductory Statistics |

campfin | Wrangle Campaign Finance Data |

camsRad | Client for CAMS Radiation Service |

caMST | Mixed Computerized Adaptive Multistage Testing |

camtrapR | Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses |

cancensus | Access, Retrieve, and Work with Canadian Census Data and Geography |

cancerGI | Analyses of Cancer Gene Interaction |

CancerGram | Prediction of Anticancer Peptides |

cancerTiming | Estimation of Temporal Ordering of Cancer Abnormalities |

candisc | Visualizing Generalized Canonical Discriminant and Canonical Correlation Analysis |

Canopy | Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing |

canprot | Compositional Analysis of Differentially Expressed Proteins in Cancer |

cansim | Accessing Statistics Canada Data Table and Vectors |

CANSIM2R | Directly Extracts Complete CANSIM Data Tables |

canvasXpress | Visualization Package for CanvasXpress in R |

canvasXpress.data | Datasets for the 'canvasXpress' Package |

cap | Covariate Assisted Principal (CAP) Regression for Covariance Matrix Outcomes |

cape | Combined Analysis of Pleiotropy and Epistasis for Diversity Outbred Mice |

caper | Comparative Analyses of Phylogenetics and Evolution in R |

capitalR | Capital Budgeting Analysis, Annuity Loan Calculations and Amortization Schedules |

capl | Compute and Visualize CAPL-2 Scores and Interpretations |

capm | Companion Animal Population Management |

capn | Capital Asset Pricing for Nature |

CaPO4Sim | A Virtual Patient Simulator in the Context of Calcium and Phosphate Homeostasis |

captioner | Numbers Figures and Creates Simple Captions |

captr | Client for the Captricity API |

capushe | CAlibrating Penalities Using Slope HEuristics |

capwire | Estimates population size from non-invasive sampling |

car | Companion to Applied Regression |

caracas | Computer Algebra |

caRamel | Automatic Calibration by Evolutionary Multi Objective Algorithm |

carat | Covariate-Adaptive Randomization for Clinical Trials |

CARBayes | Spatial Generalised Linear Mixed Models for Areal Unit Data |

CARBayesdata | Data Used in the Vignettes Accompanying the CARBayes and CARBayesST Packages |

CARBayesST | Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data |

carbonate | Interact with 'carbon.js' |

carcass | Estimation of the Number of Fatalities from Carcass Searches |

card | Cardiovascular and Autonomic Research Design |

carData | Companion to Applied Regression Data Sets |

cardidates | Identification of Cardinal Dates in Ecological Time Series |

cardioModel | Cardiovascular Safety Exposure-Response Modeling in Early-Phase Clinical Studies |

care | High-Dimensional Regression and CAR Score Variable Selection |

CARE1 | Statistical package for population size estimation in capture-recapture models |

caRecall | Government of Canada Vehicle Recalls Database API Wrapper |

careless | Procedures for Computing Indices of Careless Responding |

caret | Classification and Regression Training |

caretEnsemble | Ensembles of Caret Models |

carfima | Continuous-Time Fractionally Integrated ARMA Process for Irregularly Spaced Long-Memory Time Series Data |

cargo | Download and Run Cargo, the Rust Package Manager |

caribou | Estimation of caribou abundance based on large scale aggregations monitored by radio telemetry |

CarletonStats | Functions for Statistics Classes at Carleton College |

CARLIT | Ecological Quality Ratios Calculation and Plot |

Carlson | Carlson Elliptic Integrals and Incomplete Elliptic Integrals |

caROC | Continuous Biomarker Evaluation with Adjustment of Covariates |

caroline | A Collection of Database, Data Structure, Visualization, and Utility Functions for R |

carpenter | Build Common Tables of Summary Statistics for Reports |

caRpools | CRISPR AnalyzeR for Pooled CRISPR Screens |

carrier | Isolate Functions for Remote Execution |

CARRoT | Predicting Categorical and Continuous Outcomes Using One in Ten Rule |

CARS | Covariate Assisted Ranking and Screening for Large-Scale Two-Sample Inference |

carSurv | Correlation-Adjusted Regression Survival (CARS) Scores |

cartograflow | Filtering Matrix for Flow Mapping |

cartogram | Create Cartograms with R |

cartography | Thematic Cartography |

cartools | Tools for Understanding Highway Performance |

carx | Censored Autoregressive Model with Exogenous Covariates |

Cascade | Selection, Reverse-Engineering and Prediction in Cascade Networks |

CascadeData | Experimental Data of Cascade Experiments in Genomics |

cascadess | A Style Pronoun for 'htmltools' Tags |

caschrono | S<e9>ries Temporelles Avec R |

cascsim | Casualty Actuarial Society Individual Claim Simulator |

casebase | Fitting Flexible Smooth-in-Time Hazards and Risk Functions via Logistic and Multinomial Regression |

caseMatch | Identify Similar Cases for Qualitative Case Studies |

casen | Metodos De Estimacion Con Disenio Probabilistico y Estratificado en Encuesta CASEN (Estimation Methods with Probabilistic Stratified Sampling in CASEN Survey) |

casino | Play Casino Games |

CASMAP | Detection of Statistically Significant Combinations of SNPs in Association Mapping |

cassandRa | Finds Missing Links and Metric Confidence Intervals in Ecological Bipartite Networks |

CAST | 'caret' Applications for Spatial-Temporal Models |

castor | Efficient Phylogenetics on Large Trees |

cat | Analysis of categorical-variable datasets with missing values |

cat.dt | Computerized Adaptive Testing and Decision Trees |

cat2cat | Mapping of a Categorical Variable in a Panel Dataset |

catalog | Access the 'Spark Catalog' API via 'sparklyr' |

catch | Covariate-Adjusted Tensor Classification in High-Dimensions |

catchr | Taking the Pain Out of Catching and Handling Conditions |

catcont | Test, Identify, Select and Mutate Categorical or Continuous Values |

catdap | Categorical Data Analysis Program Package |

catdata | Categorical Data |

CatDataAnalysis | Datasetsfor Categorical Data Analysis by Agresti |

CatDyn | Fishery Stock Assessment by Catch Dynamics Models |

cate | High Dimensional Factor Analysis and Confounder Adjusted Testing and Estimation |

categoryEncodings | Category Variable Encodings |

catenary | Fits a Catenary to Given Points |

CatEncoders | Encoders for Categorical Variables |

CateSelection | Categorical Variable Selection Methods |

catfun | Categorical Data Analysis |

cati | Community Assembly by Traits: Individuals and Beyond |

catIrt | An R Package for Simulating IRT-Based Computerized Adaptive Tests |

CATkit | Chronomics Analysis Toolkit (CAT): Periodicity Analysis |

catlearn | Formal Psychological Models of Categorization and Learning |

catmap | Case-Control and TDT Meta-Analysis Package |

catmaply | Heatmap for Categorical Data using 'plotly' |

catnet | Categorical Bayesian Network Inference |

caTools | Tools: Moving Window Statistics, GIF, Base64, ROC AUC, etc |

catR | Generation of IRT Response Patterns under Computerized Adaptive Testing |

CatReg | Solution Paths for Linear and Logistic Regression Models with SCOPE Penalty |

catseyes | Create Catseye Plots Illustrating the Normal Distribution of the Means |

catsim | Binary and Categorical Image Similarity Index |

catspec | Special models for categorical variables |

catSurv | Computerized Adaptive Testing for Survey Research |

CATT | The Cochran-Armitage Trend Test |

CATTexact | Computation of the p-Value for the Exact Conditional Cochran-Armitage Trend Test |

cattonum | Encode Categorical Features |

CauchyCP | Powerful Test for Survival Data under Non-Proportional Hazards |

causact | Accelerated Bayesian Analytics with DAGs |

causalCmprsk | Nonparametric and Cox-Based Estimation of ATE in Competing Risks |

causaldrf | Tools for Estimating Causal Dose Response Functions |

causaleffect | Deriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models |

CausalGAM | Estimation of Causal Effects with Generalized Additive Models |

CausalImpact | Inferring Causal Effects using Bayesian Structural Time-Series Models |

CausalKinetiX | Learning Stable Structures in Kinetic Systems |

CausalMBSTS | MBSTS Models for Causal Inference and Forecasting |

causaloptim | An Interface to Specify Causal Graphs and Compute Bounds on Causal Effects |

CausalQueries | Make, Update, and Query Binary Causal Models |

causalsens | Selection Bias Approach to Sensitivity Analysis for Causal Effects |

causalweight | Estimation Methods for Causal Inference Based on Inverse Probability Weighting |

CautiousLearning | Control Charts with Guaranteed In-Control Performance and Cautious Parameters Learning |

CAvariants | Correspondence Analysis Variants |

CB2 | CRISPR Pooled Screen Analysis using Beta-Binomial Test |

cba | Clustering for Business Analytics |

cban | Cost Benefit Analysis |

cbanalysis | Coffee Break Descriptive Analysis |

cbar | Contextual Bayesian Anomaly Detection in R |

CBCgrps | Compare Baseline Characteristics Between Groups |

CBDA | Compressive Big Data Analytics |

cbinom | Continuous Analog of a Binomial Distribution |

cbird | Clustering of Multivariate Binary Data with Dimension Reduction via L1-Regularized Likelihood Maximization |

cblasr | The C Interface to 'BLAS' Routines |

CBPS | Covariate Balancing Propensity Score |

cbq | Conditional Binary Quantile Models |

cbsem | Simulation, Estimation and Segmentation of Composite Based Structural Equation Models |

cbsodataR | Statistics Netherlands (CBS) Open Data API Client |

CBSr | Fits Cubic Bezier Spline Functions to Intertemporal and Risky Choice Data |

CBT | Confidence Bound Target Algorithm |

CC | Control Charts |

CCA | Canonical Correlation Analysis |

CCAMLRGIS | Antarctic Spatial Data Manipulation |

ccaPP | (Robust) Canonical Correlation Analysis via Projection Pursuit |

ccboost | Robust Boosting |

cccd | Class Cover Catch Digraphs |

ccChooser | Developing a core collections |

cccp | Cone Constrained Convex Problems |

cccrm | Concordance Correlation Coefficient for Repeated (and Non-Repeated) Measures |

ccda | Combined Cluster and Discriminant Analysis |

ccdrAlgorithm | CCDr Algorithm for Learning Sparse Gaussian Bayesian Networks |

cchs | Cox Model for Case-Cohort Data with Stratified Subcohort-Selection |

cchsflow | Transforming and Harmonizing CCHS Variables |

ccid | Cross-Covariance Isolate Detect: a New Change-Point Method for Estimating Dynamic Functional Connectivity |

cclust | Convex Clustering Methods and Clustering Indexes |

CCM | Correlation Classification Method |

ccmm | Compositional Mediation Model |

ccmReportR | Wraps 'CCM' with Utility Functions |

ccostr | Estimation of Mean Costs in Censored Data |

CCP | Significance Tests for Canonical Correlation Analysis (CCA) |

CCpop | One and two locus GWAS of binary phenotype with case-control-population design |

ccRemover | Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data |

ccrs | Correct and Cluster Response Style Biased Data |

ccrtm | Coupled Chain Radiative Transfer Models |

ccss | Cluster Circular Systematic Sampling |

cctools | Tools for the Continuous Convolution Trick in Nonparametric Estimation |

CCTpack | Consensus Analysis, Model-Based Clustering, and Cultural Consensus Theory Applications |

cd | CD Data for Entity Resolution |

cdata | Fluid Data Transformations |

CDatanet | Modeling Count Data with Peer Effects |

cdb | Reading and Writing Constant DataBases |

cdcatR | Cognitive Diagnostic Computerized Adaptive Testing |

cdcfluview | Retrieve Flu Season Data from the United States Centers for Disease Control and Prevention ('CDC') 'FluView' Portal |

cdcsis | Conditional Distance Correlation Based Feature Screening and Conditional Independence Inference |

cder | Interface to the California Data Exchange Center |

cdfquantreg | Quantile Regression for Random Variables on the Unit Interval |

CDFt | Downscaling and Bias Correction via Non-Parametric CDF-Transform |

CDLasso | Coordinate Descent Algorithms for Lasso Penalized L1, L2, and Logistic Regression |

cdlei | Cause-Deleted Life Expectancy Improvement Procedure |

cdlTools | Tools to Download and Work with USDA Cropscape Data |

CDM | Cognitive Diagnosis Modeling |

CDNmoney | Components of Canadian Monetary and Credit Aggregates |

cdom | R Functions to Model CDOM Spectra |

cdparcoord | Top Frequency-Based Parallel Coordinates |

CDROM | Phylogenetically Classifies Retention Mechanisms of Duplicate Genes from Gene Expression Data |

cds | Constrained Dual Scaling for Detecting Response Styles |

CDSeq | A Complete Deconvolution Method using Sequencing Data |

CDVineCopulaConditional | Sampling from Conditional C- and D-Vine Copulas |

CEC | Cross-Entropy Clustering |

cec2013 | Benchmark functions for the Special Session and Competition on Real-Parameter Single Objective Optimization at CEC-2013 |

ced | The Compact Encoding Detector |

CEDARS | Simple and Efficient Pipeline for Electronic Health Record Annotation |

ceg | Chain Event Graph |

CEGO | Combinatorial Efficient Global Optimization |

celestial | Collection of Common Astronomical Conversion Routines and Functions |

cellOrigins | Finds RNASeq Source Tissues Using In Situ Hybridisation Data |

cellranger | Translate Spreadsheet Cell Ranges to Rows and Columns |

celltrackR | Motion Trajectory Analysis |

cellVolumeDist | Functions to fit cell volume distributions and thereby estimate cell growth rates and division times |

cellWise | Analyzing Data with Cellwise Outliers |

cem | Coarsened Exact Matching |

cemco | Fit 'CemCO' Algorithm |

CenBAR | Broken Adaptive Ridge AFT Model with Censored Data |

CENFA | Climate and Ecological Niche Factor Analysis |

cenGAM | Censored Regression with Smooth Terms |

cenROC | Estimation of the Time-Dependent ROC Curve and AUC for Censored Survival Data |

censCov | Linear Regression with a Randomly Censored Covariate |

CensMFM | Finite Mixture of Multivariate Censored/Missing Data |

censNID | censored NID samples |

censo2017 | Base de Datos de Facil Acceso del Censo 2017 de Chile (2017 Chilean Census Easy Access Database) |

censorcopula | Estimate Parameter of Bivariate Copula |

censReg | Censored Regression (Tobit) Models |

CensRegMod | Fits Normal and Student-t Censored Regression Model |

CensSpatial | Censored Spatial Models |

Census2016 | Data from the Australian Census 2016 |

censusapi | Retrieve Data from the Census APIs |

censusGeography | Changes United States Census Geographic Code into Name of Location |

censusr | Collect Data from the Census API |

censusxy | Access the U.S. Census Bureau's Geocoding A.P.I. System |

censys | Tools to Query the 'Censys' API |

centiserve | Find Graph Centrality Indices |

centralplot | Show the Strength of Relationships Between Centre and Peripheral Items |

centrifugeR | Non-Trivial Balance of Centrifuge Rotors |

CEoptim | Cross-Entropy R Package for Optimization |

CePa | Centrality-Based Pathway Enrichment |

cepiigeodist | CEPII's GeoDist Datasets |

CepLDA | Discriminant Analysis of Time Series in the Presence of Within-Group Spectral Variability |

cepp | Context Driven Exploratory Projection Pursuit |

cepR | Busca CEPs Brasileiros |

cepreader | Read 'CEP' and Legacy 'CANOCO' Files |

ceramic | Download Online Imagery Tiles |

CerioliOutlierDetection | Outlier Detection Using the Iterated RMCD Method of Cerioli (2010) |

CeRNASeek | Identification and Analysis of ceRNA Regulation |

cernn | Covariance Estimation Regularized by Nuclear Norm Penalties |

ceRtainty | Certainty Equivalent |

ceser | Cluster Estimated Standard Errors |

cetcolor | CET Perceptually Uniform Colour Maps |

ceterisParibus | Ceteris Paribus Profiles |

cfa | Configural Frequency Analysis (CFA) |

CFAcoop | Colony Formation Assay: Taking into Account Cellular Cooperation |

CFC | Cause-Specific Framework for Competing-Risk Analysis |

cfda | Categorical Functional Data Analysis |

cfdecomp | Counterfactual Decomposition: MC Integration of the G-Formula |

CfEstimateQuantiles | Estimate quantiles using any order Cornish-Fisher expansion |

CFF | Simple Similarity for User-Based Collaborative Filtering Systems |

cffdrs | Canadian Forest Fire Danger Rating System |

CFilt | Collaborative Filtering by Reference Classes |

cfma | Causal Functional Mediation Analysis |

cfmortality | Cystic Fibrosis Survival Prediction Model Based on Stanojevic Model |

cforward | Forward Selection using Concordance/C-Index |

cg | Compare Groups, Analytically and Graphically |

cgal4h | 'CGAL' Version 4 C++ Header Files |

cgam | Constrained Generalized Additive Model |

cgAUC | Calculate AUC-type measure when gold standard is continuous and the corresponding optimal linear combination of variables with respect to it |

cgdsr | R-Based API for Accessing the MSKCC Cancer Genomics Data Server (CGDS) |

CGE | Computing General Equilibrium |

CGGP | Composite Grid Gaussian Processes |

cghRA | Array CGH Data Analysis and Visualization |

cglasso | Conditional Graphical LASSO for Gaussian Graphical Models with Censored and Missing Values |

cglm | Fits Conditional Generalized Linear Models |

cgmanalysis | Clean and Analyze Continuous Glucose Monitor Data |

CGManalyzer | Continuous Glucose Monitoring Data Analyzer |

cgmquantify | Analyzing Glucose and Glucose Variability |

CGP | Composite Gaussian Process Models |

CGPfunctions | Powell Miscellaneous Functions for Teaching and Learning Statistics |

cgraph | Computational Graphs |

cgwtools | Miscellaneous Tools |

ChainLadder | Statistical Methods and Models for Claims Reserving in General Insurance |

chandwich | Chandler-Bate Sandwich Loglikelihood Adjustment |

changedetection | Nonparametric Change Detection in Multivariate Linear Relationships |

changepoint | Methods for Changepoint Detection |

changepoint.geo | Geometrically Inspired Multivariate Changepoint Detection |

changepoint.mv | Changepoint Analysis for Multivariate Time Series |

changepoint.np | Methods for Nonparametric Changepoint Detection |

changepointsHD | Change-Point Estimation for Expensive and High-Dimensional Models |

changepointsVar | Change-Points Detections for Changes in Variance |

ChangePointTaylor | Identify Changes in Mean |

ChangepointTesting | Change Point Estimation for Clustered Signals |

changer | Change R Package Name |

ChannelAttribution | Markov Model for Online Multi-Channel Attribution |

ChannelAttributionApp | Shiny Web Application for the Multichannel Attribution Problem |

Chaos01 | 0-1 Test for Chaos |

ChaosGame | Chaos Game |

ChargeTransport | Charge Transfer Rates and Charge Carrier Mobilities |

charlatan | Make Fake Data |

chartql | Simplified Language for Plots and Charts |

CHCN | Canadian Historical Climate Network |

cheatR | Catch Cheaters |

cheatsheet | Download R Cheat Sheets Locally |

cheb | Discrete Linear Chebyshev Approximation |

chebpol | Multivariate Interpolation |

checkarg | Check the Basic Validity of a (Function) Argument |

CheckDigit | Calculate and verify check digits |

checkdown | Check-Fields and Check-Boxes for 'rmarkdown' |

checkLuhn | Checks if a Number is Valid Using the Luhn Algorithm |

checkmate | Fast and Versatile Argument Checks |

checkpoint | Install Packages from Snapshots on the Checkpoint Server for Reproducibility |

checkr | Check the Properties of Common R Objects |

cheddar | Analysis and Visualisation of Ecological Communities |

cheese | Tools for Working with Data During Statistical Analysis |

chemCal | Calibration Functions for Analytical Chemistry |

chemmodlab | A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models |

chemometrics | Multivariate Statistical Analysis in Chemometrics |

ChemoSpec | Exploratory Chemometrics for Spectroscopy |

ChemoSpec2D | Exploratory Chemometrics for 2D Spectroscopy |

ChemoSpecUtils | Functions Supporting Packages ChemoSpec and ChemoSpec2D |

cherry | Multiple Testing Methods for Exploratory Research |

cherryblossom | Cherry Blossom Run Race Results |

chess | Read, Write, Create and Explore Chess Games |

chest | Change-in-Estimate Approach to Assess Confounding Effects |

CHFF | Closest History Flow Field Forecasting for Bivariate Time Series |

chi | The Chi Distribution |

chi2x3way | Partitioning Chi-Squared and Tau Index for Three-Way Contingency Tables |

chicane | Capture Hi-C Analysis Engine |

chickn | 'Compressive' Hierarchical Kernel Clustering Toolbox |

childdevdata | Child Development Data |

childesr | Accessing the 'CHILDES' Database |

childhoodmortality | Calculating Childhood Mortality Rates |

childsds | Data and Methods Around Reference Values in Pediatrics |

chilemapas | Mapas de las Divisiones Politicas y Administrativas de Chile (Maps of the Political and Administrative Divisions of Chile) |

ChillModels | Processing Chill and Heat Models for Temperate Fruit Trees |

chillR | Statistical Methods for Phenology Analysis in Temperate Fruit Trees |

chinese.misc | Miscellaneous Tools for Chinese Text Mining and More |

ChineseNames | Chinese Name Database 1930-2008 |

chipPCR | Toolkit of Helper Functions to Pre-Process Amplification Data |

ChIPtest | Nonparametric Methods for Identifying Differential Enrichment Regions with ChIP-Seq Data |

chirps | API Client for CHIRPS |

chisq.posthoc.test | A Post Hoc Analysis for Pearson's Chi-Squared Test for Count Data |

chk | Check User-Supplied Function Arguments |

chlorpromazineR | Convert Antipsychotic Doses to Chlorpromazine Equivalents |

CHMM | Coupled Hidden Markov Models |

CHNCapitalStock | Compute Chinese Capital Stocks |

chngpt | Estimation and Hypothesis Testing for Threshold Regression |

CHNOSZ | Thermodynamic Calculations and Diagrams for Geochemistry |

choiceDes | Design Functions for Choice Studies |

ChoiceModelR | Choice Modeling in R |

CHOIRBM | Plots the CHOIR Body Map |

cholera | Amend, Augment and Aid Analysis of John Snow's Cholera Map |

CholWishart | Cholesky Decomposition of the Wishart Distribution |

choplump | Choplump tests |

chopthin | The Chopthin Resampler |

ChoR | Chordalysis R Package |

chords | Estimation in Respondent Driven Samples |

choroplethr | Simplify the Creation of Choropleth Maps in R |

choroplethrAdmin1 | Contains an Administrative-Level-1 Map of the World |

choroplethrMaps | Contains Maps Used by the 'choroplethr' Package |

chorrrds | Music Chords Extraction |

christmas | Generation of Christmas Cards |

chromer | Interface to Chromosome Counts Database API |

chromoMap | Interactive Genomic Visualization of Biological Data |

chromseq | Split Chromosome 'Fasta' File |

chron | Chronological Objects which can Handle Dates and Times |

chronicle | Grammar for Creating R Markdown Reports |

CHsharp | Choi and Hall Style Data Sharpening |

chunked | Chunkwise Text-File Processing for 'dplyr' |

chunkhooks | Chunk Hooks for 'R Markdown' |

chunkR | Read Tables in Chunks |

CIAAWconsensus | Isotope Ratio Meta-Analysis |

ciccr | Causal Inference in Case-Control Studies |

cicerone | Provide Tours of 'Shiny' Applications |

CIEE | Estimating and Testing Direct Effects in Directed Acyclic Graphs using Estimating Equations |

cif | Cointegrated ICU Forecasting |

CIFsmry | Weighted summary of cumulative incidence functions |

cifti | Toolbox for Connectivity Informatics Technology Initiative ('CIFTI') Files |

ciftiTools | Tools for Reading and Visualizing CIFTI Brain Files |

CIM | Compositional Impact of Migration |

cimir | Interface to the CIMIS Web API |

CIMTx | Causal Inference for Multiple Treatments with a Binary Outcome |

cin | Causal Inference for Neuroscience |

cinaR | A Computational Pipeline for Bulk 'ATAC-Seq' Profiles |

cinaRgenesets | Ready-to-Use Curated Gene Sets for 'cinaR' |

CINID | Curculionidae INstar IDentification |

CINNA | Deciphering Central Informative Nodes in Network Analysis |

cinterpolate | Interpolation From C |

CIplot | Functions to Plot Confidence Interval |

cir | Centered Isotonic Regression and Dose-Response Utilities |

circacompare | Analyses of Circadian Data |

circglmbayes | Bayesian Analysis of a Circular GLM |

circletyper | Curve Text Elements in 'Shiny' Using 'CircleType.js' |

circlize | Circular Visualization |

CircMLE | Maximum Likelihood Analysis of Circular Data |

CircNNTSR | Statistical Analysis of Circular Data using Nonnegative Trigonometric Sums (NNTS) Models |

CircOutlier | Detection of Outliers in Circular-Circular Regression |

CircSpaceTime | Spatial and Spatio-Temporal Bayesian Model for Circular Data |

CircStats | Circular Statistics, from "Topics in Circular Statistics" (2001) |

circular | Circular Statistics |

CircularDDM | Circular Drift-Diffusion Model |

circularEV | Extreme Value Analysis for Circular Data |

circumplex | Analysis and Visualization of Circular Data |

cIRT | Choice Item Response Theory |

CISE | Common and Individual Structure Explained for Multiple Graphs |

CITAN | CITation ANalysis Toolpack |

citation | Software Citation Tools |

citbcmst | CIT Breast Cancer Molecular SubTypes Prediction |

citccmst | CIT Colon Cancer Molecular SubTypes Prediction |

citecorp | Client for the Open Citations Corpus |

ciTools | Confidence or Prediction Intervals, Quantiles, and Probabilities for Statistical Models |

CityPlot | Visualization of structure and contents of a database |

CityWaterBalance | Track Flows of Water Through an Urban System |

ciu | Contextual Importance and Utility |

ciuupi | Confidence Intervals Utilizing Uncertain Prior Information |

ciuupi2 | Kabaila and Giri (2009) Confidence Interval |

civis | R Client for the 'Civis Platform API' |

CJAMP | Copula-Based Joint Analysis of Multiple Phenotypes |

cjoint | AMCE Estimator for Conjoint Experiments |

ckanr | Client for the Comprehensive Knowledge Archive Network ('CKAN') API |

CKAT | Composite Kernel Association Test for Pharmacogenetics Studies |

CKLRT | Composite Kernel Machine Regression Based on Likelihood Ratio Test |

Ckmeans.1d.dp | Optimal, Fast, and Reproducible Univariate Clustering |

CLA | Critical Line Algorithm in Pure R |

Claddis | Measuring Morphological Diversity and Evolutionary Tempo |

cladoRcpp | C++ Implementations of Phylogenetic Cladogenesis Calculations |

ClaimsProblems | Analysis of Conflicting Claims |

clam | Classical Age-Depth Modelling of Cores from Deposits |

clampSeg | Idealisation of Patch Clamp Recordings |

ClamR | Time Series Modeling for Climate Change Proxies |

clarifai | Access to Clarifai API |

clarkeTest | Distribution-Free Tests of Non-Nested Models |

class | Functions for Classification |

ClassComparison | Classes and Methods for "Class Comparison" Problems on Microarrays |

ClassDiscovery | Classes and Methods for "Class Discovery" with Microarrays or Proteomics |

classGraph | Construct Graphs of S4 Class Hierarchies |

classifierplots | Generates a Visualization of Classifier Performance as a Grid of Diagnostic Plots |

classifly | Explore classification models in high dimensions |

classInt | Choose Univariate Class Intervals |

cld2 | Google's Compact Language Detector 2 |

cld3 | Google's Compact Language Detector 3 |

clda | Convolution-Based Linear Discriminant Analysis |

clean | Fast and Easy Data Cleaning |

CleanBSequences | Clean Biological Sequences |

cleancall | C Resource Cleanup via Exit Handlers |

cleandata | To Inspect and Manipulate Data; and to Keep Track of This Process |

cleaner | Fast and Easy Data Cleaning |

cleanerR | How to Handle your Missing Data |

cleangeo | Cleaning Geometries from Spatial Objects |

cleanNLP | A Tidy Data Model for Natural Language Processing |

cleanr | Helps You to Code Cleaner |

clere | Simultaneous Variables Clustering and Regression |

clespr | Composite Likelihood Estimation for Spatial Data |

clevr | Clustering and Link Prediction Evaluation in R |

clhs | Conditioned Latin Hypercube Sampling |

cli | Helpers for Developing Command Line Interfaces |

cliapp | Create Rich Command Line Applications |

ClickClust | Model-Based Clustering of Categorical Sequences |

ClickClustCont | Mixtures of Continuous Time Markov Models |

clickR | Semi-Automatic Preprocessing of Messy Data with Change Tracking for Dataset Cleaning |

clickstream | Analyzes Clickstreams Based on Markov Chains |

clifford | Arbitrary Dimensional Clifford Algebras |

clifro | Easily Download and Visualise Climate Data from CliFlo |

CliftLRD | Complex-Valued Wavelet Lifting Estimators of the Hurst Exponent for Irregularly Sampled Time Series |

clikcorr | Censoring Data and Likelihood-Based Correlation Estimation |

climaemet | Climate AEMET Tools |

climate | Interface to Download Meteorological (and Hydrological) Datasets |

climateStability | Estimating Climate Stability from Climate Model Data |

climatol | Climate Tools (Series Homogenization and Derived Products) |

climatrends | Climate Variability Indices for Ecological Modelling |

ClimClass | Climate Classification According to Several Indices |

climdex.pcic | PCIC Implementation of Climdex Routines |

ClimDown | Climate Downscaling Library for Daily Climate Model Output |

clime | Constrained L1-minimization for Inverse (covariance) Matrix Estimation |

climextRemes | Tools for Analyzing Climate Extremes |

ClimInd | Climate Indices |

ClimMobTools | API Client for the 'ClimMob' Platform |

ClimProjDiags | Set of Tools to Compute Various Climate Indices |

climwin | Climate Window Analysis |

clinDR | Simulation and Analysis Tools for Clinical Dose Response Modeling |

clinfun | Clinical Trial Design and Data Analysis Functions |

ClinicalTrialSummary | Summary Measures for Clinical Trials with Survival Outcomes |

ClinicalUtilityRecal | Recalibration Methods for Improved Clinical Utility of Risk Scores |

clinmon | Hemodynamic Calculations from Clinical Monitoring |

clinPK | Clinical Pharmacokinetics Toolkit |

clinsig | Clinical Significance Functions |

ClinSigMeasures | Clinical Significance Measures |

clinspacy | Clinical Natural Language Processing using 'spaCy', 'scispaCy', and 'medspaCy' |

clinUtiDNA | Clinical Utility of DNA Testing |

clipp | Calculating Likelihoods by Pedigree Paring |

clipr | Read and Write from the System Clipboard |

CliquePercolation | Clique Percolation for Networks |

clisymbols | Unicode Symbols at the R Prompt |

CLME | Constrained Inference for Linear Mixed Effects Models |

clock | Date-Time Types and Tools |

clogitboost | Boosting Conditional Logit Model |

clogitL1 | Fitting Exact Conditional Logistic Regression with Lasso and Elastic Net Penalties |

clogitLasso | Sparse Conditional Logistic Regression for Matched Studies |

CloneSeeker | Seeking and Finding Clones in Copy Number and Sequencing Data |

CLONETv2 | Clonality Estimates in Tumor |

clordr | Composite Likelihood Inference and Diagnostics for Replicated Spatial Ordinal Data |

cloudml | Interface to the Google Cloud Machine Learning Platform |

cloudUtil | Cloud Utilization Plots |

clpAPI | R Interface to C API of COIN-or Clp |

clr | Curve Linear Regression via Dimension Reduction |

CLSOCP | A smoothing Newton method SOCP solver |

clttools | Central Limit Theorem Experiments (Theoretical and Simulation) |

clubSandwich | Cluster-Robust (Sandwich) Variance Estimators with Small-Sample Corrections |

clue | Cluster Ensembles |

ClueR | Cluster Evaluation |

CluMP | Clustering of Micro Panel Data |

ClusBoot | Bootstrap Clustering |

cluscov | Clustered Covariate Regression |

clusrank | Wilcoxon Rank Tests for Clustered Data |

ClussCluster | Simultaneous Detection of Clusters and Cluster-Specific Genes in High-Throughput Transcriptome Data |

clust.bin.pair | Statistical Methods for Analyzing Clustered Matched Pair Data |

ClustAssess | Tools for Assessing Clustering |

ClustBlock | Clustering of Datasets |

clustcurv | Determining Groups in Multiples Curves |

clustDRM | Clustering Dose-Response Curves and Fitting Appropriate Models to Them |

clustEff | Clusters of Effects Curves in Quantile Regression Models |

cluster | "Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al. |

cluster.datasets | Cluster Analysis Data Sets |

Cluster.OBeu | Cluster Analysis 'OpenBudgets.eu' |

clusterability | Performs Tests for Cluster Tendency of a Data Set |

ClusterBootstrap | Analyze Clustered Data with Generalized Linear Models using the Cluster Bootstrap |

clusterCrit | Clustering Indices |

clusteredinterference | Causal Effects from Observational Studies with Clustered Interference |

ClusteredMutations | Location and Visualization of Clustered Somatic Mutations |

clusterGeneration | Random Cluster Generation (with Specified Degree of Separation) |

clusterGenomics | Identifying clusters in genomics data by recursive partitioning |

clusterhap | Clustering Genotypes in Haplotypes |

Clustering | Execution of Multiple Clustering Algorithm |

clustering.sc.dp | Optimal Distance-Based Clustering for Multidimensional Data with Sequential Constraint |

clustermole | Unbiased Single-Cell Transcriptomic Data Cell Type Identification |

clustermq | Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM, PBS/Torque) |

clusternomics | Integrative Clustering for Heterogeneous Biomedical Datasets |

clusternor | A Parallel Clustering Non-Uniform Memory Access ('NUMA') Optimized Package |

clusterPower | Power Calculations for Cluster-Randomized and Cluster-Randomized Crossover Trials |

ClusterR | Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans, K-Medoids and Affinity Propagation Clustering |

ClusterRankTest | Rank Tests for Clustered Data |

clusterRepro | Reproducibility of Gene Expression Clusters |

clusterSEs | Calculate Cluster-Robust p-Values and Confidence Intervals |

clusterSim | Searching for Optimal Clustering Procedure for a Data Set |

ClusterStability | Assessment of Stability of Individual Objects or Clusters in Partitioning Solutions |

clustertend | Check the Clustering Tendency |

clusteval | Evaluation of Clustering Algorithms |

ClustGeo | Hierarchical Clustering with Spatial Constraints |

ClustImpute | K-means clustering with build-in missing data imputation |

clustMD | Model Based Clustering for Mixed Data |

clustMixType | k-Prototypes Clustering for Mixed Variable-Type Data |

ClustMMDD | Variable Selection in Clustering by Mixture Models for Discrete Data |

ClustOfVar | Clustering of Variables |

ClusTorus | Clustering on the Torus by Conformal Prediction |

clusTransition | Monitor Changes in Cluster Solutions of Dynamic Datasets |

clustrd | Methods for Joint Dimension Reduction and Clustering |

clustree | Visualise Clusterings at Different Resolutions |

clustringr | Cluster Strings by Edit-Distance |

CLUSTShiny | Interactive Document for Working with Cluster Analysis |

clustsig | Significant Cluster Analysis |

ClustVarLV | Clustering of Variables Around Latent Variables |

clustvarsel | Variable Selection for Gaussian Model-Based Clustering |

ClusVis | Gaussian-Based Visualization of Gaussian and Non-Gaussian Model-Based Clustering |

clv | Cluster Validation Techniques |

clValid | Validation of Clustering Results |

CLVTools | Tools for Customer Lifetime Value Estimation |

cmaes | Covariance Matrix Adapting Evolutionary Strategy |

cmaesr | Covariance Matrix Adaptation Evolution Strategy |

CMapViz | Representation Tool For Output Of Connectivity Map (CMap) Analysis |

cmaRs | Implementation of the Conic Multivariate Adaptive Regression Splines in R |

CMatching | Matching Algorithms for Causal Inference with Clustered Data |

CMC | Cronbach-Mesbah Curve |

cmce | Computer Model Calibration for Deterministic and Stochastic Simulators |

cmcR | An Implementation of the 'Congruent Matching Cells' Method |

cmdfun | Framework for Building Interfaces to Shell Commands |

cmenet | Bi-Level Selection of Conditional Main Effects |

CMF | Collective Matrix Factorization |

cmfrec | Collective Matrix Factorization for Recommender Systems |

CMLS | Constrained Multivariate Least Squares |

cmm | Categorical Marginal Models |

cmmr | CEU Mass Mediator RESTful API |

cmna | Computational Methods for Numerical Analysis |

cmocean | Beautiful Colour Maps for Oceanography |

CMplot | Circle Manhattan Plot |

cmprsk | Subdistribution Analysis of Competing Risks |

cmprskcoxmsm | Use IPW to Estimate Treatment Effect under Competing Risks |

cmprskQR | Analysis of Competing Risks Using Quantile Regressions |

cmR | Analysis of Cardiac Magnetic Resonance Images |

cmrutils | Misc Functions of the Center for Mathematical Research |

cms | Calculate Medicare Reimbursement |

cmsaf | A Toolbox for CM SAF NetCDF Data |

cmsafops | Tools for CM SAF NetCDF Data |

cmsafvis | Tools to Visualize CM SAF NetCDF Data |

CMShiny | Interactive Document for Working with Confusion Matrix |

cmstatr | Statistical Methods for Composite Material Data |

cmvnorm | The Complex Multivariate Gaussian Distribution |

cna | Causal Modeling with Coincidence Analysis |

CNAIM | Common Network Asset Indices Methodology (CNAIM) |

cnaOpt | Optimizing Consistency and Coverage in Configurational Causal Modeling |

cnbdistr | Conditional Negative Binomial Distribution |

cncaGUI | Canonical Non-Symmetrical Correspondence Analysis in R |

CNLTreg | Complex-Valued Wavelet Lifting for Signal Denoising |

CNLTtsa | Complex-Valued Wavelet Lifting for Univariate and Bivariate Time Series Analysis |

CNOGpro | Copy Numbers of Genes in prokaryotes |

cNORM | Continuous Norming |

CNprep | Pre-process DNA Copy Number (CN) Data for Detection of CN Events |

CNull | Fast Algorithms for Frequency-Preserving Null Models in Ecology |

cnum | Chinese Numerals Processing |

CNVRG | Dirichlet-Multinomial Modelling of Relative Abundance Data |

CNVScope | A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization |

coala | A Framework for Coalescent Simulation |

coalescentMCMC | MCMC Algorithms for the Coalescent |

coalitions | Bayesian "Now-Cast" Estimation of Event Probabilities in Multi-Party Democracies |

coarseDataTools | Analysis of Coarsely Observed Data |

cobalt | Covariate Balance Tables and Plots |

cobiclust | Biclustering via Latent Block Model Adapted to Overdispersed Count Data |

COBRA | Nonlinear Aggregation of Predictors |

cobs | Constrained B-Splines (Sparse Matrix Based) |

coca | Cluster-of-Clusters Analysis |

cocktailApp | 'shiny' App to Discover Cocktails |

CoClust | Copula Based Cluster Analysis |

COCONUT | COmbat CO-Normalization Using conTrols (COCONUT) |

cocor | Comparing Correlations |

cocorresp | Co-Correspondence Analysis Methods |

cocron | Statistical Comparisons of Two or more Alpha Coefficients |

coda | Output Analysis and Diagnostics for MCMC |

coda.base | A Basic Set of Functions for Compositional Data Analysis |

codadiags | Markov chain Monte Carlo burn-in based on "bridge" statistics |

codalm | Transformation-Free Linear Regression for Compositional Outcomes and Predictors |

CodataGS | Genomic Prediction Using SNP Codata |

cOde | Automated C Code Generation for 'deSolve', 'bvpSolve' |

codebook | Automatic Codebooks from Metadata Encoded in Dataset Attributes |

codebreaker | Retro Logic Game |

codeCollection | Collection of Codes with Labels |

CodeDepends | Analysis of R Code for Reproducible Research and Code Comprehension |

codemetar | Generate 'CodeMeta' Metadata for R Packages |

codename | Generation of Code Names for Organizations, People, Projects, and Whatever Else |

codep | Multiscale Codependence Analysis |

coder | Deterministic Categorization of Items Based on External Code Data |

codetools | Code Analysis Tools for R |

codexcopd | The CODEX (Comorbidity, Obstruction, Dyspnea, and Previous Severe Exacerbations) Index: Short and Medium-Term Prognosis in Patients Hospitalized for Chronic Obstructive Pulmonary Disease (COPD) Exacerbations |

codified | Produce Standard/Formalized Demographics Tables |

CoDiNA | Co-Expression Differential Network Analysis |

codingMatrices | Alternative Factor Coding Matrices for Linear Model Formulae |

codyn | Community Dynamics Metrics |

coefficientalpha | Robust Coefficient Alpha and Omega with Missing and Non-Normal Data |

coefplot | Plots Coefficients from Fitted Models |

coenocliner | Coenocline Simulation |

coenoflex | Gradient-Based Coenospace Vegetation Simulator |

coexist | Species coexistence modeling and analysis |

cofad | Contrast Analyses for Factorial Designs |

cofeatureR | Generate Cofeature Matrices |

CoFRA | Complete Functional Regulation Analysis |

coga | Convolution of Gamma Distributions |

cogmapr | Cognitive Mapping Tools Based on Coding of Textual Sources |

cognitoR | Authentication for 'Shiny' Apps with 'Amazon Cognito' |

CohortPlat | Simulation of Cohort Platform Trials for Combination Treatments |

cohorttools | Cohort Data Analyses |

coil | Contextualization and Evaluation of COI-5P Barcode Data |

CoImp | Copula Based Imputation Method |

coin | Conditional Inference Procedures in a Permutation Test Framework |

coinmarketcapr | Get 'Cryptocurrencies' Market Cap Prices from Coin Market Cap |

CoinMinD | Simultaneous Confidence Interval for Multinomial Proportion |

Coinprofile | Coincident Profile |

cointmonitoR | Consistent Monitoring of Stationarity and Cointegrating Relationships |

cointReg | Parameter Estimation and Inference in a Cointegrating Regression |

cold | Count Longitudinal Data |

colf | Constrained Optimization on Linear Function |

collapse | Advanced and Fast Data Transformation |

CollapseLevels | Collapses Levels, Computes Information Value and WoE |

collapsibleTree | Interactive Collapsible Tree Diagrams using 'D3.js' |

collectArgs | Quickly and Neatly Collect Arguments from One Environment to Pass to Another |

collections | High Performance Container Data Types |

collector | Quantified Risk Assessment Data Collection |

collidr | Check for Namespace Collisions Across Packages and Functions on CRAN |

collin | Effects of Collinearity in Distributed Lag and Other Models |

CollocInfer | Collocation Inference for Dynamic Systems |

collpcm | Collapsed Latent Position Cluster Model for Social Networks |

collUtils | Auxiliary Package for Package 'CollapsABEL' |

colmozzie | Dengue Cases and Climate Variables in Colombo Sri Lanka |

coloc | Colocalisation Tests of Two Genetic Traits |

colocalization | Normalized Spatial Intensity Correlation |

colocalized | Clusters of Colocalized Sequences |

colocr | Conduct Co-Localization Analysis of Fluorescence Microscopy Images |

colorBlindness | Safe Color Set for Color Blindness |

colorDF | Colorful Data Frames in R Terminal |

colordistance | Distance Metrics for Image Color Similarity |

coloredICA | Implementation of Colored Independent Component Analysis and Spatial Colored Independent Component Analysis |

colorednoise | Simulate Temporally Autocorrelated Populations |

colorfindr | Extract Colors from Windows BMP, JPEG, PNG, TIFF, and SVG Format Images |

colorfulVennPlot | Plot and add custom coloring to Venn diagrams for 2-dimensional, 3-dimensional and 4-dimensional data |

colorhcplot | Colorful Hierarchical Clustering Dendrograms |

colorist | Coloring Wildlife Distributions in Space-Time |

colorizer | Colorize Old Images Using the 'DeOldify' Image Colorization API |

colormap | Color Palettes using Colormaps Node Module |

ColorPalette | Color Palettes Generator |

colorpatch | Optimized Rendering of Fold Changes and Confidence Values |

colorr | Color Palettes for EPL, MLB, NBA, NHL, and NFL Teams |

colorRamps | Builds color tables |

colorscience | Color Science Methods and Data |

colorspace | A Toolbox for Manipulating and Assessing Colors and Palettes |

colorSpec | Color Calculations with Emphasis on Spectral Data |

colortools | Tools for colors in a Hue-Saturation-Value (HSV) color model |

colourlovers | R Client for the COLOURlovers API |

colourpicker | A Colour Picker Tool for Shiny and for Selecting Colours in Plots |

colourvalues | Assigns Colours to Values |

colourvision | Colour Vision Models |

colr | Functions to Select and Rename Data |

colt | Command-Line Color Themes |

comat | Creates Co-Occurrence Matrices of Spatial Data |

comato | Analysis of Concept Maps and Concept Landscapes |

COMBAT | A Combined Association Test for Genes using Summary Statistics |

combinat | combinatorics utilities |

combinedevents | Calculate Scores and Marks for Track and Field Combined Events |

CombinePortfolio | Estimation of Optimal Portfolio Weights by Combining Simple Portfolio Strategies |

CombinePValue | Combine a Vector of Correlated p-values |

CombinS | Construction Methods of some Series of PBIB Designs |

combiter | Combinatorics Iterators |

CombMSC | Combined Model Selection Criteria |

comclim | Community Climate Statistics |

cometExactTest | Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm |

cometr | 'Comet' API for R |

comf | Models and Equations for Human Comfort Research |

comFuncs | Commonly Used Functions for R Shiny Applications |

ComICS | Computational Methods for Immune Cell-Type Subsets |

CoMiRe | Convex Mixture Regression |

commandr | Command pattern in R |

CommEcol | Community Ecology Analyses |

commentr | Print Nicely Formatted Comments for Use in Script Files |

CommonJavaJars | Useful Libraries for Building a Java Based GUI under R |

commonmark | High Performance CommonMark and Github Markdown Rendering in R |

CommonMean.Copula | Common Mean Vector under Copula Models |

commonsMath | JAR Files of the Apache Commons Mathematics Library |

CommT | Comparative Phylogeographic Analysis using the Community Tree Framework |

communication | Feature Extraction and Model Estimation for Audio of Human Speech |

CommunityCorrelogram | Ecological Community Correlogram |

comorbidity | Computing Comorbidity Scores |

Comp2ROC | Compare Two ROC Curves that Intersect |

Compack | Regression with Compositional Covariates |

compactr | Creates empty plots with compact axis notation |

comparator | Comparison Functions for Clustering and Record Linkage |

compare | Comparing Objects for Differences |

compareC | Compare Two Correlated C Indices with Right-censored Survival Outcome |

CompareCausalNetworks | Interface to Diverse Estimation Methods of Causal Networks |

CompAREdesign | Statistical Functions for the Design of Studies with Composite Endpoints |

compareDF | Do a Git Style Diff of the Rows Between Two Dataframes with Similar Structure |

compareGroups | Descriptive Analysis by Groups |

compareODM | comparison of medical forms in CDISC ODM format |

comparer | Compare Output and Run Time |

CompareTests | Correct for Verification Bias in Diagnostic Accuracy & Agreement |

comparison | Multivariate Likelihood Ratio Calculation and Evaluation |

ComparisonCR | Comparison of Cumulative Incidence Between Two Groups Under Competing Risks |

ComparisonSurv | Comparison of Survival Curves Between Two Groups |

compas | Conformational Manipulations of Protein Atomic Structures |

CompDist | Multisection Composite Distributions |

compendiumdb | Tools for Retrieval and Storage of Functional Genomics Data |

comperank | Ranking Methods for Competition Results |

comperes | Manage Competition Results |

competitiontoolbox | A Graphical User Interface for Antitrust and Trade Practitioners |

compHclust | Complementary Hierarchical Clustering |

Compind | Composite Indicators Functions |

completejourney | Retail Shopping Data |

complexity | Calculate the Proportion of Permutations in Line with an Informative Hypothesis |

complexNet | Complex Network Generation |

complexplus | Functions of Complex or Real Variable |

ComplexUpset | Create Complex UpSet Plots Using 'ggplot2' Components |

complmrob | Robust Linear Regression with Compositional Data as Covariates |

CompLognormal | Functions for actuarial scientists |

CompModels | Pseudo Computer Models for Optimization |

COMPoissonReg | Conway-Maxwell Poisson (COM-Poisson) Regression |

Compositional | Compositional Data Analysis |

compositions | Compositional Data Analysis |

composits | Compositional, Multivariate and Univariate Time Series Outlier Ensemble |

compound.Cox | Univariate Feature Selection and Compound Covariate for Predicting Survival |

CompoundEvents | Statistical Modeling of Compound Events |

Compounding | Computing Continuous Distributions |

CompQuadForm | Distribution Function of Quadratic Forms in Normal Variables |

CompR | Paired Comparison Data Analysis |

CompRandFld | Composite-Likelihood Based Analysis of Random Fields |

comprehenr | List Comprehensions |

compstatr | Tools for St. Louis Crime Data |

compute.es | Compute Effect Sizes |

comsimitv | Flexible Framework for Simulating Community Assembly |

comtradr | Interface with the United Nations Comtrade API |

con2aqi | Calculate the AQI from Pollutant Concentration |

con2lki | Calculate the Dutch Air Quality Index (LKI) |

Conake | Continuous Associated Kernel Estimation |

concatenate | Human-Friendly Text from Unknown Strings |

concaveman | A Very Fast 2D Concave Hull Algorithm |

conclust | Pairwise Constraints Clustering |

ConConPiWiFun | Optimisation with Continuous Convex Piecewise (Linear and Quadratic) Functions |

concordance | Product Concordance |

ConcordanceTest | An Alternative to the Kruskal-Wallis Based on the Kendall Tau Distance |

concorR | CONCOR and Supplemental Functions |

concreg | Concordance Regression |

CONCUR | Copy Number Profile Curve-Based Association Test |

concurve | Computes & Plots Compatibility (Confidence), Surprisal, & Likelihood Distributions |

cond | Approximate Conditional Inference for Logistic and Loglinear Models |

condformat | Conditional Formatting in Data Frames |

condGEE | Parameter estimation in conditional GEE for recurrent event gap times |

CondIndTests | Nonlinear Conditional Independence Tests |

condir | Computation of P Values and Bayes Factors for Conditioning Data |

conditionz | Control How Many Times Conditions are Thrown |

condmixt | Conditional Density Estimation with Neural Network Conditional Mixtures |

condMVNorm | Conditional Multivariate Normal Distribution |

CondReg | Condition Number Regularized Covariance Estimation |

condSURV | Estimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data |

condTruncMVN | Conditional Truncated Multivariate Normal Distribution |

condusco | Query-Driven Pipeline Execution and Query Templates |

condvis | Conditional Visualization for Statistical Models |

condvis2 | Interactive Conditional Visualization for Supervised and Unsupervised Models in Shiny |

coneproj | Primal or Dual Cone Projections with Routines for Constrained Regression |

conf | Visualization and Analysis of Statistical Measures of Confidence |

conf.design | Construction of factorial designs |

confidence | Confidence Estimation of Environmental State Classifications |

config | Manage Environment Specific Configuration Values |

ConfigParser | Package to Parse an INI File, Including Variable Interpolation |

configr | An Implementation of Parsing and Writing Configuration File (JSON/INI/YAML/TOML) |

configural | Multivariate Profile Analysis |

confinterpret | Descriptive Interpretations of Confidence Intervals |

confintr | Confidence Intervals |

ConfIntVariance | Confidence Interval for the Univariate Population Variance without Normality Assumption |

conflicted | An Alternative Conflict Resolution Strategy |

conflr | Client for 'Confluence' API |

conformalClassification | Transductive and Inductive Conformal Predictions for Classification Problems |

ConfoundedMeta | Sensitivity Analyses for Unmeasured Confounding in Meta-Analyses |

confoundr | Diagnostics for Confounding of Time-Varying and Other Joint Exposures |

confreq | Configural Frequencies Analysis Using Log-Linear Modeling |

confSAM | Estimates and Bounds for the False Discovery Proportion, by Permutation |

CongreveLamsdell2016 | Distance Metrics for Trees Generated by Congreve and Lamsdell |

conicfit | Algorithms for Fitting Circles, Ellipses and Conics Based on the Work by Prof. Nikolai Chernov |

conics | Plot Conics |

Conigrave | Flexible Tools for Multiple Imputation |

conjoint | An Implementation of Conjoint Analysis Method |

ConjointChecks | A package to check the cancellation axioms of conjoint measurement |

conjurer | A Parametric Method for Generating Synthetic Data |

connections | Integrates with the 'RStudio' Connections Pane and 'pins' |

ConnMatTools | Tools for Working with Connectivity Data |

conogive | Congeneric Normal-Ogive Model |

conos | Clustering on Network of Samples |

conover.test | Conover-Iman Test of Multiple Comparisons Using Rank Sums |

conquer | Convolution-Type Smoothed Quantile Regression |

conquestr | An R Front End for 'ACER ConQuest' |

ConR | Computation of Parameters Used in Preliminary Assessment of Conservation Status |

ConSpline | Partial Linear Least-Squares Regression using Constrained Splines |

ConsRank | Compute the Median Ranking(s) According to the Kemeny's Axiomatic Approach |

ConsReg | Fits Regression & ARMA Models Subject to Constraints to the Coefficient |

constants | Reference on Constants, Units and Uncertainty |

constellation | Identify Event Sequences Using Time Series Joins |

constrainedKriging | Constrained, Covariance-Matching Constrained and Universal Point or Block Kriging |

conStruct | Models Spatially Continuous and Discrete Population Genetic Structure |

contact | Creating Contact and Social Networks |

contactdata | Social Contact Matrices for 152 Countries |

container | Deque, Set, and Dict - R6 Based Container Classes with Iterators |

ContaminatedMixt | Clustering and Classification with the Contaminated Normal |

contentid | An Interface for Content-Based Identifiers |

contextual | Simulation and Analysis of Contextual Multi-Armed Bandit Policies |

contfrac | Continued Fractions |

conting | Bayesian Analysis of Contingency Tables |

contingency | Discrete Multivariate Probability Distributions |

contoureR | Contouring of Non-Regular Three-Dimensional Data |

ContourFunctions | Create Contour Plots from Data or a Function |

contourPlot | Plots x,y,z Co-Ordinates in a Contour Map |

contrast | A Collection of Contrast Methods |

contribution | A Tiny Contribution Table Generator Based on 'ggplot2' |

control | A Control Systems Toolbox |

controlTest | Quantile Comparison for Two-Sample Right-Censored Survival Data |

ConvergenceClubs | Finding Convergence Clubs |

ConvergenceConcepts | Seeing Convergence Concepts in Action |

convergEU | Monitoring Convergence of EU Countries |

convertGraph | Convert Graphical Files Format |

convertr | Convert Between Units |

convevol | Analysis of Convergent Evolution |

convexjlr | Disciplined Convex Programming in R using 'Convex.jl' |

convey | Income Concentration Analysis with Complex Survey Samples |

Convolutioner | Convolution of Data |

convoSPAT | Convolution-Based Nonstationary Spatial Modeling |

cooccur | Probabilistic Species Co-Occurrence Analysis in R |

cooccurNet | Co-Occurrence Network |

CoOL | Causes of Outcome Learning |

coop | Co-Operation: Fast Covariance, Correlation, and Cosine Similarity Operations |

CoopGame | Important Concepts of Cooperative Game Theory |

coopProductGame | Cooperative Aspects of Linear Production Programming Problems |

cooptrees | Cooperative aspects of optimal trees in weighted graphs |

CoordinateCleaner | Automated Cleaning of Occurrence Records from Biological Collections |

copBasic | General Bivariate Copula Theory and Many Utility Functions |

copCAR | Fitting the copCAR Regression Model for Discrete Areal Data |

CopCTS | Copula-Based Semiparametric Analysis for Time Series Data with Detection Limits |

cope | Coverage Probability Excursion (CoPE) Sets |

copent | Estimating Copula Entropy and Transfer Entropy |

coppeCosenzaR | COPPE-Cosenza Fuzzy Hierarchy Model |

coprimary | Sample Size Calculation for Two Primary Time-to-Event Endpoints in Clinical Trials |

cops | Cluster Optimized Proximity Scaling |

copula | Multivariate Dependence with Copulas |

Copula.Markov | Copula-Based Estimation and Statistical Process Control for Serially Correlated Time Series |

Copula.Markov.survival | Copula Markov Model with Dependent Censoring |

Copula.surv | Association Analysis of Bivariate Survival Data Based on Copulas |

CopulaCenR | Copula-Based Regression Models for Bivariate Censored Data |

copulaData | Data Sets for Copula Modeling |

CopulaDTA | Copula Based Bivariate Beta-Binomial Model for Diagnostic Test Accuracy Studies |

copulaedas | Estimation of Distribution Algorithms Based on Copulas |

copulareg | Copula Regression |

CopulaREMADA | Copula Mixed Models for Multivariate Meta-Analysis of Diagnostic Test Accuracy Studies |

CopyDetect | Computing Response Similarity Indices for Multiple-Choice Tests |

cora | Cora Data for Entity Resolution |

coRanking | Co-Ranking Matrix |

corazon | Apply 'colorffy' Color Gradients Within 'shiny' Elements |

Corbi | Collection of Rudimentary Bioinformatics Tools |

CorBin | Generate High-Dimensional Binary Data with Correlation Structures |

corclass | Correlational Class Analysis |

cord | Community Estimation in G-Models via CORD |

CorDiff | Set-Based Differential Covariance Testing for Genomics |

cordillera | Calculation of the OPTICS Cordillera |

CORE | Cores of Recurrent Events |

coreCT | Programmatic Analysis of Sediment Cores Using Computed Tomography Imaging |

corehunter | Multi-Purpose Core Subset Selection |

CORElearn | Classification, Regression and Feature Evaluation |

corels | R Binding for the 'Certifiably Optimal RulE ListS (Corels)' Learner |

coreNLP | Wrappers Around Stanford CoreNLP Tools |

coreSim | Core Functionality for Simulating Quantities of Interest from Generalised Linear Models |

coreTDT | TDT for compound heterozygous and recessive models |

corHMM | Hidden Markov Models of Character Evolution |

corkscrew | Preprocessor for Data Modeling |

corlink | Record Linkage, Incorporating Imputation for Missing Agreement Patterns, and Modeling Correlation Patterns Between Fields |

CORM | The Clustering of Regression Models Method |

corncob | Count Regression for Correlated Observations with the Beta-Binomial |

CornerstoneR | Collection of Scripts for Interface Between 'Cornerstone' and 'R' |

cornet | Elastic Net with Dichotomised Outcomes |

coro | 'Coroutines' for R |

coroICA | Confounding Robust Independent Component Analysis for Noisy and Grouped Data |

corona | Coronavirus ('Rona') Data Exploration |

coronavirus | The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Dataset |

corpcor | Efficient Estimation of Covariance and (Partial) Correlation |

corpora | Statistics and Data Sets for Corpus Frequency Data |

CorporaCoCo | Corpora Co-Occurrence Comparison |

corporaexplorer | A 'Shiny' App for Exploration of Text Collections |

CoRpower | Power Calculations for Assessing Correlates of Risk in Clinical Efficacy Trials |

corpus | Text Corpus Analysis |

corpustools | Managing, Querying and Analyzing Tokenized Text |

corr2D | Implementation of 2D Correlation Analysis in R |

corrarray | Correlation Arrays and 2-Sample Correlation Matrices |

CorrBin | Nonparametrics with Clustered Binary and Multinomial Data |

corrcoverage | Correcting the Coverage of Credible Sets from Bayesian Genetic Fine Mapping |

corrDNA | Finding Associations in Position-Wise Aligned DNA Sequence Dataset |

correctedAUC | Correcting AUC for Measurement Error |

CorrectedFDR | Correcting False Discovery Rates |

CorrectOverloadedPeaks | Correct Overloaded Peaks from GC-APCI-MS Data |

corregp | Functions and Methods for Correspondence Regression |

correlation | Methods for Correlation Analysis |

correlationfunnel | Speed Up Exploratory Data Analysis (EDA) with the Correlation Funnel |

correlbinom | Correlated Binomial Probabilities |

corrgram | Plot a Correlogram |

corrgrapher | Explore Correlations Between Variables in a Machine Learning Model |

CorrMixed | Estimate Correlations Between Repeatedly Measured Endpoints (E.g., Reliability) Based on Linear Mixed-Effects Models |

corrplot | Visualization of a Correlation Matrix |

corrr | Correlations in R |

corrsieve | CorrSieve |

CorrToolBox | Modeling Correlational Magnitude Transformations in Discretization Contexts |

corset | Arbitrary Bounding of Series and Time Series Objects |

cort | Some Empiric and Nonparametric Copula Models |

corTest | Robust Tests for Equal Correlation |

corto | Inference of Gene Regulatory Networks |

corTools | Tools for processing data after a Genome Wide Association Study |

corx | Create and Format Correlation Matrices |

cosa | Bound Constrained Optimal Sample Allocation |

COSINE | COndition SpecIfic sub-NEtwork |

cosinor | Tools for estimating and predicting the cosinor model |

cosinor2 | Extended Tools for Cosinor Analysis of Rhythms |

cosmoFns | Functions for cosmological distances, times, luminosities, etc |

CoSMoS | Complete Stochastic Modelling Solution |

cosso | Fit Regularized Nonparametric Regression Models Using COSSO Penalty |

COST | Copula-Based Semiparametric Models for Spatio-Temporal Data |

costat | Time Series Costationarity Determination |

costsensitive | Cost-Sensitive Multi-Class Classification |

CosW | The CosW Distribution |

cotram | Count Transformation Models |

cotrend | Consistent Co-Trending Rank Selection |

couchDB | Connect to and Work with CouchDB Databases |

COUNT | Functions, Data and Code for Count Data |

countcolors | Locates and Counts Pixels Within Color Range(s) in Images |

countdata | The Beta-Binomial Test for Count Data |

Counterfactual | Estimation and Inference Methods for Counterfactual Analysis |

countfitteR | Comprehensive Automatized Evaluation of Distribution Models for Count Data |

countgmifs | Discrete Response Regression for High-Dimensional Data |

countHMM | Penalized Estimation of Flexible Hidden Markov Models for Time Series of Counts |

Countr | Flexible Univariate Count Models Based on Renewal Processes |

countrycode | Convert Country Names and Country Codes |

CountsEPPM | Mean and Variance Modeling of Count Data |

countToFPKM | Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM) |

countTransformers | Transform Counts in RNA-Seq Data Analysis |

countyfloods | Quantify United States County-Level Flood Measurements |

countytimezones | Convert from UTC to Local Time for United States Counties |

countyweather | Compiles Meterological Data for U.S. Counties |

COUSCOus | A Residue-Residue Contact Detecting Method |

covafillr | Local Polynomial Regression of State Dependent Covariates in State-Space Models |

covatest | Tests on Properties of Space-Time Covariance Functions |

covBM | Brownian Motion Processes for 'nlme'-Models |

CovCombR | Combine Partial Covariance / Relationship Matrices |

coveffectsplot | Produce Forest Plots to Visualize Covariate Effects |

covequal | Test for Equality of Covariance Matrices |

covfefe | Covfefy Any Word, Sentence or Speech |

covglasso | Sparse Covariance Matrix Estimation |

COVID19 | R Interface to COVID-19 Data Hub |

covid19.analytics | Load and Analyze Live Data from the CoViD-19 Pandemic |

covid19br | Brazilian COVID-19 Pandemic Data |

covid19dbcand | Selected 'Drugbank' Drugs for COVID-19 Treatment Related Data in R Format |

covid19france | Cases of COVID-19 in France |

covid19italy | The 2019 Novel Coronavirus COVID-19 (2019-nCoV) Italy Dataset |

covid19jp | Japanese Covid-19 Datasets |

covid19sf | The Covid19 San Francisco Dataset |

covid19swiss | COVID-19 Cases in Switzerland and Principality of Liechtenstein |

covid19us | Cases of COVID-19 in the United States |

COVIDIBGE | Downloading, Reading and Analysing PNAD COVID19 Microdata |

CovidMutations | Mutation Analysis Toolkit for COVID-19 (Coronavirus Disease 2019) |

covidprobability | Estimate the Unit-Wide Probability of COVID-19 |

covidsymptom | COVID Symptom Study Sweden Open Dataset |

covLCA | Latent Class Models with Covariate Effects on Underlying and Measured Variables |

covr | Test Coverage for Packages |

covreg | A simultaneous regression model for the mean and covariance |

covRobust | Robust Covariance Estimation via Nearest Neighbor Cleaning |

CovSel | Model-Free Covariate Selection |

CovSelHigh | Model-Free Covariate Selection in High Dimensions |

covsep | Tests for Determining if the Covariance Structure of 2-Dimensional Data is Separable |

covsim | VITA and IG Simulation for Given Covariance and Marginals |

covTestR | Covariance Matrix Tests |

CovTools | Statistical Tools for Covariance Analysis |

cowbell | Performs Segmented Linear Regression on Two Independent Variables |

cowplot | Streamlined Plot Theme and Plot Annotations for 'ggplot2' |

cowsay | Messages, Warnings, Strings with Ascii Animals |

coxed | Duration-Based Quantities of Interest for the Cox Proportional Hazards Model |

CoxICPen | Variable Selection for Cox's Model with Interval-Censored Data |

coxinterval | Cox-Type Models for Interval-Censored Data |

coxme | Mixed Effects Cox Models |

coxmeg | Cox Mixed-Effects Models for Genome-Wide Association Studies |

coxphf | Cox Regression with Firth's Penalized Likelihood |

CoxPhLb | Analyzing Right-Censored Length-Biased Data |

coxphMIC | Sparse Estimation of Cox Proportional Hazards Models via Approximated Information Criterion |

coxphSGD | Stochastic Gradient Descent log-Likelihood Estimation in Cox Proportional Hazards Model |

coxphw | Weighted Estimation in Cox Regression |

CoxPlus | Cox Regression (Proportional Hazards Model) with Multiple Causes and Mixed Effects |

CoxR2 | R-Squared Measure Based on Partial LR Statistic, for the Cox PH Regression Model |

coxrobust | Robust Estimation in Cox Model |

coxrt | Cox Proportional Hazards Regression for Right-Truncated Data |

coxsei | Fitting a CoxSEI Model |

CP | Conditional Power Calculations |

cp4p | Calibration Plot for Proteomics |

cpa | Confirmatory Path Analysis through the d-sep tests |

CPAT | Change Point Analysis Tests |

CPBayes | Bayesian Meta Analysis for Studying Cross-Phenotype Genetic Associations |

cpca | Methods to perform Common Principal Component Analysis (CPCA) |

cPCG | Efficient and Customized Preconditioned Conjugate Gradient Method for Solving System of Linear Equations |

cpd | Complex Pearson Distributions |

CPE | Concordance Probability Estimates in Survival Analysis |

CpGassoc | Association Between Methylation and a Phenotype of Interest |

CpGFilter | CpG Filtering Method Based on Intra-Class Correlation Coefficients |

cpk | Clinical Pharmacokinetics |

cplexAPI | R Interface to C API of IBM ILOG CPLEX |

cplm | Compound Poisson Linear Models |

cpm | Sequential and Batch Change Detection Using Parametric and Nonparametric Methods |

CPMCGLM | Correction of the P-Value after Multiple Coding in Generalized Linear Models |

CPP | Composition of Probabilistic Preferences (CPP) |

cpp11 | A C++11 Interface for R's C Interface |

cppRouting | Fast Implementation of Dijkstra Algorithm |

cpr | Control Polygon Reduction |

Cprob | The Conditional Probability Function of a Competing Event |

cprobit | Conditional Probit Model for Analysing Continuous Outcomes |

cprr | Functions for Working with Danish CPR Numbers |

cpss | Change-Point Detection by Sample-Splitting Methods |

CPsurv | Nonparametric Change Point Estimation for Survival Data |

cpsurvsim | Simulating Survival Data from Change-Point Hazard Distributions |

cpsvote | A Toolbox for Using the CPS’s Voting and Registration Supplement |

cpt | Classification Permutation Test |

cptcity | 'cpt-city' Colour Gradients |

cptec | An Interface to the 'CPTEC/INPE' API |

cqcr | Access 'Care Quality Commission' Data |

cqrReg | Quantile, Composite Quantile Regression and Regularized Versions |

cquad | Conditional Maximum Likelihood for Quadratic Exponential Models for Binary Panel Data |

CRAC | Cosmology R Analysis Code |

cragg | Tests for Weak Instruments in R |

cramer | Multivariate Nonparametric Cramer-Test for the Two-Sample-Problem |

crandep | Network Analysis of Dependencies of CRAN Packages |

crank | Completing Ranks |

cranlike | Tools for 'CRAN'-Like Repositories |

cranlogs | Download Logs from the 'RStudio' 'CRAN' Mirror |

cranly | Package Directives and Collaboration Networks in CRAN |

CRANsearcher | RStudio Addin for Searching Packages in CRAN Database Based on Keywords |

crantastic | Various R tools for http://crantastic.org/ |

crassmat | Conditional Random Sampling Sparse Matrices |

crawl | Fit Continuous-Time Correlated Random Walk Models to Animal Movement Data |

crayon | Colored Terminal Output |

crch | Censored Regression with Conditional Heteroscedasticity |

CREAM | Clustering of Genomic Regions Analysis Method |

credentials | Tools for Managing SSH and Git Credentials |

CreditMetrics | Functions for calculating the CreditMetrics risk model |

creditmodel | Toolkit for Credit Modeling, Analysis and Visualization |

CreditRisk | Evaluation of Credit Risk with Structural and Reduced Form Models |

credsubs | Credible Subsets |

credule | Credit Default Swap Functions |

cregg | Simple Conjoint Tidying, Analysis, and Visualization |

cRegulome | Obtain and Visualize Regulome-Gene Expression Correlations in Cancer |

CRF | Conditional Random Fields |

crfsuite | Conditional Random Fields for Labelling Sequential Data in Natural Language Processing |

cricketr | Analyze Cricketers and Cricket Teams Based on ESPN Cricinfo Statsguru |

crimCV | Group-Based Modelling of Longitudinal Data |

crimedata | Access Crime Data from the Open Crime Database |

crimelinkage | Statistical Methods for Crime Series Linkage |

crimeutils | A Comprehensive Set of Functions to Clean, Analyze, and Present Crime Data |

crisp | Fits a Model that Partitions the Covariate Space into Blocks in a Data- Adaptive Way |

crispRdesignR | Guide Sequence Design for CRISPR/Cas9 |

criticalpath | An Implementation of the Critical Path Method |

CRM | Continual Reassessment Method (CRM) for Phase I Clinical Trials |

crminer | Fetch 'Scholary' Full Text from 'Crossref' |

crmn | CCMN and Other Normalization Methods for Metabolomics Data |

crmPack | Object-Oriented Implementation of CRM Designs |

crmReg | Cellwise Robust M-Regression and SPADIMO |

crn | Downloads and Builds datasets for Climate Reference Network |

crochet | Implementation Helper for '[' and '[<-' of Custom Matrix-Like Types |

cromwellDashboard | A Dashboard to Visualize Scientific Workflows in 'Cromwell' |

Cronbach | Cronbach's Alpha |

crone | Structural Crystallography in 1d |

cronologia | Create an HTML Vertical Timeline from a Data Frame in 'rmarkdown' and 'shiny' |

cronR | Schedule R Scripts and Processes with the 'cron' Job Scheduler |

crop | Graphics Cropping Tool |

cropdatape | Open Data of Agricultural Production of Crops of Peru |

cropDemand | Spatial Crop Water Demand for Brazil |

CropDetectR | Crop Row Detector |

CropScapeR | Access Cropland Data Layer Data via the 'CropScape' Web Service |

cropZoning | Climate Crop Zoning Based in Air Temperature for Brazil |

crossdes | Construction of Crossover Designs |

crossmap | Apply Functions to All Combinations of List Elements |

crossmatch | The Cross-match Test |

Crossover | Analysis and Search of Crossover Designs |

crossReg | Confidence intervals for crossover points of two simple regression lines |

crossrun | Joint Distribution of Number of Crossings and Longest Run |

crosstable | Crosstables for Descriptive Analyses |

crosstalk | Inter-Widget Interactivity for HTML Widgets |

CrossVA | Verbal Autopsy Data Transformation for InSilicoVA and InterVA5 Algorithms |

crossval | Generic Functions for Cross Validation |

CrossValidate | Classes and Methods for Cross Validation of "Class Prediction" Algorithms |

crosswalkr | Rename and Encode Data Frames Using External Crosswalk Files |

crossword.r | Generating Crosswords from Word Lists |

crov | Constrained Regression Model for an Ordinal Response and Ordinal Predictors |

CRPClustering | Bayesian Nonparametric Chinese Restaurant Process Clustering with Entropy |

crplyr | A 'dplyr' Interface for Crunch |

crqa | Recurrence Quantification Analysis for Categorical and Continuous Time-Series |

crrp | Penalized Variable Selection in Competing Risks Regression |

crrSC | Competing risks regression for Stratified and Clustered data |

crrstep | Stepwise Covariate Selection for the Fine & Gray Competing Risks Regression Model |

crs | Categorical Regression Splines |

crseEventStudy | A Robust and Powerful Test of Abnormal Stock Returns in Long-Horizon Event Studies |

crsmeta | Extract Coordinate System Metadata |

crsnls | Nonlinear Regression Parameters Estimation by 'CRS4HC' and 'CRS4HCe' |

crso | Cancer Rule Set Optimization ('crso') |

crsra | Tidying and Analyzing 'Coursera' Research Export Data |

crtests | Classification and Regression Tests |

CRTgeeDR | Doubly Robust Inverse Probability Weighted Augmented GEE Estimator |

CRTSize | Sample Size Estimation Functions for Cluster Randomized Trials |

crul | HTTP Client |

crunch | Crunch.io Data Tools |

crunchy | Shiny Apps on Crunch |

cruts | Interface to Climatic Research Unit Time-Series Version 3.21 Data |

CruzPlot | Plot Shipboard DAS Data |

CRWRM | Changing the Reference Group without Re-Running the Model |

CrypticIBDcheck | Identifying Cryptic Relatedness in Genetic Association Studies |

cryst | Calculate the Relative Crystallinity of Starch by XRD and FTIR |

csa | A Cross-Scale Analysis Tool for Model-Observation Visualization and Integration |

csabounds | Bounds on Distributional Treatment Effect Parameters |

csampling | Functions for Conditional Simulation in Regression-Scale Models |

CsChange | Testing for Change in C-Statistic |

csci | Current Status Confidence Intervals |

CSclone | Bayesian Nonparametric Modeling in R |

cSEM | Composite-Based Structural Equation Modeling |

CSeqpat | Frequent Contiguous Sequential Pattern Mining of Text |

CSESA | CRISPR-Based Salmonella Enterica Serotype Analyzer |

CSFA | Connectivity Scores with Factor Analysis |

CSGo | Collecting Counter Strike Global Offensive Data |

cshapes | The CShapes Dataset and Utilities |

CSMES | Cost-Sensitive Multi-Criteria Ensemble Selection for Uncertain Cost Conditions |

csn | Closed Skew-Normal Distribution |

csodata | Download Data from the CSO 'PxStat' API |

cspec | Complete Discrete Fourier Transform (DFT) and Periodogram |

cspp | A Tool for the Correlates of State Policy Project Data |

csppData | Data Only: The Correlates of State Policy Project Dataset |

csrplus | Methods to Test Hypotheses on the Distribution of Spatial Point Processes |

csSAM | csSAM - cell-specific Significance Analysis of Microarrays |

cssTools | Cognitive Social Structure Tools |

cstab | Selection of Number of Clusters via Normalized Clustering Instability |

cstar | Substantive significance testing for regression estimates and marginal effects |

CSTools | Assessing Skill of Climate Forecasts on Seasonal-to-Decadal Timescales |

CSUV | Combined Selection and Uncertainty Visualiser (CSUV) |

csv | Read and Write CSV Files with Selected Conventions |

csvread | Fast Specialized CSV File Loader |

csvy | Import and Export CSV Data with a YAML Metadata Header |

CTAShiny | Interactive Application for Working with Contingency Tables |

CTD | A Method for 'Connecting The Dots' in Weighted Graphs |

ctgdist | Likert Category Distance Calculator |

ctgt | Closed Testing with Globaltest for Pathway Analysis |

cthreshER | Continuous Threshold Expectile Regression |

ctl | Correlated Trait Locus Mapping |

CTM | A Text Mining Toolkit for Chinese Document |

ctmcd | Estimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data |

ctmcmove | Modeling Animal Movement with Continuous-Time Discrete-Space Markov Chains |

ctmle | Collaborative Targeted Maximum Likelihood Estimation |

ctmm | Continuous-Time Movement Modeling |

CTP | Closed Testing Procedure (CTP) |

ctqr | Censored and Truncated Quantile Regression |

ctrdata | Retrieve and Analyze Clinical Trials in Public Registers |

ctrlGene | Assess the Stability of Candidate Housekeeping Genes |

ctsem | Continuous Time Structural Equation Modelling |

ctsemOMX | Continuous Time SEM - 'OpenMx' Based Functions |

CTShiny | Interactive Document for Working with Classification Tree Analysis |

CTShiny2 | Interactive Document for Working with Classification Tree Analysis |

CTT | Classical Test Theory Functions |

CTTinShiny | Shiny Interface for the CTT Package |

CTTShiny | Classical Test Theory via Shiny |

ctv | CRAN Task Views |

CUB | A Class of Mixture Models for Ordinal Data |

cubature | Adaptive Multivariate Integration over Hypercubes |

cubelyr | A Data Cube 'dplyr' Backend |

cubeview | View 3D Raster Cubes Interactively |

cubfits | Codon Usage Bias Fits |

cubing | Rubik's Cube Solving |

Cubist | Rule- And Instance-Based Regression Modeling |

CUFF | Charles's Utility Function using Formula |

cultevo | Tools, Measures and Statistical Tests for Cultural Evolution |

CUMP | Analyze Multivariate Phenotypes by Combining Univariate Results |

cumplyr | Extends ddply to allow calculation of cumulative quantities |

cumSeg | Change Point Detection in Genomic Sequences |

cumstats | Cumulative Descriptive Statistics |

cumulocityr | Client for the 'Cumulocity' API |

cuperdec | Cumulative Percent Decay Curve Generator |

cuRe | Parametric Cure Model Estimation |

curephEM | NPMLE for Logistic-Cox Cure-Rate Model |

curl | A Modern and Flexible Web Client for R |

currentSurvival | Estimation of CCI and CLFS Functions |

curry | Partial Function Application with %<%, %-<%, and %><% |

cursr | Cursor and Terminal Manipulation |

curstatCI | Confidence Intervals for the Current Status Model |

curvecomp | Multiple Curve Comparisons Using Parametric Bootstrap |

curveDepth | Tukey Curve Depth and Distance in the Space of Curves |

curvHDR | Filtering of Flow Cytometry Samples |

cusp | Cusp-Catastrophe Model Fitting Using Maximum Likelihood |

CustomerScoringMetrics | Evaluation Metrics for Customer Scoring Models Depending on Binary Classifiers |

customizedTraining | Customized Training for Lasso and Elastic-Net Regularized Generalized Linear Models |

customsteps | Customizable Higher-Order Recipe Step Functions |

CustosAscensor | Costs Allocation for the Installation of an Elevator |

cusum | Cumulative Sum (CUSUM) Charts for Monitoring of Hospital Performance |

CUSUMdesign | Compute Decision Interval and Average Run Length for CUSUM Charts |

cutoff | Seek the Significant Cutoff Value |

cutoffR | CUTOFF: A Spatio-temporal Imputation Method |

cutpointr | Determine and Evaluate Optimal Cutpoints in Binary Classification Tasks |

CutpointsOEHR | Optimal Equal-HR Method to Find Two Cutpoints for U-Shaped Relationships in Cox Model |

cuttlefish.model | An R package to perform LPUE standardization and stock assessment of the English Channel cuttlefish stock using a two-stage biomass model |

cvar | Compute Expected Shortfall and Value at Risk for Continuous Distributions |

CVarE | Conditional Variance Estimator for Sufficient Dimension Reduction |

cvAUC | Cross-Validated Area Under the ROC Curve Confidence Intervals |

CVcalibration | Estimation of the Calibration Equation with Error-in Observations |

cvCovEst | Cross-Validated Covariance Matrix Estimation |

cvcqv | Coefficient of Variation (CV) with Confidence Intervals (CI) |

cvcrand | Efficient Design and Analysis of Cluster Randomized Trials |

CVD | Color Vision Deficiencies |

CVEK | Cross-Validated Kernel Ensemble |

cvequality | Tests for the Equality of Coefficients of Variation from Multiple Groups |

cvGEE | Cross-Validated Predictions from GEE |

CVglasso | Lasso Penalized Precision Matrix Estimation |

cvmdisc | Cramer von Mises Tests for Discrete or Grouped Distributions |

cvmgof | Cramer-von Mises Goodness-of-Fit Tests |

cvms | Cross-Validation for Model Selection |

cvq2 | Calculate the predictive squared correlation coefficient |

CVR | Canonical Variate Regression |

CVrisk | Compute Risk Scores for Cardiovascular Diseases |

CVST | Fast Cross-Validation via Sequential Testing |

CVThresh | Level-Dependent Cross-Validation Thresholding |

cvTools | Cross-validation tools for regression models |

CVTuningCov | Regularized Estimators of Covariance Matrices with CV Tuning |

CVXR | Disciplined Convex Optimization |

cwbtools | Tools to Create, Modify and Manage 'CWB' Corpora |

cwhmisc | Miscellaneous Functions for Math, Plotting, Printing, Statistics, Strings, and Tools |

cwm | Cluster Weighted Models by EM algorithm |

cxhull | Convex Hull |

cxr | A Toolbox for Modelling Species Coexistence in R |

cxxfunplus | extend cxxfunction by saving the dynamic shared objects |

cycleRtools | Tools for Cycling Data Analysis |

cyclestreets | Cycle Routing and Data for Cycling Advocacy |

cyclocomp | Cyclomatic Complexity of R Code |

cycloids | cycloids |

cyclomort | Survival Modeling with a Periodic Hazard Function |

Cyclops | Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis |

cymruservices | Query 'Team Cymru' 'IP' Address, Autonomous System Number ('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware' Hash Data Services |

cyphid | Cycle and Phase Identification for mastication data |

cyphr | High Level Encryption Wrappers |

cystiSim | Agent-Based Model for Taenia_solium Transmission and Control |

CytobankAPI | Cytobank API Wrapper for R |

CytobankAPIstats | Computes Signaling and Population Stats for Cytometry Data on Cytobank using 'CytobankAPI' |

CytobankBridgeR | Bridging and Extending the CytobankAPI Package in R to the Cytobank Web Application |

cytoDiv | Cytometric diversity indices |

cytofan | Plot Fan Plots for Cytometry Data using 'ggplot2' |

cytometree | Automated Cytometry Gating and Annotation |

cytominer | Methods for Image-Based Cell Profiling |

czechrates | Czech Interest Rates |

czso | Use Open Data from the Czech Statistical Office in R |

D3GB | Interactive Genome Browser with R |

d3Network | Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R |

D3partitionR | Interactive Charts of Nested and Hierarchical Data with 'D3.js' |

d3plus | Seamless 'D3Plus' Integration |

d3r | 'd3.js' Utilities for R |

d3Tree | Create Interactive Collapsible Trees with the JavaScript 'D3' Library |

DAAG | Data Analysis and Graphics Data and Functions |

DAAGbio | Data Sets and Functions, for Demonstrations with Expression Arrays and Gene Sequences |

daarem | Damped Anderson Acceleration with Epsilon Monotonicity for Accelerating EM-Like Monotone Algorithms |

dabestr | Data Analysis using Bootstrap-Coupled Estimation |

dabr | Database Management with R |

DACF | Data Analysis with Ceiling and/or Floor Data |

dad | Three-Way / Multigroup Data Analysis Through Densities |

dadjoke | Displays a Dad Joke |

dadjokeapi | Return a Random Dad Joke |

dae | Functions Useful in the Design and ANOVA of Experiments |

daewr | Design and Analysis of Experiments with R |

daff | Diff, Patch and Merge for Data.frames |

dafs | Data analysis for forensic scientists |

dagitty | Graphical Analysis of Structural Causal Models |

dagR | R functions for directed acyclic graphs |

DAIME | Effects of Changing Deposition Rates |

DAISIE | Dynamical Assembly of Islands by Speciation, Immigration and Extinction |

DAKS | Data Analysis and Knowledge Spaces |

DALEX | moDel Agnostic Language for Exploration and eXplanation |

DALEXtra | Extension for 'DALEX' Package |

DALY | The DALY Calculator - Graphical User Interface for Probabilistic DALY Calculation in R |

dam | Data Analysis Metabolomics |

DamiaNN | Neural Network Numerai |

DAMisc | Dave Armstrong's Miscellaneous Functions |

DAMOCLES | Dynamic Assembly Model of Colonization, Local Extinction and Speciation |

dampack | Decision-Analytic Modeling Package |

damr | Interface to Drosophila Activity Monitor System Result Files |

dams | Dams in the United States from the National Inventory of Dams (NID) |

DandEFA | Dandelion Plot for R-Mode Exploratory Factor Analysis |

dang | 'Dang' Associated New Goodies |

dani | Design and Analysis of Non-Inferiority Trials |

dann | Discriminant Adaptive Nearest Neighbor Classification |

danstat | R Client for the Statistics Denmark Databank API |

DAP | Discriminant Analysis via Projections |

dapr | 'purrr'-Like Apply Functions Over Input Elements |

daqapo | Data Quality Assessment for Process-Oriented Data |

Dark | The Analysis of Dark Adaptation Data |

DarkDiv | Estimating Dark Diversity and Site-Specific Species Pools |

darksky | Tools to Work with the 'Dark Sky' 'API' |

dartR | Importing and Analysing SNP and Silicodart Data Generated by Genome-Wide Restriction Fragment Analysis |

darts | Statistical Tools to Analyze Your Darts Game |

dash | An Interface to the 'dash' Ecosystem for Authoring Reactive Web Applications |

dashboard | Interactive Data Visualization with D3.js |

dashboardthemes | Customise the Appearance of 'shinydashboard' Applications using Themes |

dashCoreComponents | Core Interactive UI Components for 'Dash' |

dashHtmlComponents | Vanilla HTML Components for 'Dash' |

dashPivottable | Interactive React-Based Pivot Tables for Dash |

dashTable | Core Interactive Table Component for 'dash' |

Dasst | Tools for Reading, Processing and Writing 'DSSAT' Files |

dat | Tools for Data Manipulation |

data.table | Extension of 'data.frame' |

data.tree | General Purpose Hierarchical Data Structure |

data.validator | Automatic Data Validation and Reporting |

Data2LD | Functional Data Analysis with Linear Differential Equations |

data360r | Wrapper for 'TCdata360' and 'Govdata360' API |

DatabaseConnector | Connecting to Various Database Platforms |

DatabaseConnectorJars | JAR Dependencies for the 'DatabaseConnector' Package |

DatabionicSwarm | Swarm Intelligence for Self-Organized Clustering |

DataClean | Data Cleaning |

datacleanr | Interactive and Reproducible Data Cleaning |

DataCombine | Tools for Easily Combining and Cleaning Data Sets |

dataCompareR | Compare Two Data Frames and Summarise the Difference |

datadigest | Create an Interactive Data Summary |

datadogr | R Client for 'Datadog' API |

DataEditR | An Interactive Editor for Viewing, Entering, Filtering & Editing Data |

DataEntry | Make it Easier to Enter Questionnaire Data |

DataExplorer | Automate Data Exploration and Treatment |

dataframeexplorer | Familiarity with Dataframes Before Data Manipulation |

dataframes2xls | Write Data Frames to Xls Files |

datafsm | Estimating Finite State Machine Models from Data |

datagovindia | Data.gov.in API Wrapper |

DataGraph | Export Data from R so 'DataGraph' can Read it |

DataLoader | Import Multiple File Types |

dataMaid | A Suite of Checks for Identification of Potential Errors in a Data Frame as Part of the Data Screening Process |

datamap | A system for mapping foreign objects to R variables and environments |

datamart | Unified access to your data sources |

dataMeta | Create and Append a Data Dictionary for an R Dataset |

datamods | Modules to Import and Manipulate Data in 'Shiny' |

datanugget | Create, Refine, and Cluster Data Nuggets |

dataonderivatives | Easily Source Publicly Available Data on Derivatives |

dataone | R Interface to the DataONE REST API |

datapack | A Flexible Container to Transport and Manipulate Data and Associated Resources |

datapackage.r | Data Package 'Frictionless Data' |

DataPackageR | Construct Reproducible Analytic Data Sets as R Packages |

datapasta | R Tools for Data Copy-Pasta |

dataprep | Efficient and Flexible Data Preprocessing Tools |

dataPreparation | Automated Data Preparation |

dataQualityR | Performs variable level data quality checks and generates summary statistics |

dataquieR | Data Quality in Epidemiological Research |

dataReporter | Reproducible Data Screening Checks and Report of Possible Errors |

dataresqc | C3S Quality Control Tools for Historical Climate Data |

dataRetrieval | Retrieval Functions for USGS and EPA Hydrologic and Water Quality Data |

datarium | Data Bank for Statistical Analysis and Visualization |

datarobot | 'DataRobot' Predictive Modeling API |

datasailr | Row by Row Data Processing Tool, Using 'DataSailr' Script |

datasauRus | Datasets from the Datasaurus Dozen |

dataseries | Switzerland's Data Series in One Place |

datasets.load | Interfaces for Loading Datasets |

datasetsICR | Datasets from the Book "An Introduction to Clustering with R" |

DataSpaceR | Interface to 'the CAVD DataSpace' |

dataspice | Create Lightweight Schema.org Descriptions of Data |

DatAssim | Data Assimilation |

datastepr | An Implementation of a SAS-Style Data Step |

DatastreamDSWS2R | Provides a Link Between the 'Refinitiv Datastream' System and R |

datastructures | Implementation of Core Data Structures |

dataverse | Client for Dataverse 4+ Repositories |

DataVisualizations | Visualizations of High-Dimensional Data |

DataViz | Data Visualisation Using an HTML Page and 'D3.js' |

date | Functions for Handling Dates |

daterangepicker | Create a Shiny Date-Range Input |

datetime | Nominal Dates, Times, and Durations |

datetimeutils | Utilities for Dates and Times |

datoramar | Interface to the 'Datorama' API |

datos | Traduce al Español Varios Conjuntos de Datos de Práctica |

datplot | Preparation of Object Dating Ranges for Density Plots (Aoristic Analysis) |

datr | 'Dat' Protocol Interface |

datrProfile | Column Profile for Tables and Datasets |

dave | Functions for "Data Analysis in Vegetation Ecology" |

Davies | The Davies Quantile Function |

dawai | Discriminant Analysis with Additional Information |

daymetr | Interface to the 'Daymet' Web Services |

dbarts | Discrete Bayesian Additive Regression Trees Sampler |

dbEmpLikeGOF | Goodness-of-fit and two sample comparison tests using sample entropy |

dbEmpLikeNorm | Test for joint assessment of normality |

DBEST | Detecting Breakpoints and Estimating Segments in Trend |

DBfit | A Double Bootstrap Method for Analyzing Linear Models with Autoregressive Errors |

dbflobr | Read and Write Files to SQLite Databases |

DBGSA | methods of distance-based gene set functional enrichment analysis |

dbhydroR | 'DBHYDRO' Hydrologic and Water Quality Data |

DBI | R Database Interface |

DBItest | Testing 'DBI' 'Backends' |

dblcens | Compute the NPMLE of distribution from doubly censored data |

dBlockmodeling | Deterministic Blockmodeling of Signed, One-Mode and Two-Mode Networks |

dblr | Discrete Boosting Logistic Regression |

dbmss | Distance-Based Measures of Spatial Structures |

dbnlearn | Dynamic Bayesian Network Structure Learning, Parameter Learning and Forecasting |

dbnR | Dynamic Bayesian Network Learning and Inference |

dbparser | 'DrugBank' Database XML Parser |

dbplot | Simplifies Plotting Data Inside Databases |

dbplyr | A 'dplyr' Back End for Databases |

dbscan | Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms |

dbstats | Distance-Based Statistics |

dbWebForms | Produce R Functions to Create HTML Forms Based on SQL Meta Data |

dbx | A Fast, Easy-to-Use Database Interface |

dc3net | Inferring Condition-Specific Networks via Differential Network Inference |

DCA | Dynamic Correlation Analysis for High Dimensional Data |

DCCA | Detrended Fluctuation and Detrended Cross-Correlation Analysis |

DCchoice | Analyzing Dichotomous Choice Contingent Valuation Data |

dccmidas | DCC Models with GARCH-MIDAS Specifications in the Univariate Step |

dccvalidator | Metadata Validation for Data Coordinating Centers |

DCD | Differential Community Detection in Paired Biological Networks |

DCEM | Clustering Big Data using Expectation Maximization Star (EM*) Algorithm |

DCG | Data Cloud Geometry (DCG): Using Random Walks to Find Community Structure in Social Network Analysis |

DCGL | Differential Co-expression Analysis and Differential Regulation Analysis of Gene Expression Microarray Data |

dcGOR | Analysis of Ontologies and Protein Domain Annotations |

DChaos | Chaotic Time Series Analysis |

dChipIO | Methods for Reading dChip Files |

DCL | Claims Reserving under the Double Chain Ladder Model |

dclone | Data Cloning and MCMC Tools for Maximum Likelihood Methods |

dclust | Divisive Hierarchical Clustering |

DCluster | Functions for the Detection of Spatial Clusters of Diseases |

DClusterm | Model-Based Detection of Disease Clusters |

dcminfo | Information Matrix for Diagnostic Classification Models |

dcmle | Hierarchical Models Made Easy with Data Cloning |

dcmodify | Modify Data Using Externally Defined Modification Rules |

DCODE | List Linear n-Peptide Constraints for Overlapping Protein Regions |

dcov | A Fast Implementation of Distance Covariance |

dCovTS | Distance Covariance and Correlation for Time Series Analysis |

DCPO | Dynamic Comparative Public Opinion |

dCUR | Dimension Reduction with Dynamic CUR |

dcurver | Utility Functions for Davidian Curves |

dcv | Conventional Cross-validation statistics for climate-growth model |

ddalpha | Depth-Based Classification and Calculation of Data Depth |

DDD | Diversity-Dependent Diversification |

dde | Solve Delay Differential Equations |

DDHFm | Variance Stabilization by Data-Driven Haar-Fisz (for Microarrays) |

ddi | The Data Defect Index for Samples that May not be IID |

ddiv | Data Driven I-v Feature Extraction |

DDIwR | DDI with R |

DDM | Death Registration Coverage Estimation |

DDoutlier | Distance & Density-Based Outlier Detection |

ddp | Desirable Dietary Pattern |

ddpca | Diagonally Dominant Principal Component Analysis |

ddpcr | Analysis and Visualization of Droplet Digital PCR in R and on the Web |

DDPNA | Disease-Drived Differential Proteins Co-Expression Network Analysis |

DDRTree | Learning Principal Graphs with DDRTree |

ddst | Data Driven Smooth Tests |

deadband | Statistical Deadband Algorithms Comparison |

deal | Learning Bayesian Networks with Mixed Variables |

deamer | Deconvolution density estimation with adaptive methods for a variable prone to measurement error |

deaR | Conventional and Fuzzy Data Envelopment Analysis |

debar | A Post-Clustering Denoiser for COI-5P Barcode Data |

deBInfer | Bayesian Inference for Differential Equations |

debugme | Debug R Packages |

debugr | Debug Tool to Watch Objects/Expressions While Running an R Script |

DeCAFS | Detecting Changes in Autocorrelated and Fluctuating Signals |

DECIDE | DEComposition of Indirect and Direct Effects |

decido | Bindings for 'Mapbox' Ear Cutting Triangulation Library |

decision | Statistical Decision Analysis |

decisionSupport | Quantitative Support of Decision Making under Uncertainty |

deckgl | An R Interface to 'deck.gl' |

DeclareDesign | Declare and Diagnose Research Designs |

decode | Differential Co-Expression and Differential Expression Analysis |

decoder | Decode Coded Variables to Plain Text and the Other Way Around |

decomposedPSF | Time Series Prediction with PSF and Decomposition Methods (EMD and EEMD) |

DecomposeR | Empirical Mode Decomposition for Cyclostratigraphy |

decompr | Global-Value-Chain Decomposition |

decon | Deconvolution Estimation in Measurement Error Models |

deconstructSigs | Identifies Signatures Present in a Tumor Sample |

deconvolveR | Empirical Bayes Estimation Strategies |

decor | Retrieve Code Decorations |

DecorateR | Fit and Deploy DECORATE Trees |

decorators | Extend the Behaviour of a Function without Explicitly Modifying it |

Deducer | A Data Analysis GUI for R |

DeducerPlugInExample | Deducer Plug-in Example |

DeducerPlugInScaling | Reliability and factor analysis plugin |

DeducerSpatial | Deducer for spatial data analysis |

DeducerSurvival | Add Survival Dialogue to Deducer |

DeducerText | Deducer GUI for Text Data |

deducorrect | Deductive Correction, Deductive Imputation, and Deterministic Correction |

deductive | Data Correction and Imputation Using Deductive Methods |

deep | A Neural Networks Framework |

deepboost | Deep Boosting Ensemble Modeling |

deepdive | Deep Learning for General Purpose |

deepgmm | Deep Gaussian Mixture Models |

deepgp | Sequential Design for Deep Gaussian Processes using MCMC |

deepMOU | Clustering of Short Texts by Mixture of Unigrams and Its Deep Extensions |

deepnet | deep learning toolkit in R |

deepNN | Deep Learning |

DEEPR | Dirichlet-multinomial Evolutionary Event Profile Randomization (DEEPR) test |

deepredeff | Deep Learning Prediction of Effectors |

DEEVD | Density Estimation by Extreme Value Distributions |

default | Change the Default Arguments in R Functions |

define | Create FDA-Style Data and Program Definitions |

deflateBR | Deflate Nominal Brazilian Reais |

deformula | Integration of One-Dimensional Functions with Double Exponential Formulas |

deGradInfer | Parameter Inference for Systems of Differential Equation |

degreenet | Models for Skewed Count Distributions Relevant to Networks |

deisotoper | Detection of Isotope Pattern of a Mass Spectrometric Measurement |

dejaVu | Multiple Imputation for Recurrent Events |

Delaporte | Statistical Functions for the Delaporte Distribution |

delayed | A Framework for Parallelizing Dependent Tasks |

DelayedEffect.Design | Sample Size and Power Calculations using the APPLE and SEPPLE Methods |

deldir | Delaunay Triangulation and Dirichlet (Voronoi) Tessellation |

DeLorean | Estimates Pseudotimes for Single Cell Expression Data |

delt | Estimation of Multivariate Densities Using Adaptive Partitions |

Delta | Measure of Agreement Between Two Raters |

deltaPlotR | Identification of Dichotomous Differential Item Functioning (DIF) using Angoff's Delta Plot Method |

deltar | Calculation of Delta R Values |

DELTD | Kernel Density Estimation using Lifetime Distributions |

dematel | Decision Making Trial and Evaluation Laboratory Technique in R |

Demerelate | Functions to Calculate Relatedness on Diploid Genetic Data |

deming | Deming, Theil-Sen, Passing-Bablock and Total Least Squares Regression |

DemoDecomp | Decompose Demographic Functions |

demogR | Analysis of Age-Structured Demographic Models |

DemografixeR | Extrapolate Gender, Age and Nationality of a Name |

demoGraphic | Providing Demographic Table with the P-Value, Standardized Mean Difference Value |

demography | Forecasting Mortality, Fertility, Migration and Population Data |

demoKde | Kernel Density Estimation for Demonstration Purposes |

demoShiny | Runs a 'Shiny' App as Demo or Lists All Demo 'Shiny' Apps |

DEMOVA | DEvelopment (of Multi-Linear QSPR/QSAR) MOdels VAlidated using Test Set |

demu | Optimal Design Emulators via Point Processes |

dendextend | Extending 'dendrogram' Functionality in R |

dendRoAnalyst | A Tool for Processing and Analyzing Dendrometer Data |

dendroextras | Extra Functions to Cut, Label and Colour Dendrogram Clusters |

dendrometeR | Analyzing Dendrometer Data |

DendroSync | A Set of Tools for Calculating Spatial Synchrony Between Tree-Ring Chronologies |

dendroTools | Linear and Nonlinear Methods for Analyzing Daily and Monthly Dendroclimatological Data |

DendSer | Dendrogram seriation: ordering for visualisation |

dendsort | Modular Leaf Ordering Methods for Dendrogram Nodes |

DengueRT | Parameter Estimates and Real-Time Prediction of a Single Dengue Outbreak |

denoiSeq | Differential Expression Analysis Using a Bottom-Up Model |

denoiseR | Regularized Low Rank Matrix Estimation |

denovolyzeR | Statistical Analyses of De Novo Genetic Variants |

denpro | Visualization of Multivariate Functions, Sets, and Data |

denseFLMM | Functional Linear Mixed Models for Densely Sampled Data |

densEstBayes | Density Estimation via Bayesian Inference Engines |

densitr | Analysing Density Profiles from Resistance Drilling of Trees |

Density.T.HoldOut | Density.T.HoldOut: Non-combinatorial T-estimation Hold-Out for density estimation |

densityClust | Clustering by Fast Search and Find of Density Peaks |

DensParcorr | Dens-Based Method for Partial Correlation Estimation in Large Scale Brain Networks |

densratio | Density Ratio Estimation |

denstrip | Density Strips and Other Methods for Compactly Illustrating Distributions |

denvax | Simple Dengue Test and Vaccinate Cost Thresholds |

DEoptim | Global Optimization by Differential Evolution |

DEoptimR | Differential Evolution Optimization in Pure R |

depcoeff | Dependency Coefficients |

depend.truncation | Statistical Methods for the Analysis of Dependently Truncated Data |

depigner | A Utility Package to Help you Deal with "Pignas" |

DepLogo | Dependency Logo |

DEploid | Deconvolute Mixed Genomes with Unknown Proportions |

depmix | Dependent Mixture Models |

depmixS4 | Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4 |

DEPONS2R | Read, Plot and Analyse Output from the DEPONS Model |

depth | Nonparametric Depth Functions for Multivariate Analysis |

depth.plot | Multivariate Analogy of Quantiles |

DepthProc | Statistical Depth Functions for Multivariate Analysis |

depthTools | Depth Tools Package |

dequer | Stacks, Queues, and 'Deques' for R |

DeRezende.Ferreira | Zero Coupon Yield Curve Modelling |

Deriv | Symbolic Differentiation |

derivmkts | Functions and R Code to Accompany Derivatives Markets |

DES | Discrete Event Simulation |

desc | Manipulate DESCRIPTION Files |

descomponer | Seasonal Adjustment by Frequency Analysis |

descr | Descriptive Statistics |

describedata | Miscellaneous Descriptive Functions |

DescribeDisplay | An Interface to the 'DescribeDisplay' 'GGobi' Plugin |

describer | Describe Data in R Using Common Descriptive Statistics |

DescriptiveStats.OBeu | Descriptive Statistics 'OpenBudgets.eu' |

DescriptiveWH | Descriptive Statistics |

descriptr | Generate Descriptive Statistics |

DescrTab2 | Publication Quality Descriptive Statistics Tables |

descstat | Tools for Descriptive Statistics |

descstatsr | Descriptive Univariate Statistics |

desctable | Produce Descriptive and Comparative Tables Easily |

DescTools | Tools for Descriptive Statistics |

DescToolsAddIns | Interactive Functions to be Used as Shortcuts in 'RStudio' |

deseasonalize | Optimal deseasonalization for geophysical time series using AR fitting |

DesignCTPB | Design Clinical Trials with Potential Biomarker Effect |

designGG | Computational tool for designing genetical genomics experiments |

DesignLibrary | Library of Research Designs |

designmatch | Matched Samples that are Balanced and Representative by Design |

designr | Balanced Factorial Designs |

desiR | Desirability Functions for Ranking, Selecting, and Integrating Data |

desirability | Function Optimization and Ranking via Desirability Functions |

desire | Desirability functions in R |

DESnowball | Bagging with Distance-based Regression for Differential Gene Expression Analyses |

deSolve | Solvers for Initial Value Problems of Differential Equations ('ODE', 'DAE', 'DDE') |

desplot | Plotting Field Plans for Agricultural Experiments |

DET | Representation of DET Curve with Confidence Intervals |

details | Create Details HTML Tag for Markdown and Package Documentation |

detect | Analyzing Wildlife Data with Detection Error |

detector | Detect Data Containing Personally Identifiable Information |

detectR | Change Point Detection |

detectRUNS | Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes |

detectseparation | Detect and Check for Separation and Infinite Maximum Likelihood Estimates |

deTestSet | Test Set for Differential Equations |

DetLifeInsurance | Life Insurance Premium and Reserves Valuation |

DetMCD | Implementation of the DetMCD Algorithm (Robust and Deterministic Estimation of Location and Scatter) |

detpack | Density Estimation and Random Number Generation with Distribution Element Trees |

DetR | Suite of Deterministic and Robust Algorithms for Linear Regression |

detrendeR | Start the detrendeR Graphical User Interface (GUI) |

detrendr | Detrend Images |

deTS | Tissue-Specific Enrichment Analysis |

DetSel | A Computer Program to Detect Markers Responding to Selection |

detzrcr | Compare Detrital Zircon Suites |

devEMF | EMF Graphics Output Device |

devFunc | Clear and Condense Argument Check for User-Defined Functions |

devoid | A Graphic Device that Does Nothing |

Devore7 | Data sets from Devore's "Prob and Stat for Eng (7th ed)" |

devRate | Quantify the Relationship Between Development Rate and Temperature in Ectotherms |

devtools | Tools to Make Developing R Packages Easier |

DevTreatRules | Develop Treatment Rules with Observational Data |

dexter | Data Management and Analysis of Tests |

dextergui | A Graphical User Interface for Dexter |

dexterMST | CML and Bayesian Calibration of Multistage Tests |

DFA | Detrended Fluctuation Analysis |

DFA.CANCOR | Linear Discriminant Function and Canonical Correlation Analysis |

dfadjust | Degrees of Freedom Adjustment for Robust Standard Errors |

dfcomb | Phase I/II Adaptive Dose-Finding Design for Combination Studies |

dfCompare | Compare Two Dataframes and Return Adds, Changes, and Deletes |

dfConn | Dynamic Functional Connectivity Analysis |

dfcrm | Dose-Finding by the Continual Reassessment Method |

dfexplore | Explore data.frames by plotting NA and classes of each variable |

dfidx | Indexed Data Frames |

DFIT | Differential Functioning of Items and Tests |

dfmeta | Meta-Analysis of Phase I Dose-Finding Early Clinical Trials |

dfmta | Phase I/II Adaptive Dose-Finding Design for MTA |

dfoliatR | Detection and Analysis of Insect Defoliation Signals in Tree Rings |

dfoptim | Derivative-Free Optimization |

Dforest | Decision Forest |

dformula | Data Manipulation using Formula |

dfped | Extrapolation and Bridging of Adult Information in Early Phase Dose-Finding Paediatrics Studies |

dfphase1 | Phase I Control Charts (with Emphasis on Distribution-Free Methods) |

dfpk | Bayesian Dose-Finding Designs using Pharmacokinetics (PK) for Phase I Clinical Trials |

dfrr | Dichotomized Functional Response Regression |

dfvad | Diewert and Fox's Method of Value Added Growth Decomposition |

dga | Capture-Recapture Estimation using Bayesian Model Averaging |

dGAselID | Genetic Algorithm with Incomplete Dominance for Feature Selection |

DGCA | Differential Gene Correlation Analysis |

DGEobj | Differential Gene Expression (DGE) Analysis Results Data Object |

dglars | Differential Geometric Least Angle Regression |

dglm | Double Generalized Linear Models |

DGLMExtPois | Double Generalized Linear Models Extending Poisson Regression |

dgof | Discrete Goodness-of-Fit Tests |

dgumbel | The Gumbel Distribution Functions and Gradients |

DGVM3D | 3D Forest Simulation Visualization Tool |

DHARMa | Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models |

DHBins | Hexmaps for NZ District Health Boards |

dhga | Differential Hub Gene Analysis |

dhglm | Double Hierarchical Generalized Linear Models |

dhh | A Heavy-Headed Distribution |

dhReg | Dynamic Harmonic Regression |

DHS.rates | Calculates Demographic Indicators |

dHSIC | Independence Testing via Hilbert Schmidt Independence Criterion |

di | Deficit Index (DI) |

diagis | Diagnostic Plot and Multivariate Summary Statistics of Weighted Samples from Importance Sampling |

diagmeta | Meta-Analysis of Diagnostic Accuracy Studies with Several Cutpoints |

diagonals | Block Diagonal Extraction or Replacement |

diagram | Functions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams |

DiagrammeR | Graph/Network Visualization |

DiagrammeRsvg | Export DiagrammeR Graphviz Graphs as SVG |

DiallelAnalysisR | Diallel Analysis with R |

dialr | Parse, Format, and Validate International Phone Numbers |

dialrjars | Required 'libphonenumber' jars for the 'dialr' Package |

dials | Tools for Creating Tuning Parameter Values |

diaplt | Beads Summary Plot of Ranges |

diathor | Calculate Ecological Information and Diatom Based Indices |

dice | Calculate probabilities of various dice-rolling events |

DiceDesign | Designs of Computer Experiments |

DiceEval | Construction and Evaluation of Metamodels |

DiceKriging | Kriging Methods for Computer Experiments |

DiceOptim | Kriging-Based Optimization for Computer Experiments |

diceR | Diverse Cluster Ensemble in R |

DiceView | Methods for Visualization of Computer Experiments Design and Surrogate |

dichromat | Color Schemes for Dichromats |

dicionariosIBGE | Dictionaries for reading microdata surveys from IBGE |

DICOMread | Reading and Saving DICOM Image Files |

DIconvex | Finding Patterns of Monotonicity and Convexity in Data |

Dict | R6 Based Key-Value Dictionary Implementation |

did | Treatment Effects with Multiple Periods and Groups |

DidacticBoost | A Simple Implementation and Demonstration of Gradient Boosting |

Diderot | Bibliographic Network Analysis |

DIDmultiplegt | Estimation in DID with Multiple Groups and Periods |

didrooRFM | Compute Recency Frequency Monetary Scores for your Customer Data |

dief | Metrics for Continuous Efficiency |

dielectric | Defines some physical constants and dielectric functions commonly used in optics, plasmonics |

dietr | Diet Estimated Trophic Levels |

diezeit | R Interface to the ZEIT ONLINE Content API |

DIFboost | Detection of Differential Item Functioning (DIF) in Rasch Models by Boosting Techniques |

difconet | Differential Coexpressed Networks |

diffcor | Fisher's z-Tests Concerning Difference of Correlations |

DiffCorr | Analyzing and Visualizing Differential Correlation Networks in Biological Data |

diffdepprop | Calculates Confidence Intervals for two Dependent Proportions |

diffdf | Dataframe Difference Tool |

diffee | Fast and Scalable Learning of Sparse Changes in High-Dimensional Gaussian Graphical Model Structure |

diffEnrich | Given a List of Gene Symbols, Performs Differential Enrichment Analysis |

diffeqr | Solving Differential Equations (ODEs, SDEs, DDEs, DAEs) |

diffeR | Metrics of Difference for Comparing Pairs of Maps or Pairs of Variables |

diffIRT | Diffusion IRT Models for Response and Response Time Data |

diffman | Detect Differentiation Problems |

diffmatchpatch | String Diff, Match, and Patch Utilities |

diffMeshGP | Multi-Fidelity Computer Experiments Using the Tuo-Wu-Yu Model |

DiffNet | Detection of Statistically Significant Changes in Complex Biological Networks |

diffobj | Diffs for R Objects |

diffpriv | Easy Differential Privacy |

diffr | Display Differences Between Two Files using Codediff Library |

diffusion | Forecast the Diffusion of New Products |

diffusionMap | Diffusion Map |

DiffusionRgqd | Inference and Analysis for Generalized Quadratic Diffusions |

DiffusionRimp | Inference and Analysis for Diffusion Processes via Data Imputation and Method of Lines |

DiffusionRjgqd | Inference and Analysis for Jump Generalized Quadratic Diffusions |

diffusr | Network Diffusion Algorithms |

diffviewer | HTML Widget to Show File Differences |

DiffXTables | Pattern Analysis Across Contingency Tables |

DIFlasso | A Penalty Approach to Differential Item Functioning in Rasch Models |

difNLR | DIF and DDF Detection by Non-Linear Regression Models |

DIFplus | Multilevel Mantel-Haenszel Statistics for Differential Item Functioning Detection |

difR | Collection of Methods to Detect Dichotomous Differential Item Functioning (DIF) |

DIFshiny | Differential Item Functioning via Shiny Application |

DIFtree | Item Focussed Trees for the Identification of Items in Differential Item Functioning |

digest | Create Compact Hash Digests of R Objects |

digitalPCR | Estimate Copy Number for Digital PCR |

digitize | Use Data from Published Plots in R |

dils | Data-Informed Link Strength. Combine multiple-relationship networks into a single weighted network. Impute (fill-in) missing network links |

DIME | DIME (Differential Identification using Mixture Ensemble) |

dimensionsR | Gathering Bibliographic Records from 'Digital Science Dimensions' Using 'DSL' API |

DImodels | Diversity-Interactions (DI) Models |

DIMORA | Diffusion Models R Analysis |

dimRed | A Framework for Dimensionality Reduction |

dina | Bayesian Estimation of DINA Model |

dinamic | DiNAMIC A Method To Analyze Recurrent DNA Copy Number Aberrations in Tumors |

dineq | Decomposition of (Income) Inequality |

dint | A Toolkit for Year-Quarter, Year-Month and Year-Isoweek Dates |

DiPALM | Differential Pattern Analysis via Linear Modeling |

DiPhiSeq | Robust Tests for Differential Dispersion and Differential Expression in RNA-Sequencing Data |

dipm | Depth Importance in Precision Medicine (DIPM) Method |

diproperm | Conduct Direction-Projection-Permutation Tests and Display Plots |

DiPs | Directional Penalties for Optimal Matching in Observational Studies |

dipsaus | A Dipping Sauce for Data Analysis and Visualizations |

diptest | Hartigan's Dip Test Statistic for Unimodality - Corrected |

dipw | Debiased Inverse Propensity Score Weighting |

Dire | Linear Regressions with a Latent Outcome Variable |

DIRECT | Bayesian Clustering of Multivariate Data Under the Dirichlet-Process Prior |

DirectedClustering | Directed Weighted Clustering Coefficient |

DirectEffects | Estimating Controlled Direct Effects for Explaining Causal Findings |

Directional | A Collection of R Functions for Directional Data Analysis |

directlabels | Direct Labels for Multicolor Plots |

directotree | Creates an Interactive Tree Structure of a Directory |

directPA | Direction Analysis for Pathways and Kinases |

DirectStandardisation | Adjusted Means and Proportions by Direct Standardisation |

dirichletprocess | Build Dirichlet Process Objects for Bayesian Modelling |

DirichletReg | Dirichlet Regression in R |

dirmcmc | Directional Metropolis Hastings Algorithm |

dirmult | Estimation in Dirichlet-Multinomial distribution |

DirStats | Nonparametric Methods for Directional Data |

disaggR | Two-Steps Benchmarks for Time Series Disaggregation |

disaggregation | Disaggregation Modelling |

disastr.api | Wrapper for the UN OCHA ReliefWeb Disaster Events API |

DIscBIO | A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics |

discfrail | Cox Models for Time-to-Event Data with Nonparametric Discrete Group-Specific Frailties |

discgolf | Discourse API Client |

discharge | Fourier Analysis of Discharge Data |

disclap | Discrete Laplace Exponential Family |

disclapmix | Discrete Laplace Mixture Inference using the EM Algorithm |

discnorm | Test for Discretized Normality in Ordinal Data |

disco | Discordance and Concordance of Transcriptomic Responses |

discord | Functions for Discordant Kinship Modeling |

discourseGT | Analyze Group Patterns using Graph Theory in Educational Settings |

discoveR | Exploratory Data Analysis System |

discoverableresearch | Checks Title, Abstract and Keywords to Optimise Discoverability |

discretecdAlgorithm | Coordinate-Descent Algorithm for Learning Sparse Discrete Bayesian Networks |

DiscreteFDR | Multiple Testing Procedures with Adaptation for Discrete Tests |

DiscreteInverseWeibull | Discrete Inverse Weibull Distribution |

DiscreteLaplace | Discrete Laplace Distributions |

discreteMTP | Multiple testing procedures for discrete test statistics |

DiscreteQvalue | Improved q-Values for Discrete Uniform and Homogeneous Tests |

discreteRV | Create and Manipulate Discrete Random Variables |

DiscreteWeibull | Discrete Weibull Distributions (Type 1 and 3) |

discretization | Data preprocessing, discretization for classification |

discrim | Model Wrappers for Discriminant Analysis |

DiscriMiner | Tools of the Trade for Discriminant Analysis |

discSurv | Discrete Time Survival Analysis |

disdat | Data for Comparing Species Distribution Modeling Methods |

diseasemapping | Modelling Spatial Variation in Disease Risk for Areal Data |

diseq | Estimation Methods for Markets in Equilibrium and Disequilibrium |

Disequilibrium | Disequilibrium Models |

DisHet | Estimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples |

DisimForMixed | Calculate Dissimilarity Matrix for Dataset with Mixed Attributes |

DisImpact | Calculates Disproportionate Impact When Binary Success Data are Disaggregated by Subgroups |

disk.frame | Larger-than-RAM Disk-Based Data Manipulation Framework |

diskImageR | A Pipeline to Analyze Resistance and Tolerance from Drug Disk Diffusion Assays |

dismo | Species Distribution Modeling |

disparityfilter | Disparity Filter Algorithm for Weighted Networks |

displayHTS | displayHTS |

dispmod | Modelling Dispersion in GLM |

disposables | Create Disposable R Packages for Testing |

dispRity | Measuring Disparity |

dissever | Spatial Downscaling using the Dissever Algorithm |

DiSSMod | Fitting Sample Selection Models for Discrete Response Variables |

dissUtils | Utilities for making pairwise comparisons of multivariate data |

Distance | Distance Sampling Detection Function and Abundance Estimation |

distance.sample.size | Calculates Study Size Required for Distance Sampling |

distances | Tools for Distance Metrics |

distantia | Assessing Dissimilarity Between Multivariate Time Series |

DistatisR | DiSTATIS Three Way Metric Multidimensional Scaling |

distcomp | Computations over Distributed Data without Aggregation |

distcrete | Discrete Distribution Approximations |

distdichoR | Distributional Method for the Dichotomisation of Continuous Outcomes |

distdrawr | Download Occurrence Data of Vascular Plants in Germany from the FLORKART Database |

distfree.cr | Distribution-Free Confidence Region |

distill | 'R Markdown' Format for Scientific and Technical Writing |

distillery | Method Functions for Confidence Intervals and to Distill Information from an Object |

disto | Unified Interface to Distance, Dissimilarity, Similarity Matrices |

distory | Distance Between Phylogenetic Histories |

distr | Object Oriented Implementation of Distributions |

distr6 | The Complete R6 Probability Distributions Interface |

distrDoc | Documentation for 'distr' Family of R Packages |

distreg.vis | Framework for the Visualization of Distributional Regression Models |

distrEllipse | S4 Classes for Elliptically Contoured Distributions |

distrEx | Extensions of Package 'distr' |

DISTRIB | Four Essential Functions for Statistical Distributions Analysis: A New Functional Approach |

distribglm | Distributed Generalized Linear Models |

distributional | Vectorised Probability Distributions |

DistributionFitR | Fitting Multiple Parametric Distributions |

DistributionOptimization | Distribution Optimization |

distributions3 | Probability Distributions as S3 Objects |

distributionsrd | Distribution Fitting and Evaluation |

DistributionTest | Powerful Goodness-of-Fit Tests Based on the Likelihood Ratio |

DistributionUtils | Distribution Utilities |

distrMod | Object Oriented Implementation of Probability Models |

distro | Linux Distribution Properties |

distrom | Distributed Multinomial Regression |

distrr | Estimate and Manage Empirical Distributions |

distrRmetrics | Distribution Classes for Distributions from Rmetrics |

distrSim | Simulation Classes Based on Package 'distr' |

distrTeach | Extensions of Package 'distr' for Teaching Stochastics/Statistics in Secondary School |

distrTEst | Estimation and Testing Classes Based on Package 'distr' |

distTails | A Collection of Full Defined Distribution Tails |

disttools | Distance Object Manipulation Tools |

dittodb | A Test Environment for Database Requests |

divDyn | Diversity Dynamics using Fossil Sampling Data |

DivE | Diversity Estimator |

diveMove | Dive Analysis and Calibration |

diverge | Evolutionary Trait Divergence Between Sister Species and Other Paired Lineages |

diverse | Diversity Measures for Complex Systems |

DiversificationR | Econometric Tools to Measure Portfolio Diversification |

diversitree | Comparative 'Phylogenetic' Analyses of Diversification |

diveRsity | A Comprehensive, General Purpose Population Genetics Analysis Package |

diversityForest | Complex Split Procedures in Random Forests Through Candidate Split Sampling |

DiversityOccupancy | Building Diversity Models from Multiple Species Occupancy Models |

divest | Get Images Out of DICOM Format Quickly |

divo | Tools for Analysis of Diversity and Similarity in Biological Systems |

dixon | Nearest Neighbour Contingency Table Analysis |

dixonTest | Dixon's Ratio Test for Outlier Detection |

diyar | Multistage Record Linkage and Case Definition for Epidemiological Analysis |

DIZutils | Utilities for 'DIZ' R Package Development |

DJL | Distance Measure Based Judgment and Learning |

dkanr | Client for the 'DKAN' API |

dkDNA | Diffusion Kernels on a Set of Genotypes |

dLagM | Time Series Regression Models with Distributed Lag Models |

DLASSO | Implementation of Adaptive or Non-Adaptive Differentiable Lasso and SCAD Penalties in Linear Models |

dlbayes | Use Dirichlet Laplace Prior to Solve Linear Regression Problem and Do Variable Selection |

dlib | Allow Access to the 'Dlib' C++ Library |

dlm | Bayesian and Likelihood Analysis of Dynamic Linear Models |

DLMtool | Data-Limited Methods Toolkit |

dlnm | Distributed Lag Non-Linear Models |

dlookr | Tools for Data Diagnosis, Exploration, Transformation |

dlsem | Distributed-Lag Linear Structural Equation Models |

dlstats | Download Stats of R Packages |

dm | Relational Data Models |

dma | Dynamic Model Averaging |

dmacs | Measurement Nonequivalence Effect Size Calculator |

dmai | Divisia Monetary Aggregates Index |

dmbc | Model Based Clustering of Binary Dissimilarity Measurements |

DMCfun | Diffusion Model of Conflict (DMC) in Reaction Time Tasks |

dmdScheme | Domain Specific MetaData Scheme |

dml | Distance Metric Learning in R |

DMLLZU | Double Machine Learning |

dmm | Dyadic Mixed Model for Pedigree Data |

DMMF | Daily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model |

dMod | Dynamic Modeling and Parameter Estimation in ODE Models |

DMRMark | DMR Detection by Non-Homogeneous Hidden Markov Model from Methylation Array Data |

DMRnet | Delete or Merge Regressors Algorithms for Linear and Logistic Model Selection and High-Dimensional Data |

dmt | Dependency Modeling Toolkit |

DMTL | Tools for Applying Distribution Mapping Based Transfer Learning |

dmtools | Tools for Clinical Data Management |

dmutate | Mutate Data Frames with Random Variates |

DMwR2 | Functions and Data for the Second Edition of "Data Mining with R" |

dna | Differential Network Analysis |

DNAseqtest | Generating and Testing DNA Sequences |

DNAtools | Tools for Analysing Forensic Genetic DNA Data |

DnE | Distribution and Equation |

dnet | Integrative Analysis of Omics Data in Terms of Network, Evolution and Ontology |

dng | Distributions and Gradients |

DNLC | Differential Network Local Consistency Analysis |

DNMF | Discriminant Non-Negative Matrix Factorization |

dnr | Simulate Dynamic Networks using Exponential Random Graph Models (ERGM) Family |

do | Data Operator |

DOBAD | Analysis of Discretely Observed Linear Birth-and-Death(-and-Immigration) Markov Chains |

dobin | Dimension Reduction for Outlier Detection |

dobson | Data from the GLM Book by Dobson and Barnett |

doBy | Groupwise Statistics, LSmeans, Linear Contrasts, Utilities |

doc2concrete | Measuring Concreteness in Natural Language |

doc2vec | Distributed Representations of Sentences, Documents and Topics |

docdescriptR | Automatic Reporter for Descriptive Analysis |

docinfeR | Automatic Reporter for Inference Analysis |

dockerfiler | Easy Dockerfile Creation from R |

docknitr | Use Docker Images to Process Rmarkdown Blocks |

doconv | Document Conversion to 'PDF' or 'PNG' |

docopt | Command-Line Interface Specification Language |

docopulae | Optimal Designs for Copula Models |

docstring | Provides Docstring Capabilities to R Functions |

documair | Automatic Documentation for R packages |

document | Run 'roxygen2' on (Chunks of) Single Code Files |

documenter | Documents Files |

docuSignr | Connect to 'DocuSign' API |

docxtools | Tools for R Markdown to Docx Documents |

docxtractr | Extract Data Tables and Comments from 'Microsoft' 'Word' Documents |

Dodge | Acceptance Sampling Ideas Originated by H.F. Dodge |

dodgr | Distances on Directed Graphs |

DoE.base | Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages |

DoE.MIParray | Creation of Arrays by Mixed Integer Programming |

DoE.multi.response | Construct Multi-Response Experimental Designs |

DoE.wrapper | Wrapper Package for Design of Experiments Functionality |

doebioresearch | Analysis of Design of Experiments for Biological Research |

DoEstRare | Rare Variant Association Test Based on Position Density Estimation |

doex | The One-Way Heteroscedastic ANOVA Tests |

doFuture | A Universal Foreach Parallel Adapter using the Future API of the 'future' Package |

doMC | Foreach Parallel Adaptor for 'parallel' |

Dominance | Calculate and Visualize Dominance Hierarchies |

dominanceanalysis | Dominance Analysis |

domino | R Console Bindings for the 'Domino Command-Line Client' |

domir | Tools to Support Relative Importance Analysis |

doMPI | Foreach Parallel Adaptor for the Rmpi Package |

donut | Nearest Neighbour Search with Variables on a Torus |

doParallel | Foreach Parallel Adaptor for the 'parallel' Package |

DOPE | Drug Ontology Parsing Engine |

doremi | Dynamics of Return to Equilibrium During Multiple Inputs |

doRNG | Generic Reproducible Parallel Backend for 'foreach' Loops |

DOS | Design of Observational Studies |

DOS2 | Design of Observational Studies, Companion to the Second Edition |

dosearch | Causal Effect Identification from Multiple Incomplete Data Sources |

dosedesignR | Interactive Designing of Dose Finding Studies |

DoseFinding | Planning and Analyzing Dose Finding Experiments |

doSNOW | Foreach Parallel Adaptor for the 'snow' Package |

dosresmeta | Multivariate Dose-Response Meta-Analysis |

dostats | Compute Statistics Helper Functions |

DOT | Render and Export DOT Graphs in R |

DoTC | Distribution of Typicality Coefficients |

dotCall64 | Enhanced Foreign Function Interface Supporting Long Vectors |

dotdot | Enhanced Assignment Operator to Overwrite or Grow Objects |

dotenv | Load Environment Variables from '.env' |

dotgen | Gene-Set Analysis via Decorrelation by Orthogonal Transformation |

dotwhisker | Dot-and-Whisker Plots of Regression Results |

doubcens | Survivor Function Estimation for Doubly Interval-Censored Failure Time Data |

double.truncation | Analysis of Doubly-Truncated Data |

DoubleCone | Test Against Parametric Regression Function |

DoubleExpSeq | Differential Exon Usage Test for RNA-Seq Data via Empirical Bayes Shrinkage of the Dispersion Parameter |

DoubleML | Double Machine Learning in R |

doubt | Enable Operators Containing the '?' Symbol |

DOvalidation | Kernel Hazard Estimation with Best One-Sided and Double One-Sided Cross-Validation |

DOVE | Durability of Vaccine Efficacy |

Dowd | Functions Ported from 'MMR2' Toolbox Offered in Kevin Dowd's Book Measuring Market Risk |

downlit | Syntax Highlighting and Automatic Linking |

downloader | Download Files over HTTP and HTTPS |

downloadthis | Implement Download Buttons in 'rmarkdown' |

downscaledl | Downscale of RS Images using Deep Learning |

downsize | A Tool to Downsize Large Workflows for Testing |

dpa | Dynamic Path Approach |

dparser | Port of 'Dparser' Package |

DPBBM | Dirichlet Process Beta-Binomial Mixture |

dpcid | Differential Partial Correlation IDentification |

dPCP | Automated Analysis of Multiplex Digital PCR Data |

Dpit | Distribution Pitting |

dplR | Dendrochronology Program Library in R |

dplRCon | Concordance for Dendroclimatology |

dplyr | A Grammar of Data Manipulation |

dplyr.teradata | A 'Teradata' Backend for 'dplyr' |

dplyrAssist | RStudio Addin for Teaching and Learning Data Manipulation Using 'dplyr' |

dpmr | Data Package Manager for R |

DPP | Inference of Parameters of Normal Distributions from a Mixture of Normals |

dppmix | Determinantal Point Process Mixture Models |

DPQ | Density, Probability, Quantile ('DPQ') Computations |

DPQmpfr | DPQ (Density, Probability, Quantile) Distribution Computations using MPFR |

dprint | Print Tabular Data to Graphics Device |

dpseg | Piecewise Linear Segmentation by Dynamic Programming |

DPtree | Dirichlet-Based Polya Tree |

DPWeibull | Dirichlet Process Weibull Mixture Model for Survival Data |

dqrng | Fast Pseudo Random Number Generators |

dr | Methods for Dimension Reduction for Regression |

dr4pl | Dose Response Data Analysis using the 4 Parameter Logistic (4pl) Model |

dracor | Decode Draco Format 3D Mesh Data |

dragon | Deep Time Redox Analysis of the Geobiology Ontology Network |

dragonking | Statistical Tools to Identify Dragon Kings |

dragracer | Data Sets for RuPaul's Drag Race |

dragulaR | Drag and Drop Elements in 'Shiny' using 'Dragula Javascript Library' |

drake | A Pipeline Toolkit for Reproducible Computation at Scale |

DramaAnalysis | Analysis of Dramatic Texts |

drat | 'Drat' R Archive Template |

draw | Wrapper Functions for Producing Graphics |

drawer | An Interactive HTML Image Editing Tool |

DRaWR | Discriminative Random Walk with Restart |

drawsample | Draw Samples with the Desired Properties from a Data Set |

DRAYL | Computation of Rayleigh Densities of Arbitrary Dimension |

DrBats | Data Representation: Bayesian Approach That's Sparse |

drc | Analysis of Dose-Response Curves |

DRDID | Doubly Robust Difference-in-Differences Estimators |

dreamerr | Error Handling Made Easy |

DREGAR | Regularized Estimation of Dynamic Linear Regression in the Presence of Autocorrelated Residuals (DREGAR) |

drf | Distributional Random Forests |

drfit | Dose-Response Data Evaluation |

drgee | Doubly Robust Generalized Estimating Equations |

DRHotNet | Differential Risk Hotspots in a Linear Network |

drhur | Learning R with Dr. Hu |

DriftBurstHypothesis | Calculates the Test-Statistic for the Drift Burst Hypothesis |

drifter | Concept Drift and Concept Shift Detection for Predictive Models |

DrillR | R Driver for Apache Drill |

drimmR | Estimation, Simulation and Reliability of Drifting Markov Models |

DrImpute | Imputing Dropout Events in Single-Cell RNA-Sequencing Data |

DrInsight | Drug Repurposing: Integration and Systematic Investigation of Genomic High Throughput Data |

DRIP | Discontinuous Regression and Image Processing |

DriveML | Self-Drive Machine Learning Projects |

driveR | Prioritizing Cancer Driver Genes Using Genomics Data |

drmdel | Dual Empirical Likelihood Inference under Density Ratio Models in the Presence of Multiple Samples |

DRomics | Dose Response for Omics |

dropR | Analyze Drop Out of an Experiment or Survey |

droptest | Simulates LOX Drop Testing |

drord | Doubly-Robust Estimators for Ordinal Outcomes |

drought | Statistical Modeling and Assessment of Drought |

DRR | Dimensionality Reduction via Regression |

drtmle | Doubly-Robust Nonparametric Estimation and Inference |

DrugClust | Implementation of a Machine Learning Framework for Predicting Drugs Side Effects |

drumr | Turn R into a Drum Machine |

ds | Descriptive Statistics |

ds4psy | Data Science for Psychologists |

dsa | Seasonal Adjustment of Daily Time Series |

DSAIDE | Dynamical Systems Approach to Infectious Disease Epidemiology (Ecology/Evolution) |

DSAIRM | Dynamical Systems Approach to Immune Response Modeling |

dsample | Discretization-Based Direct Random Sample Generation |

dsb | Normalize & Denoise Droplet Single Cell Protein Data (CITE-seq) |

DSBayes | Bayesian subgroup analysis in clinical trials |

dscore | D-Score for Child Development |

dse | Dynamic Systems Estimation (Time Series Package) |

DSI | 'DataSHIELD' Interface |

DSjobtracker | What Skills and Qualifications are Required for Data Science Related Jobs? |

DSL | Distributed Storage and List |

dslabs | Data Science Labs |

dslice | Dynamic Slicing |

DSLite | 'DataSHIELD' Implementation on Local Datasets |

dsm | Density Surface Modelling of Distance Sampling Data |

dsmisc | Data Science Box of Pandora Miscellaneous |

DSMolgenisArmadillo | 'DataSHIELD' Client for 'MOLGENIS Armadillo' |

DSOpal | 'DataSHIELD' Implementation for 'Opal' |

DSpoty | Get 'Spotify' API Multiple Information |

dsrTest | Tests and Confidence Intervals on Directly Standardized Rates for Several Methods |

DSSAT | A Comprehensive R Interface for the DSSAT Cropping Systems Model |

dssd | Distance Sampling Survey Design |

DSsim | Distance Sampling Simulations |

dst | Using the Theory of Belief Functions |

dstack | Publishing Interactive Plots |

DstarM | Analyze Two Choice Reaction Time Data with the D*M Method |

dstat | Conditional Sensitivity Analysis for Matched Observational Studies |

DStree | Recursive Partitioning for Discrete-Time Survival Trees |

dSVA | Direct Surrogate Variable Analysis |

DSviaDRM | Exploring Disease Similarity in Terms of Dysfunctional Regulatory Mechanisms |

DSWE | Data Science for Wind Energy |

DT | A Wrapper of the JavaScript Library 'DataTables' |

dtangle | Cell Type Deconvolution from Gene Expressions |

DTAplots | Creates Plots Accompanying Bayesian Diagnostic Test Accuracy Meta-Analyses |

DTAT | Dose Titration Algorithm Tuning |

DTAXG | Diagnostic Test Assessment in the Absence of Gold Standard |

DTComPair | Comparison of Binary Diagnostic Tests in a Paired Study Design |

DtD | Distance to Default |

DTDA | Doubly Truncated Data Analysis |

DTDA.cif | Doubly Truncated Data Analysis, Cumulative Incidence Functions |

DTDA.ni | Doubly Truncated Data Analysis, Non Iterative |

dti | Analysis of Diffusion Weighted Imaging (DWI) Data |

DTK | Dunnett-Tukey-Kramer Pairwise Multiple Comparison Test Adjusted for Unequal Variances and Unequal Sample Sizes |

DTMCPack | Suite of functions related to discrete-time discrete-state Markov Chains |

dtp | Dynamic Panel Threshold Model |

dtpcrm | Dose Transition Pathways for Continual Reassessment Method |

dtplyr | Data Table Back-End for 'dplyr' |

DTR | Estimation and Comparison of Dynamic Treatment Regimes |

dtree | Decision Trees |

DTRlearn2 | Statistical Learning Methods for Optimizing Dynamic Treatment Regimes |

DTRreg | DTR Estimation and Inference via G-Estimation, Dynamic WOLS, Q-Learning, and Dynamic Weighted Survival Modeling (DWSurv) |

dtrSurv | Dynamic Treatment Regimes for Survival Analysis |

DTSg | A Class for Working with Time Series Based on 'data.table' and 'R6' with Largely Optional Reference Semantics |

dtt | Discrete Trigonometric Transforms |

dttr2 | Manipulate Date, POSIXct and hms Vectors |

dtw | Dynamic Time Warping Algorithms |

DTWBI | Imputation of Time Series Based on Dynamic Time Warping |

dtwclust | Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance |

dtwSat | Time-Weighted Dynamic Time Warping for Satellite Image Time Series Analysis |

DTWUMI | Imputation of Multivariate Time Series Based on Dynamic Time Warping |

dual | Automatic Differentiation with Dual Numbers |

dualtrees | Decimated and Undecimated 2D Complex Dual-Tree Wavelet Transform |

duawranglr | Securely Wrangle Dataset According to Data Usage Agreement |

dub | Unpacking Assignment for Lists via Pattern Matching |

DUBStepR | Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data |

duckdb | DBI Package for the DuckDB Database Management System |

duckduckr | Simple Client for the DuckDuckGo Instant Answer API |

dumbbell | Displaying Changes Between Two Points Using Dumbbell Plots |

dummies | Create dummy/indicator variables flexibly and efficiently |

dummy | Automatic Creation of Dummies with Support for Predictive Modeling |

dundermifflin | The Office Quotes on-Demand |

dunn.test | Dunn's Test of Multiple Comparisons Using Rank Sums |

DunnettTests | Software implementation of step-down and step-up Dunnett test procedures |

dupiR | Bayesian inference from count data using discrete uniform priors |

dupree | Identify Duplicated R Code in a Project |

durmod | Mixed Proportional Hazard Competing Risk Model |

DVHmetrics | Analyze Dose-Volume Histograms and Check Constraints |

dvir | Disaster Victim Identification |

dvmisc | Convenience Functions, Moving Window Statistics, and Graphics |

dvqcc | Dynamic VAR - Based Control Charts for Batch Process Monitoring |

DWBmodelUN | Dynamic Water Balance a Hydrological Model |

DWDLargeR | Fast Algorithms for Large Scale Generalized Distance Weighted Discrimination |

dwdradar | Read Binary Radar Files from 'DWD' (German Weather Service) |

DWLasso | Degree Weighted Lasso |

dwlm | Doubly Weighted Linear Model |

DWreg | Parametric Regression for Discrete Response |

dyads | Dyadic Network Analysis |

dycdtools | Tools for DYRESM-CAEDYM Model Development: Calibration Assistant and Post-Processing |

dydea | Detection of Chaotic and Regular Intervals in the Data |

dygraphs | Interface to 'Dygraphs' Interactive Time Series Charting Library |

Dykstra | Quadratic Programming using Cyclic Projections |

DYM | Did You Mean? |

dyn | Time Series Regression |

dynamac | Dynamic Simulation and Testing for Single-Equation ARDL Models |

DynamicDistribution | Dynamically visualized probability distributions and their moments |

DynamicGP | Modelling and Analysis of Dynamic Computer Experiments |

dynamicGraph | dynamicGraph |

dynamichazard | Dynamic Hazard Models using State Space Models |

dynamicTreeCut | Methods for Detection of Clusters in Hierarchical Clustering Dendrograms |

DynaRankR | Inferring Longitudinal Dominance Hierarchies |

DynareR | A Seamless Integration of 'R' and 'Dynare' |

dynaSpec | Dynamic Spectrogram Visualizations |

dynatopmodel | Implementation of the Dynamic TOPMODEL Hydrological Model |

dynaTree | Dynamic Trees for Learning and Design |

dynBiplotGUI | Full Interactive GUI for Dynamic Biplot in R |

DynClust | Denoising and clustering for dynamical image sequence (2D or 3D)+T |

DynComm | Dynamic Network Communities Detection and Generation |

dyncomp | Complexity of Short and Coarse-Grained Time Series |

dynCorr | Dynamic Correlation Package |

dyndimred | Dimensionality Reduction Methods in a Common Format |

dynetNLAResistance | Resisting Neighbor Label Attack in a Dynamic Network |

dyngen | A Multi-Modal Simulator for Spearheading Single-Cell Omics Analyses |

dynia | Fit Dynamic Intervention Model |

dynlm | Dynamic Linear Regression |

dynmix | Estimation of Dynamic Finite Mixtures |

DynNom | Visualising Statistical Models using Dynamic Nomograms |

dynpanel | Dynamic Panel Data Models |

dynparam | Creating Meta-Information for Parameters |

dynpred | Companion Package to "Dynamic Prediction in Clinical Survival Analysis" |

dynprog | Dynamic Programming Domain-Specific Language |

dynr | Dynamic Models with Regime-Switching |

dynRB | Dynamic Range Boxes |

dynsbm | Dynamic Stochastic Block Models |

dynsim | Dynamic Simulations of Autoregressive Relationships |

dynsurv | Dynamic Models for Survival Data |

DynTxRegime | Methods for Estimating Optimal Dynamic Treatment Regimes |

dynutils | Common Functionality for the 'dynverse' Packages |

dynwrap | Representing and Inferring Single-Cell Trajectories |

DySeq | Functions for Dyadic Sequence Analyses |

DysPIA | Dysregulated Pathway Identification Analysis |

DysPIAData | Background and Pathway Data Used in 'DysPIA' |

e1071 | Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien |

E4tools | Management and Processing Tools for Data Produced by the Empatica E4 |

eadrm | Fitting Dose-Response Models Using an Evolutionary Algorithm |

eaf | Plots of the Empirical Attainment Function |

Eagle | Multiple Locus Association Mapping on a Genome-Wide Scale |

EAinference | Estimator Augmentation and Simulation-Based Inference |

eAnalytics | Dynamic Web-Based Analytics for the Energy Industry |

earlygating | Properties of Bayesian Early Gating Designs |

earlyR | Estimation of Transmissibility in the Early Stages of a Disease Outbreak |

earlywarnings | Early Warning Signals Toolbox for Detecting Critical Transitions in Timeseries |

earth | Multivariate Adaptive Regression Splines |

earthtide | Parallel Implementation of 'ETERNA 3.40' for Prediction and Analysis of Earth Tides |

earthtones | Derive a Color Palette from a Particular Location on Earth |

EasyABC | Efficient Approximate Bayesian Computation Sampling Schemes |

easyAHP | Analytic Hierarchy Process (AHP) |

easyalluvial | Generate Alluvial Plots with a Single Line of Code |

easyanova | Analysis of Variance and Other Important Complementary Analyses |

easyCODA | Compositional Data Analysis in Practice |

easycsv | Load Multiple 'csv' and 'txt' Tables |

easyDes | An Easy Way to Descriptive Analysis |

EasyDescribe | A Convenient Way of Descriptive Statistics |

EasyHTMLReport | EasyHTMLReport |

EasyMx | Easy Model-Builder Functions for 'OpenMx' |

easyNCDF | Tools to Easily Read/Write NetCDF Files into/from Multidimensional R Arrays |

easynls | Easy Nonlinear Model |

easypackages | Easy Loading and Installing of Packages |

easypower | Sample Size Estimation for Experimental Designs |

easyPSID | Reading, Formatting, and Organizing the Panel Study of Income Dynamics (PSID) |

easyPubMed | Search and Retrieve Scientific Publication Records from PubMed |

easyr | Helpful Functions from Oliver Wyman Actuarial Consulting |

easyreg | Easy Regression |

easySdcTable | Easy Interface to the Statistical Disclosure Control Package 'sdcTable' |

easySVG | An Easy SVG Basic Elements Generator |

easyVerification | Ensemble Forecast Verification for Large Data Sets |

eat | Efficiency Analysis Trees |

eatATA | Create Constraints for Small Test Assembly Problems |

eatDB | Spreadsheet Interface for Relational Databases |

eatGADS | Data Management of Large Hierarchical Data |

eatRep | Educational Assessment Tools for Replication Methods |

eatTools | Miscellaneous Functions for the Analysis of Educational Assessments |

eba | Elimination-by-Aspects Models |

ebal | Entropy reweighting to create balanced samples |

EBASS | Sample Size Calculation Method for Cost-Effectiveness Studies Based on Expected Value of Perfect Information |

EbayesThresh | Empirical Bayes Thresholding and Related Methods |

ebdbNet | Empirical Bayes Estimation of Dynamic Bayesian Networks |

EBEN | Empirical Bayesian Elastic Net |

ebGenotyping | Genotyping and SNP Detection using Next Generation Sequencing Data |

EBglmnet | Empirical Bayesian Lasso and Elastic Net Methods for Generalized Linear Models |

ebirdst | Access and Analyze eBird Status and Trends Data |

EBMAforecast | Estimate Ensemble Bayesian Model Averaging Forecasts using Gibbs Sampling or EM-Algorithms |

ebmstate | Empirical Bayes Multi-State Cox Model |

EBPRS | Derive Polygenic Risk Score Based on Emprical Bayes Theory |

EBrank | Empirical Bayes Ranking |

ebreg | Implementation of the Empirical Bayes Method |

eBsc | "Empirical Bayes Smoothing Splines with Correlated Errors" |

ebSNP | Genotyping and SNP calling using single-sample next generation sequencing data |

ec50estimator | An Automated Way to Estimate EC50 for Stratified Datasets |

ecap | Excess Certainty Adjusted Probability Estimate |

eCAR | Eigenvalue CAR Models |

ecb | Programmatic Access to the European Central Bank's Statistical Data Warehouse |

ecce | Translate English Words into Chinese, or Translate Chinese Words into English |

ECctmc | Simulation from Endpoint-Conditioned Continuous Time Markov Chains |

ecd | Elliptic Lambda Distribution and Option Pricing Model |

Ecdat | Data Sets for Econometrics |

ecdfHT | Empirical CDF for Heavy Tailed Data |

ecespa | Functions for Spatial Point Pattern Analysis |

Ecfun | Functions for 'Ecdat' |

ECGofTestDx | A Goodness-of-Fit Test for Elliptical Distributions with Diagnostic Capabilities |

ech | Toolbox for ECH with R |

ECharts2Shiny | Embedding Interactive Charts Generated with ECharts Library into Shiny Applications |

echarts4r | Create Interactive Graphs with 'Echarts JavaScript' Version 5 |

echarty | Minimal R/Shiny Interface to Library 'ECharts JavaScript' |

echelon | The Echelon Analysis and the Detection of Spatial Clusters using Echelon Scan Method |

eChem | Simulations for Electrochemistry Experiments |

echo.find | Finding Rhythms Using Extended Circadian Harmonic Oscillators (ECHO) |

echogram | Echogram Visualisation and Analysis |

echor | Access EPA 'ECHO' Data |

ecipex | Efficient Calculation of Fine Structure Isotope Patterns via Fourier Transforms of Simplex-Based Elemental Models |

ECLRMC | Ensemble Correlation-Based Low-Rank Matrix Completion |

eclust | Environment Based Clustering for Interpretable Predictive Models in High Dimensional Data |

ecm | Build Error Correction Models |

ecmwfr | Interface to 'ECMWF' and 'CDS' Data Web Services |

ecochange | Integrating Ecological Remote Sensing Data to Derive EBV Metrics |

ecoCopula | Graphical Modelling and Ordination using Copulas |

EcoDiet | Estimating a Diet Matrix from Biotracer and Stomach Content Data |

ecodist | Dissimilarity-Based Functions for Ecological Analysis |

Ecohydmod | Ecohydrological Modelling |

EcoHydRology | A Community Modeling Foundation for Eco-Hydrology |

EcoIndR | Ecological Indicators |

ECoL | Complexity Measures for Supervised Problems |

ecolMod | "A practical guide to ecological modelling - using R as a simulation platform" |

ecolottery | Coalescent-Based Simulation of Ecological Communities |

ecolTest | Community Ecology Tests |

EconDemand | General Analysis of Various Economics Demand Systems |

econet | Estimation of Parameter-Dependent Network Centrality Measures |

EcoNetGen | Simulate and Sample from Ecological Interaction Networks |

econetwork | Analyzing Ecological Networks |

economiccomplexity | Computational Methods for Economic Complexity |

ecoreg | Ecological Regression using Aggregate and Individual Data |

ecorest | Conducts Analyses Informing Ecosystem Restoration Decisions |

ecosim | Toolbox for Aquatic Ecosystem Modeling |

ECOSolveR | Embedded Conic Solver in R |

ecospace | Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks |

ecospat | Spatial Ecology Miscellaneous Methods |

ecostats | Code and Data Accompanying the Eco-Stats Text |

EcotoneFinder | Characterising and Locating Ecotones and Communities |

ecotox | Analysis of Ecotoxicology |

ecotoxicology | Methods for Ecotoxicology |

EcoTroph | EcoTroph R package |

ecoval | Procedures for Ecological Assessment of Surface Waters |

EcoVirtual | Simulation of Ecological Models |

ecp | Non-Parametric Multiple Change-Point Analysis of Multivariate Data |

ecr | Evolutionary Computation in R |

ectotemp | Quantitative Estimates of Small Ectotherm Temperature Regulation Effectiveness |

ECTTDNN | Cointegration Based Timedelay Neural Network Model |

Ecume | Equality of 2 (or k) Continuous Univariate and Multivariate Distributions |

ed50 | Estimate ED50 and Its Confidence Interval |

ed50simulation | Estimate ED50 and Its Confidence Interval |

EDA | Energy Decomposition Analysis |

eda4treeR | Experimental Design and Analysis for Tree Improvement |

edbuildmapr | Download School District Geospatial Data, Perform Spatial Analysis, and Create Formatted Exportable Maps |

edbuildr | Automated School District Data Download and Processing |

edcc | Economic Design of Control Charts |

edci | Edge Detection and Clustering in Images |

eddi | Get Evaporative Demand Drought Index Raster Data |

eddington | Compute a Cyclist's Eddington Number |

edeaR | Exploratory and Descriptive Event-Based Data Analysis |

edeR | Email Data Extraction Using R |

edf | Read Data from European Data Format (EDF and EDF+) Files |

EDFIR | Estimating Discrimination Factors |

edfReader | Reading EDF(+) and BDF(+) Files |

edfun | Creating Empirical Distribution Functions |

edgar | Tool for the U.S. SEC EDGAR Retrieval and Parsing of Corporate Filings |

edgarWebR | SEC Filings Access |

edgebundleR | Circle Plot with Bundled Edges |

edgeCorr | Spatial Edge Correction |

edgedata | Datasets that Support the EDGE Server DIY Logic |

edgeRun | More Powerful Unconditional Testing of Negative Binomial Means for Digital Gene Expression Data |

edina | Bayesian Estimation of an Exploratory Deterministic Input, Noisy and Gate Model |

EDISON | Network Reconstruction and Changepoint Detection |

editData | 'RStudio' Addin for Editing a 'data.frame' |

EditImputeCont | Simultaneous Edit-Imputation for Continuous Microdata |

editrules | Parsing, Applying, and Manipulating Data Cleaning Rules |

edl | Toolbox for Error-Driven Learning Simulations with Two-Layer Networks |

eDMA | Dynamic Model Averaging with Grid Search |

edmdata | Data Sets for Psychometric Modeling |

EDMeasure | Energy-Based Dependence Measures |

EDNE.EQ | Implements the EDNE-Test for Equivalence |

EDOIF | Empirical Distribution Ordering Inference Framework (EDOIF) |

EDOtrans | Euclidean Distance-Optimized Data Transformation |

edrGraphicalTools | Provides Tools for Dimension Reduction Methods |

edstan | Stan Models for Item Response Theory |

EdSurvey | Analysis of NCES Education Survey and Assessment Data |

educineq | Compute and Decompose Inequality in Education |

edwards97 | Langmuir Semi-Empirical Coagulation Model |

eechidna | Exploring Election and Census Highly Informative Data Nationally for Australia |

eefAnalytics | Robust Analytical Methods for Evaluating Educational Interventions using Randomised Controlled Trials Designs |

eegkit | Toolkit for Electroencephalography Data |

eegkitdata | Data for package eegkit |

eel | Extended Empirical Likelihood |

EEM | Read and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data |

EEMDelm | Ensemble Empirical Mode Decomposition and Its Variant Based ELM Model |

eemdTDNN | EEMD and Its Variant Based Time Delay Neural Network Model |

eemR | Tools for Pre-Processing Emission-Excitation-Matrix (EEM) Fluorescence Data |

eeptools | Convenience Functions for Education Data |

eesim | Simulate and Evaluate Time Series for Environmental Epidemiology |

ef | Modelling Framework for the Estimation of Salmonid Abundance |

EFA.dimensions | Exploratory Factor Analysis Functions for Assessing Dimensionality |

EFA.MRFA | Dimensionality Assessment Using Minimum Rank Factor Analysis |

EFAtools | Fast and Flexible Implementations of Exploratory Factor Analysis Tools |

EFAutilities | Utility Functions for Exploratory Factor Analysis |

EFDR | Wavelet-Based Enhanced FDR for Detecting Signals from Complete or Incomplete Spatially Aggregated Data |

EffectLiteR | Average and Conditional Effects |

effectR | Predicts Oomycete Effectors |

effects | Effect Displays for Linear, Generalized Linear, and Other Models |

effectsize | Indices of Effect Size and Standardized Parameters |

effectsizescr | Indices for Single-Case Research |

EffectsRelBaseline | Test changes of a grouped response relative to baseline |

EffectStars | Visualization of Categorical Response Models |

EffectStars2 | Effect Stars |

EffectTreat | Prediction of Therapeutic Success |

EfficientMaxEigenpair | Efficient Initials for Computing the Maximal Eigenpair |

efflog | The Causal Effects for a Causal Loglinear Model |

effsize | Efficient Effect Size Computation |

eflm | Efficient Fitting of Linear and Generalized Linear Models |

efreadr | Read European Eddy Fluxes CSV Files |

eFRED | Fetch Data from the Federal Reserve Economic Database |

EFS | Tool for Ensemble Feature Selection |

efts | High-Level Functions to Read and Write Ensemble Forecast Time Series in netCDF |

ega | Error Grid Analysis |

EGAnet | Exploratory Graph Analysis - A Framework for Estimating the Number of Dimensions in Multivariate Data Using Network Psychometrics |

egcm | Engle-Granger Cointegration Models |

egg | Extensions for 'ggplot2': Custom Geom, Custom Themes, Plot Alignment, Labelled Panels, Symmetric Scales, and Fixed Panel Size |

eggCounts | Hierarchical Modelling of Faecal Egg Counts |

egor | Import and Analyse Ego-Centered Network Data |

EGRET | Exploration and Graphics for RivEr Trends |

EGRETci | Exploration and Graphics for RivEr Trends Confidence Intervals |

eGST | Leveraging eQTLs to Identify Individual-Level Tissue of Interest for a Complex Trait |

eha | Event History Analysis |

ehaGoF | Calculates Goodness of Fit Statistics |

ehelp | Enhanced Help to Enable "Docstring"-Comments in Users Functions |

eHOF | Extended HOF (Huisman-Olff-Fresco) Models |

EHR | Electronic Health Record (EHR) Data Processing and Analysis Tool |

EHRtemporalVariability | Delineating Temporal Dataset Shifts in Electronic Health Records |

ei | Ecological Inference |

eia | API Wrapper for 'US Energy Information Administration' Open Data |

EIAdata | R Wrapper for the Energy Information Administration (EIA) API |

eicm | Explicit Interaction Community Models |

eiCompare | Compares Ecological Inference, Goodman, Rows by Columns Estimates |

eigeninv | Generates (dense) matrices that have a given set of eigenvalues |

eigenmodel | Semiparametric Factor and Regression Models for Symmetric Relational Data |

eigenprcomp | Computes confidence intervals for principal components |

EigenR | Complex Matrix Algebra with 'Eigen' |

eikosograms | The Picture of Probability |

EILA | Efficient Inference of Local Ancestry |

eimpute | Efficiently Impute Large Scale Incomplete Matrix |

einet | Effective Information and Causal Emergence |

eiPack | Ecological Inference and Higher-Dimension Data Management |

eirm | Explanatory Item Response Modeling for Dichotomous and Polytomous Items |

eive | An Algorithm for Reducing Errors-in-Variable Bias in Simple Linear Regression |

eivtools | Measurement Error Modeling Tools |

EIX | Explain Interactions in 'XGBoost' |

eixport | Export Emissions to Atmospheric Models |

EKMCMC | MCMC Procedures for Estimating Enzyme Kinetics Constants |

EL | Two-sample Empirical Likelihood |

EL2Surv | Empirical Likelihood (EL) for Comparing Two Survival Functions |

elaborator | A 'shiny' Application for Exploring Laboratory Data |

elasdics | Elastic Analysis of Sparse, Dense and Irregular Curves |

elasso | Enhanced Least Absolute Shrinkage and Selection Operator Regression Model |

elastic | General Purpose Interface to 'Elasticsearch' |

elasticIsing | Ising Network Estimation using Elastic Net and k-Fold Cross-Validation |

elasticnet | Elastic-Net for Sparse Estimation and Sparse PCA |

elasticsearchr | A Lightweight Interface for Interacting with Elasticsearch from R |

elec | Collection of Functions for Statistical Election Audits |

elec.strat | Functions for election audits using stratified random samples |

EleChemr | Electrochemical Reactions Simulation |

elect | Estimation of Life Expectancies Using Multi-State Models |

elections | USA Presidential Elections Data |

electionsBR | R Functions to Download and Clean Brazilian Electoral Data |

electivity | Algorithms for Electivity Indices |

electoral | Allocating Seats Methods and Party System Scores |

elementR | An Framework for Reducing Elemental LAICPMS Data from Solid Structures |

elevatr | Access Elevation Data from Various APIs |

elexr | Load Associated Press Election Results with Elex |

elfDistr | Kumaraswamy Complementary Weibull Geometric (Kw-CWG) Probability Distribution |

elhmc | Sampling from a Empirical Likelihood Bayesian Posterior of Parameters Using Hamiltonian Monte Carlo |

ELISAtools | ELISA Data Analysis with Batch Correction |

eList | List Comprehension and Tools |

elitism | Equipment for Logarithmic and Linear Time Stepwise Multiple Hypothesis Testing |

elliplot | Ellipse Summary Plot of Quantiles |

ellipse | Functions for Drawing Ellipses and Ellipse-Like Confidence Regions |

ellipsis | Tools for Working with ... |

elliptic | Weierstrass and Jacobi Elliptic Functions |

ellipticalsymmetry | Elliptical Symmetry Tests |

elmNNRcpp | The Extreme Learning Machine Algorithm |

ELMR | Extreme Machine Learning (ELM) |

ELMSO | Implementation of the Efficient Large-Scale Online Display Advertising Algorithm |

elo | Elo Ratings |

EloChoice | Preference Rating for Visual Stimuli Based on Elo Ratings |

EloOptimized | Optimized Elo Rating Method for Obtaining Dominance Ranks |

EloRating | Animal Dominance Hierarchies by Elo Rating |

elsa | Entropy-Based Local Indicator of Spatial Association |

ElstonStewart | Elston-Stewart Algorithm |

ELT | Experience Life Tables |

eltr | Utilise Catastrophe Model Event Loss Table Outputs |

ELYP | Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model |

EM.Fuzzy | EM Algorithm for Maximum Likelihood Estimation by Non-Precise Information |

EMAtools | Data Management Tools for Real-Time Monitoring/Ecological Momentary Assessment Data |

emayili | Send Email Messages |

emba | Ensemble Boolean Model Biomarker Analysis |

EMbC | Expectation-Maximization Binary Clustering |

embed | Extra Recipes for Encoding Categorical Predictors |

EmbedSOM | Fast Embedding Guided by Self-Organizing Map |

embryogrowth | Tools to Analyze the Thermal Reaction Norm of Embryo Growth |

EMC | Evolutionary Monte Carlo (EMC) algorithm |

EMCluster | EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution |

EMD | Empirical Mode Decomposition and Hilbert Spectral Analysis |

EMDANNhybrid | Ensemble Machine Learning Hybrid Model |

emdbook | Support Functions and Data for "Ecological Models and Data" |

emdi | Estimating and Mapping Disaggregated Indicators |

emdist | Earth Mover's Distance |

EMDSVRhybrid | Hybrid Machine Learning Model |

emg | Exponentially Modified Gaussian (EMG) Distribution |

emhawkes | Exponential Multivariate Hawkes Model |

emIRT | EM Algorithms for Estimating Item Response Theory Models |

EmissV | Tools for Create Emissions for Air Quality Models |

EmiStatR | Emissions and Statistics in R for Wastewater and Pollutants in Combined Sewer Systems |

EML | Read and Write Ecological Metadata Language Files |

emld | Ecological Metadata as Linked Data |

eMLEloglin | Fitting log-Linear Models in Sparse Contingency Tables |

emma | Evolutionary model-based multiresponse approach |

EMMAgeo | End-Member Modelling of Grain-Size Data |

emme2 | Read and Write to an EMME/2 databank |

emmeans | Estimated Marginal Means, aka Least-Squares Means |

EMMIXgene | A Mixture Model-Based Approach to the Clustering of Microarray Expression Data |

EMMIXmfa | Mixture Models with Component-Wise Factor Analyzers |

EMMLi | A Maximum Likelihood Approach to the Analysis of Modularity |

EMMREML | Fitting Mixed Models with Known Covariance Structures |

emoa | Evolutionary Multiobjective Optimization Algorithms |

emojifont | Emoji and Font Awesome in Graphics |

emon | Tools for Environmental and Ecological Survey Design |

emov | Eye Movement Analysis Package for Fixation and Saccade Detection |

EMP | Expected Maximum Profit Classification Performance Measure |

empichar | Evaluates the Empirical Characteristic Function for Multivariate Samples |

EmpiricalCalibration | Routines for Performing Empirical Calibration of Observational Study Estimates |

empiricalFDR.DESeq2 | Simulation-Based False Discovery Rate in RNA-Seq |

emplik | Empirical Likelihood Ratio for Censored/Truncated Data |

emplik2 | Empirical Likelihood Ratio Test for Two Samples with Censored Data |

ems | Epimed Solutions Collection for Data Editing, Analysis, and Benchmark of Health Units |

EMSaov | The Analysis of Variance with EMS |

EMSC | Extended Multiplicative Signal Correction |

EMSNM | EM Algorithm for Sigmoid Normal Model |

EMSS | Some EM-Type Estimation Methods for the Heckman Selection Model |

emstreeR | Tools for Fast Computing and Plotting Euclidean Minimum Spanning Trees |

EMT | Exact Multinomial Test: Goodness-of-Fit Test for Discrete Multivariate data |

emulator | Bayesian Emulation of Computer Programs |

emuR | Main Package of the EMU Speech Database Management System |

EMVS | The Expectation-Maximization Approach to Bayesian Variable Selection |

enc | Portable Tools for 'UTF-8' Character Data |

EncDNA | Encoding of Nucleotide Sequences into Numeric Feature Vectors |

eNchange | Ensemble Methods for Multiple Change-Point Detection |

encode | Represent Ordered Lists and Pairs as Strings |

encryptedRmd | Encrypt Html Reports Using 'Libsodium' |

encryptr | Easily Encrypt and Decrypt Data Frame/Tibble Columns or Files using RSA Public/Private Keys |

endogenous | Classical Simultaneous Equation Models |

endogMNP | R Package for Fitting Multinomial Probit Models with Endogenous Selection |

endorse | Bayesian Measurement Models for Analyzing Endorsement Experiments |

endoSwitch | Endogenous Switching Regression Models |

endtoend | Transmissions and Receptions in an End to End Network |

energy | E-Statistics: Multivariate Inference via the Energy of Data |

EnergyOnlineCPM | Distribution Free Multivariate Control Chart Based on Energy Test |

energyr | Data Published by the United States Federal Energy Regulatory Commission |

enerscape | Compute Energy Landscapes |

enetLTS | Robust and Sparse Methods for High Dimensional Linear and Logistic Regression |

english | Translate Integers into English |

EngrExpt | Data sets from "Introductory Statistics for Engineering Experimentation" |

engsoccerdata | English and European Soccer Results 1871-2016 |

ENMeval | Automated Runs and Evaluations of Ecological Niche Models |

ENMTools | Analysis of Niche Evolution using Niche and Distribution Models |

ennet | Utilities to Extract and Analyse Text Data from the Emergency Nutrition Network Forum |

enpls | Ensemble Partial Least Squares Regression |

enRich | Analysis of Multiple ChIP-Seq Data |

enrichR | Provides an R Interface to 'Enrichr' |

enrichwith | Methods to Enrich R Objects with Extra Components |

EnsCat | Clustering of Categorical Data |

EnsembleBase | Extensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling |

ensembleBMA | Probabilistic Forecasting using Ensembles and Bayesian Model Averaging |

EnsembleCV | Extensible Package for Cross-Validation-Based Integration of Base Learners |

ensembleMOS | Ensemble Model Output Statistics |

EnsemblePCReg | Extensible Package for Principal-Component-Regression-Based Heterogeneous Ensemble Meta-Learning |

EnsemblePenReg | Extensible Classes and Methods for Penalized-Regression-Based Integration of Base Learners |

ensemblepp | Ensemble Postprocessing Data Sets |

ensembleR | Ensemble Models in R |

ensembleTax | Ensemble Taxonomic Assignments of Amplicon Sequencing Data |

ensr | Elastic Net SearcheR |

ensurer | Ensure Values at Runtime |

entcn | Translate English Words into Chinese Words |

entropart | Entropy Partitioning to Measure Diversity |

entropy | Estimation of Entropy, Mutual Information and Related Quantities |

EntropyEstimation | Estimation of Entropy and Related Quantities |

EntropyExplorer | Tools for Exploring Differential Shannon Entropy, Differential Coefficient of Variation and Differential Expression |

EntropyMCMC | MCMC Simulation and Convergence Evaluation using Entropy and Kullback-Leibler Divergence Estimation |

entrymodels | Estimate Entry Models |

envalysis | Miscellaneous Functions for Environmental Analyses |

EnvCpt | Detection of Structural Changes in Climate and Environment Time Series |

envDocument | Document the R Working Environment |

enveomics.R | Various Utilities for Microbial Genomics and Metagenomics |

EnvExpInd | Environmental Exposure on the Individual Level |

envi | Environmental Interpolation using Spatial Kernel Density Estimation |

enviGCMS | GC/LC-MS Data Analysis for Environmental Science |

enviPat | Isotope Pattern, Profile and Centroid Calculation for Mass Spectrometry |

enviPick | Peak Picking for High Resolution Mass Spectrometry Data |

envir | Manage R Environments Better |

envirem | Generation of ENVIREM Variables |

EnviroPRA | Environmental Probabilistic Risk Assessment Tools |

EnviroStat | Statistical Analysis of Environmental Space-Time Processes |

envlpaster | Enveloping the Aster Model |

envnames | Keep Track of User-Defined Environment Names |

EnvNicheR | Niche Estimation |

envoutliers | Methods for Identification of Outliers in Environmental Data |

EnvStats | Package for Environmental Statistics, Including US EPA Guidance |

eoffice | Export or Graph and Tables to 'Microsoft' Office and Import Figures and Tables |

eoR | Data Management Package (Exposure and Occurrence Data in R) |

epade | Easy Plots |

epandist | Statistical Functions for the Censored and Uncensored Epanechnikov Distribution |

epanetReader | Read Epanet Files into R |

epca | Exploratory Principal Component Analysis |

ePCR | Ensemble Penalized Cox Regression for Survival Prediction |

EPGMr | Implementation of the Everglades Phosphorus Gradient Model |

eph | Argentina's Permanent Household Survey Data and Manipulation Utilities |

Epi | Statistical Analysis in Epidemiology |

epibasix | Elementary Epidemiological Functions for Epidemiology and Biostatistics |

epicontacts | Handling, Visualisation and Analysis of Epidemiological Contacts |

EpiContactTrace | Epidemiological Tool for Contact Tracing |

EpiCurve | Plot an Epidemic Curve |

epidata | Tools to Retrieve Economic Policy Institute Data Library Extracts |

epiDisplay | Epidemiological Data Display Package |

EpiDynamics | Dynamic Models in Epidemiology |

EpiEstim | Estimate Time Varying Reproduction Numbers from Epidemic Curves |

epifitter | Analysis and Simulation of Plant Disease Progress Curves |

epiflows | Predicting Disease Spread from Flow Data |

epigraphdb | Interface Package for the 'EpiGraphDB' Platform |

epiGWAS | Robust Methods for Epistasis Detection |

EpiILM | Spatial and Network Based Individual Level Models for Epidemics |

EpiILMCT | Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics |

epikit | Miscellaneous Tools for the 'R4Epis' Project |

epimdr | Functions and Data for "Epidemics: Models and Data in R" |

EpiModel | Mathematical Modeling of Infectious Disease Dynamics |

epinet | Epidemic/Network-Related Tools |

epinetr | Epistatic Network Modelling with Forward-Time Simulation |

EpiNow2 | Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters |

epiphy | Analysis of Plant Disease Epidemics |

epiR | Tools for the Analysis of Epidemiological Data |

EpiReport | Epidemiological Report |

episcan | Scan Pairwise Epistasis |

episensr | Basic Sensitivity Analysis of Epidemiological Results |

EpiSignalDetection | Signal Detection Analysis |

episplineDensity | Density Estimation with Soft Information by Exponential Epi-splines |

epistasis | Detecting Epistatic Selection with Partially Observed Genotype Data |

EpiStats | Tools for Epidemiologists |

EpistemicGameTheory | Constructing an Epistemic Model for the Games with Two Players |

epitab | Flexible Contingency Tables for Epidemiology |

epitools | Epidemiology Tools |

epitrix | Small Helpers and Tricks for Epidemics Analysis |

epitweetr | Early Detection of Public Health Threats from Twitter Data |

Eplot | Plotting longitudinal series |

eplusr | A Toolkit for Using Whole Building Simulation Program 'EnergyPlus' |

eply | Apply a Function Over Expressions |

epoc | Endogenous Perturbation Analysis of Cancer |

eponge | Keep Your Environment Clean |

epos | Epilepsy Ontologies' Similarities |

epr | Easy Polynomial Regression |

epsiwal | Exact Post Selection Inference with Applications to the Lasso |

EPT | Ensemble Patch Transform, Visualization and Decomposition |

epubr | Read EPUB File Metadata and Text |

epwshiftr | Create Future 'EnergyPlus' Weather Files using 'CMIP6' Data |

EPX | Ensemble of Phalanxes |

epxToR | Import 'Epidata' XML Files '.epx' |

eq5d | Methods for Analysing 'EQ-5D' Data and Calculating 'EQ-5D' Index Scores |

EQL | Extended-Quasi-Likelihood-Function (EQL) |

eqs2lavaan | EQS Output Conversion to lavaan Functions |

eqtl | Tools for analyzing eQTL experiments: A complementary to Karl Broman's 'qtl' package for genome-wide analysis |

equalCovs | Testing the Equality of Two Covariance Matrices |

Equalden.HD | Testing the Equality of a High Dimensional Set of Densities |

equaltestMI | Examine Measurement Invariance via Equivalence Testing and Projection Method |

equatags | Equations to 'XML' |

equate | Observed-Score Linking and Equating |

equateIRT | IRT Equating Methods |

equateMultiple | Equating of Multiple Forms |

equatiomatic | Transform Models into 'LaTeX' Equations |

EquiSurv | Modeling, Confidence Intervals and Equivalence of Survival Curves |

equivalence | Provides Tests and Graphics for Assessing Tests of Equivalence |

equivalenceTest | Equivalence Test for the Means of Two Normal Distributions |

EQUIVNONINF | Testing for Equivalence and Noninferiority |

equivUMP | Uniformly Most Powerful Invariant Tests of Equivalence |

ER | Effect + Residual Modelling |

era | Years with an Era |

erah | Automated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics |

erboost | Nonparametric Multiple Expectile Regression via ER-Boost |

ercv | Fitting Tails by the Empirical Residual Coefficient of Variation |

erer | Empirical Research in Economics with R |

ergm | Fit, Simulate and Diagnose Exponential-Family Models for Networks |

ergm.count | Fit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges |

ergm.ego | Fit, Simulate and Diagnose Exponential-Family Random Graph Models to Egocentrically Sampled Network Data |

ergm.rank | Fit, Simulate and Diagnose Exponential-Family Models for Rank-Order Relational Data |

ergm.userterms | User-specified Terms for the statnet Suite of Packages |

ergMargins | Process Analysis for Exponential Random Graph Models |

ergmclust | ERGM-Based Network Clustering |

ergmharris | Local Health Department network data set |

ergmito | Exponential Random Graph Models for Small Networks |

erify | Check Arguments and Generate Readable Error Messages |

eRm | Extended Rasch Modeling |

ERP | Significance Analysis of Event-Related Potentials Data |

erp.easy | Event-Related Potential (ERP) Data Exploration Made Easy |

erpR | Event-related potentials (ERP) analysis, graphics and utility functions |

err | Customizable Object Sensitive Messages |

erratum | Handle Error and Warning Messages |

errint | Builds Error Intervals |

errorist | Automatically Search Errors or Warnings |

errorizer | Function Errorizer |

errorlocate | Locate Errors with Validation Rules |

errors | Uncertainty Propagation for R Vectors |

errum | Exploratory Reduced Reparameterized Unified Model Estimation |

ERSA | Exploratory Regression 'Shiny' App |

eRTG3D | Empirically Informed Random Trajectory Generation in 3-D |

ES | Edge Selection |

es.dif | Compute Effect Sizes of the Difference |

esaBcv | Estimate Number of Latent Factors and Factor Matrix for Factor Analysis |

esaddle | Extended Empirical Saddlepoint Density Approximations |

esaps | Indicators of Electoral Systems and Party Systems |

esback | Expected Shortfall Backtesting |

esc | Effect Size Computation for Meta Analysis |

escalation | Modular Approach to Dose Finding Clinical Trials |

esDesign | Adaptive Enrichment Designs with Sample Size Re-Estimation |

eSDM | Ensemble Tool for Predictions from Species Distribution Models |

ESEA | ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis |

eseis | Environmental Seismology Toolbox |

ESG | A Package for Asset Projection |

eshrink | Shrinkage for Effect Estimation |

esmisc | Misc Functions of Eduard Szöcs |

esmprep | Data Preparation During and After the Use of the Experience Sampling Methodology (ESM) |

esquisse | Explore and Visualize Your Data Interactively |

esreg | Joint Quantile and Expected Shortfall Regression |

ess | Efficient Stepwise Selection in Decomposable Models |

essentials | Essential Functions not Included in Base R |

essHist | The Essential Histogram |

essurvey | Download Data from the European Social Survey on the Fly |

estatapi | R Interface to e-Stat API |

EstCRM | Calibrating Parameters for the Samejima's Continuous IRT Model |

ESTER | Efficient Sequential Testing with Evidence Ratios |

EstHer | Estimation of Heritability in High Dimensional Sparse Linear Mixed Models using Variable Selection |

estimability | Tools for Assessing Estimability of Linear Predictions |

EstimateGroupNetwork | Perform the Joint Graphical Lasso and Selects Tuning Parameters |

EstimationTools | Maximum Likelihood Estimation for Probability Functions from Data Sets |

estimatr | Fast Estimators for Design-Based Inference |

EstimDiagnostics | Diagnostic Tools and Unit Tests for Statistical Estimators |

estimraw | Estimation of Four-Fold Table Cell Frequencies (Raw Data) from Effect Size Measures |

estmeansd | Estimating the Sample Mean and Standard Deviation from Commonly Reported Quantiles in Meta-Analysis |

EstMix | Tumor Clones Percentage Estimations |

estout | Estimates Output |

estprod | Estimation of Production Functions |

EstSimPDMP | Estimation and Simulation for PDMPs |

estudy2 | An Implementation of Parametric and Nonparametric Event Study |

esvis | Visualization and Estimation of Effect Sizes |

etable | Easy Table |

ETAS | Modeling Earthquake Data Using 'ETAS' Model |

etasFLP | Mixed FLP and ML Estimation of ETAS Space-Time Point Processes for Earthquake Description |

ETC | Equivalence to control |

ether | Interaction with the 'Ethereum' Blockchain |

ethnobotanyR | Calculate Quantitative Ethnobotany Indices |

EthSEQ | Ethnicity Annotation from Whole Exome Sequencing Data |

etl | Extract-Transform-Load Framework for Medium Data |

ETLUtils | Utility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data |

etm | Empirical Transition Matrix |

etma | Epistasis Test in Meta-Analysis |

etrader | 'ETRADE' API Interface for R |

etrunct | Computes Moments of Univariate Truncated t Distribution |

eudract | Creates Safety Results Summary in XML to Upload to EudraCT |

eulerian | eulerian: A package to find eulerian paths from graphs |

eulerr | Area-Proportional Euler and Venn Diagrams with Ellipses |

Eunomia | A Standard Dataset in the OMOP Common Data Model |

eurlex | Retrieve Data on European Union Law |

europepmc | R Interface to the Europe PubMed Central RESTful Web Service |

europop | Historical Populations of European Cities, 1500-1800 |

EurosarcBayes | Bayesian Single Arm Sample Size Calculation Software |

eurostat | Tools for Eurostat Open Data |

eva | Extreme Value Analysis with Goodness-of-Fit Testing |

evabic | Evaluation of Binary Classifiers |

EvalEst | Dynamic Systems Estimation - Extensions |

evalITR | Evaluating Individualized Treatment Rules |

evaluate | Parsing and Evaluation Tools that Provide More Details than the Default |

EvaluateCore | Quality Evaluation of Core Collections |

EvaluationMeasures | Collection of Model Evaluation Measure Functions |

evaluator | Quantified Risk Assessment Toolkit |

EValue | Sensitivity Analyses for Unmeasured Confounding and Other Biases in Observational Studies and Meta-Analyses |

Evapotranspiration | Modelling Actual, Potential and Reference Crop Evapotranspiration |

evclass | Evidential Distance-Based Classification |

evclust | Evidential Clustering |

EvCombR | Evidence Combination in R |

evd | Functions for Extreme Value Distributions |

evdbayes | Bayesian Analysis in Extreme Value Theory |

event | Event History Procedures and Models |

eventdataR | Event Data Repository |

EventDetectGUI | Graphical User Interface for the 'EventDetectR' Package |

EventDetectR | Event Detection Framework |

eventglm | Regression Models for Event History Outcomes |

eventInterval | Sequential Event Interval Analysis |

eventr | Create Event Based Data Architectures |

events | Store and manipulate event data |

eventstream | Streaming Events and their Early Classification |

eventstudies | Event Study Analysis |

EventStudy | Event Study Analysis |

evgam | Generalised Additive Extreme Value Models |

evian | Evidential Analysis of Genetic Association Data |

evidence | Analysis of Scientific Evidence Using Bayesian and Likelihood Methods |

evidenceFactors | Reporting Tools for Sensitivity Analysis of Evidence Factors in Observational Studies |

EvidenceSynthesis | Synthesizing Causal Evidence in a Distributed Research Network |

evident | Evidence Factors in Observational Studies |

EviewsR | 'Eviews' Knit-Engine |

evir | Extreme Values in R |

evmix | Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation |

evobiR | Comparative and Population Genetic Analyses |

evolqg | Tools for Evolutionary Quantitative Genetics |

EvolutionaryGames | Important Concepts of Evolutionary Game Theory |

evolvability | Calculation of Evolvability Parameters |

Evomorph | Evolutionary Morphometric Simulation |

evoper | Evolutionary Parameter Estimation for 'Repast Simphony' Models |

EvoRAG | Evolutionary Rates Across Gradients |

evt0 | Mean of order p, peaks over random threshold Hill and high quantile estimates |

evtclass | Extreme Value Theory for Open Set Classification - GPD and GEV Classifiers |

evtree | Evolutionary Learning of Globally Optimal Trees |

EW | Edgeworth Expansion |

EWGoF | Goodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions |

ewoc | Escalation with Overdose Control |

EWOC2 | Escalation with Overdose Control using 2 Drug Combinations |

EwR | Econometrics with R |

EWS | Early Warning System |

Exact | Unconditional Exact Test |

exact2x2 | Exact Tests and Confidence Intervals for 2x2 Tables |

exactci | Exact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases |

ExactCIdiff | Inductive Confidence Intervals for the difference between two proportions |

exactextractr | Fast Extraction from Raster Datasets using Polygons |

exactLoglinTest | Monte Carlo Exact Tests for Log-linear models |

exactmeta | Exact fixed effect meta analysis |

ExactMultinom | Multinomial Goodness-of-Fit Tests |

exactRankTests | Exact Distributions for Rank and Permutation Tests |

ExamPAData | Data Sets for Predictive Analytics Exam |

exampletestr | Help for Writing Unit Tests Based on Function Examples |

exams | Automatic Generation of Exams in R |

exams.mylearn | Question Generation in the 'MyLearn' XML Format |

exams2sakai | Automatic Generation of Exams in R for 'Sakai' |

ExceedanceTools | Confidence regions for exceedance sets and contour lines |

exceedProb | Confidence Intervals for Exceedance Probability |

excel.link | Convenient Data Exchange with Microsoft Excel |

ExcelFunctionsR | Imports Excel Functions to R |

excelR | A Wrapper of the 'JavaScript' Library 'jExcel' |

excelstrippr | Extracts Tabular Data from Excel Reports |

excerptr | Excerpt Structuring Comments from Your Code File and Set a Table of Contents |

ExcessMass | Excess Mass Calculation and Plots |

exCon | Interactive Exploration of Contour Data |

excursions | Excursion Sets and Contour Credibility Regions for Random Fields |

exdex | Estimation of the Extremal Index |

ExhaustiveSearch | A Fast and Scalable Exhaustive Feature Selection Framework |

exif | Read EXIF Metadata from JPEGs |

exifr | EXIF Image Data in R |

exiftoolr | ExifTool Functionality from R |

ExomeDepth | Calls Copy Number Variants from Targeted Sequence Data |

exp2flux | Convert Gene EXPression Data to FBA FLUXes |

ExPanDaR | Explore Your Data Interactively |

expandFunctions | Feature Matrix Builder |

expands | Expanding Ploidy and Allele-Frequency on Nested Subpopulations |

ExpDE | Modular Differential Evolution for Experimenting with Operators |

ExpDes | Experimental Designs Package |

ExpDes.pt | Pacote Experimental Designs (Portugues) |

experDesign | Design Experiments for Batches |

experiment | R Package for Designing and Analyzing Randomized Experiments |

expert | Modeling without data using expert opinion |

ExpertChoice | Design of Discrete Choice and Conjoint Analysis |

expint | Exponential Integral and Incomplete Gamma Function |

ExplainPrediction | Explanation of Predictions for Classification and Regression Models |

explor | Interactive Interfaces for Results Exploration |

explore | Simplifies Exploratory Data Analysis |

exploreR | Tools for Quickly Exploring Data |

expm | Matrix Exponential, Log, 'etc' |

expose | Multiple Effect Estimation of Chemicals in Environmental Epidemiology |

ExPosition | Exploratory Analysis with the Singular Value Decomposition |

expperm | Computing Expectations and Marginal Likelihoods for Permutations |

ExpRep | Experiment Repetitions |

expSBM | An Exponential Stochastic Block Model for Interaction Lengths |

expsmooth | Data Sets from "Forecasting with Exponential Smoothing" |

expss | Tables, Labels and Some Useful Functions from Spreadsheets and 'SPSS' Statistics |

exptest | Tests for Exponentiality |

exreport | Fast, Reliable and Elegant Reproducible Research |

EXRQ | Extreme Regression of Quantiles |

exsic | Convenience Functions for Botanists to Create Specimens Indices |

ExtDist | Extending the Range of Functions for Probability Distributions |

extdplyr | Data Manipulation Extensions of 'Dplyr' and 'Tidyr' |

extendedFamily | Additional Families for Generalized Linear Models |

exteriorMatch | Constructs the Exterior Match from Two Matched Control Groups |

extfunnel | Additional Funnel Plot Augmentations |

extlasso | Maximum penalized likelihood estimation with extended lasso penalty |

ExtMallows | An Extended Mallows Model and Its Hierarchical Version for Ranked Data Aggregation |

extraBinomial | Extra-binomial approach for pooled sequencing data |

ExtractTrainData | Extract Values from Raster |

extraDistr | Additional Univariate and Multivariate Distributions |

extrafont | Tools for using fonts |

extrafontdb | Package for holding the database for the extrafont package |

extraoperators | Extra Binary Relational and Logical Operators |

extras | Helper Functions for Bayesian Analyses |

extraterrestrial | Astrobiology Equations Estimating Extraterrestrial Life |

extraTrees | Extremely Randomized Trees (ExtraTrees) Method for Classification and Regression |

extRatum | Summary Statistics for Geospatial Features |

extRC | Extended RC Models for Contingency Tables |

ExtremalDep | Extremal Dependence Models |

ExtremeBounds | Extreme Bounds Analysis (EBA) |

extremefit | Estimation of Extreme Conditional Quantiles and Probabilities |

extremeIndex | Forecast Verification for Extreme Events |

ExtremeRisks | Extreme Risk Measures |

extRemes | Extreme Value Analysis |

extremeStat | Extreme Value Statistics and Quantile Estimation |

extremevalues | Univariate Outlier Detection |

extremis | Statistics of Extremes |

extremogram | Estimation of Extreme Value Dependence for Time Series Data |

extWeibQuant | Estimate Lower Extreme Quantile with the Censored Weibull MLE and Censored Weibull Mixture |

exuber | Econometric Analysis of Explosive Time Series |

eye | Analysis of Eye Data |

eyedata | Open Source Ophthalmic Data Sets Curated for R |

eyelinker | Import ASC Files from EyeLink Eye Trackers |

eyeRead | Prepare/Analyse Eye Tracking Data for Reading |

eyetracking | Eyetracking Helper Functions |

eyeTrackR | Organising and Analysing Eye-Tracking Data |

ez | Easy Analysis and Visualization of Factorial Experiments |

ezcox | Easily Process a Batch of Cox Models |

ezCutoffs | Fit Measure Cutoffs in SEM |

ezec | Easy Interface to Effective Concentration Calculations |

ezEDA | Task Oriented Interface for Exploratory Data Analysis |

ezglm | selects significant non-additive interaction between two variables using fast GLM implementation |

ezknitr | Avoid the Typical Working Directory Pain When Using 'knitr' |

ezmmek | Easy Michaelis-Menten Enzyme Kinetics |

ezpickr | Easy Data Import Using GUI File Picker |

ezplot | Functions for Common Chart Types |

ezr | Easy Use of R via Shiny App for Basic Analyses of Experimental Data |

ezsim | provide an easy to use framework to conduct simulation |

EZtune | Tunes AdaBoost, Elastic Net, Support Vector Machines, and Gradient Boosting Machines |

fabCI | FAB Confidence Intervals |

FABInference | FAB p-Values and Confidence Intervals |

fabisearch | Change Point Detection in High-Dimensional Time Series Networks |

fable | Forecasting Models for Tidy Time Series |

fable.prophet | Prophet Modelling Interface for 'fable' |

fabletools | Core Tools for Packages in the 'fable' Framework |

fabMix | Overfitting Bayesian Mixtures of Factor Analyzers with Parsimonious Covariance and Unknown Number of Components |

fabricatr | Imagine Your Data Before You Collect It |

fabricerin | Create Easily Canvas in 'shiny' and 'RMarkdown' Documents |

face | Fast Covariance Estimation for Sparse Functional Data |

facerec | An Interface for Face Recognition |

facilitation | A C++ Framework for Plant-Plant Interaction IBMs |

FacPad | Bayesian Sparse Factor Analysis model for the inference of pathways responsive to drug treatment |

FactMixtAnalysis | Factor Mixture Analysis with covariates |

FACTMLE | Maximum Likelihood Factor Analysis |

FactoClass | Combination of Factorial Methods and Cluster Analysis |

factoextra | Extract and Visualize the Results of Multivariate Data Analyses |

FactoInvestigate | Automatic Description of Factorial Analysis |

FactoMineR | Multivariate Exploratory Data Analysis and Data Mining |

factoptd | Factorial Optimal Designs for Two-Colour cDNA Microarray Experiments |

factor.switching | Post-Processing MCMC Outputs of Bayesian Factor Analytic Models |

FactorAssumptions | Set of Assumptions for Factor and Principal Component Analysis |

FactorCopula | Factor Copula Models for Mixed Continuous and Discrete Data |

factorcpt | Simultaneous Change-Point and Factor Analysis |

factorEx | Design and Analysis for Factorial Experiments |

factorial2x2 | Design and Analysis of a 2x2 Factorial Trial |

factorMerger | The Merging Path Plot |

factorplot | Graphical Presentation of Simple Contrasts |

factorQR | Bayesian quantile regression factor models |

FactorsR | Identification of the Factors Affecting Species Richness |

factorstochvol | Bayesian Estimation of (Sparse) Latent Factor Stochastic Volatility Models |

factory | Build Function Factories |

Factoshiny | Perform Factorial Analysis from 'FactoMineR' with a Shiny Application |

factset.analyticsapi.engines | 'FactSet' Engines API Client |

factset.protobuf.stach | 'FactSet' 'STACH' Library |

factualR | thin wrapper for the Factual.com server API |

fad | Factor Analysis for Data |

FADA | Variable Selection for Supervised Classification in High Dimension |

FAdist | Distributions that are Sometimes Used in Hydrology |

Fahrmeir | Data from the Book "Multivariate Statistical Modelling Based on Generalized Linear Models", First Edition, by Ludwig Fahrmeir and Gerhard Tutz |

fail | File Abstraction Interface Layer (FAIL) |

fairadapt | Fair Data Adaptation with Quantile Preservation |

fairml | Fair Models in Machine Learning |

fairmodels | Flexible Tool for Bias Detection, Visualization, and Mitigation |

fairness | Algorithmic Fairness Metrics |

fairsubset | Choose Representative Subsets |

faisalconjoint | Faisal Conjoint Model: A New Approach to Conjoint Analysis |

fakemake | Mock the Unix Make Utility |

fakeR | Simulates Data from a Data Frame of Different Variable Types |

falcon | Finding Allele-Specific Copy Number in Next-Generation Sequencing Data |

falconx | Finding Allele-Specific Copy Number in Whole-Exome Sequencing Data |

fam.recrisk | Familial Recurrence Risk |

fam2r | From 'Familias' to R |

fame | Interface for FAME Time Series Database |

FamEvent | Family Age-at-Onset Data Simulation and Penetrance Estimation |

Familias | Probabilities for Pedigrees Given DNA Data |

FAMILY | A Convex Formulation for Modeling Interactions with Strong Heredity |

FamilyRank | Algorithm for Ranking Predictors Using Graphical Domain Knowledge |

FAmle | Maximum Likelihood and Bayesian Estimation of Univariate Probability Distributions |

FAMoS | A Flexible Algorithm for Model Selection |

famSKATRC | Family Sequence Kernel Association Test for Rare and Common Variants |

FAMT | Factor Analysis for Multiple Testing (FAMT) : simultaneous tests under dependence in high-dimensional data |

fanc | Penalized Likelihood Factor Analysis via Nonconvex Penalty |

fANCOVA | Nonparametric Analysis of Covariance |

fancycut | A Fancy Version of 'base::cut' |

fanovaGraph | Building Kriging Models from FANOVA Graphs |

fanplot | Visualisation of Sequential Probability Distributions Using Fan Charts |

fansi | ANSI Control Sequence Aware String Functions |

FAOSTAT | Download Data from the FAOSTAT Database |

faoutlier | Influential Case Detection Methods for Factor Analysis and Structural Equation Models |

faq | Create FAQ Page |

far | Modelization for Functional AutoRegressive Processes |

faraway | Functions and Datasets for Books by Julian Faraway |

FARDEEP | Fast and Robust Deconvolution of Tumor Infiltrating Lymphocyte from Expression Profiles using Least Trimmed Squares |

farff | A Faster 'ARFF' File Reader and Writer |

FarmSelect | Factor Adjusted Robust Model Selection |

FarmTest | Factor-Adjusted Robust Multiple Testing |

farrell | Interactive Interface to Data Envelopment Analysis Modeling |

farver | High Performance Colour Space Manipulation |

FASeg | Joint Segmentation of Correlated Time Series |

fAsianOptions | Rmetrics - EBM and Asian Option Valuation |

fasjem | A Fast and Scalable Joint Estimator for Learning Multiple Related Sparse Gaussian Graphical Models |

fAssets | Rmetrics - Analysing and Modelling Financial Assets |

fasstr | Analyze, Summarize, and Visualize Daily Streamflow Data |

fasta | Fast Adaptive Shrinkage/Thresholding Algorithm |

fastAdaboost | a Fast Implementation of Adaboost |

fastai | Interface to 'fastai' |

FastBandChol | Fast Estimation of a Covariance Matrix by Banding the Cholesky Factor |

fastclime | A Fast Solver for Parameterized LP Problems, Constrained L1 Minimization Approach to Sparse Precision Matrix Estimation and Dantzig Selector |

fastcluster | Fast Hierarchical Clustering Routines for R and 'Python' |

fastcmh | Significant Interval Discovery with Categorical Covariates |

fastcmprsk | Fine-Gray Regression via Forward-Backward Scan |

fastcox | Lasso and Elastic-Net Penalized Cox's Regression in High Dimensions Models using the Cocktail Algorithm |

FastCUB | Fast EM and Best-Subset Selection for CUB Models for Rating Data |

fastdigest | Fast, Low Memory-Footprint Digests of R Objects |

fastDummies | Fast Creation of Dummy (Binary) Columns and Rows from Categorical Variables |

fasteraster | Raster Image Processing and Vector Recognition |

fasterElasticNet | An Amazing Fast Way to Fit Elastic Net |

fasterize | Fast Polygon to Raster Conversion |

FastGaSP | Fast and Exact Computation of Gaussian Stochastic Process |

fastGHQuad | Fast 'Rcpp' Implementation of Gauss-Hermite Quadrature |

fastglm | Fast and Stable Fitting of Generalized Linear Models using 'RcppEigen' |

FastGP | Efficiently Using Gaussian Processes with Rcpp and RcppEigen |

fastGraph | Fast Drawing and Shading of Graphs of Statistical Distributions |

FastHCS | Robust Algorithm for Principal Component Analysis |

fastHICA | Hierarchical Independent Component Analysis: a Multi-Scale Sparse Non-Orthogonal Data-Driven Basis |

fastICA | FastICA Algorithms to Perform ICA and Projection Pursuit |

fastJT | Efficient Jonckheere-Terpstra Test Statistics |

FastKM | A Fast Multiple-Kernel Method Based on a Low-Rank Approximation |

fastkmedoids | Faster K-Medoids Clustering Algorithms: FastPAM, FastCLARA, FastCLARANS |

FastKNN | Fast k-Nearest Neighbors |

fastLink | Fast Probabilistic Record Linkage with Missing Data |

fastlogitME | Basic Marginal Effects for Logit Models |

fastlogranktest | A Fast Way to Calculate the p-Value of One or Multiple Log-Rank-Tests |

FastLZeroSpikeInference | Fast Nonconvex Deconvolution of Calcium Imaging Data |

fastM | Fast Computation of Multivariate M-Estimators |

fastmap | Fast Data Structures |

fastmaRching | Fast Marching Method for Modelling Evolving Boundaries |

fastmatch | Fast match() function |

fastmatrix | Fast Computation of some Matrices Useful in Statistics |

fastmit | Fast Mutual Information Based Independence Test |

fastNaiveBayes | Extremely Fast Implementation of a Naive Bayes Classifier |

fastnet | Large-Scale Social Network Analysis |

FastPCS | FastPCS Robust Fit of Multivariate Location and Scatter |

fastpos | Finds the Critical Sequential Point of Stability for a Pearson Correlation |

fastpseudo | Fast Pseudo Observations |

fastqcr | Quality Control of Sequencing Data |

fastR2 | Foundations and Applications of Statistics Using R (2nd Edition) |

FastRCS | Fits the FastRCS Robust Multivariable Linear Regression Model |

fastRG | Sample Generalized Random Dot Product Graphs in Linear Time |

fastrmodels | Models for the 'nflfastR' Package |

FastRWeb | Fast Interactive Framework for Web Scripting Using R |

FastSF | Fast Structural Filtering |

fastshap | Fast Approximate Shapley Values |

fastSOM | Fast Calculation of Spillover Measures |

fastStat | Faster for Statistic Work |

fastTextR | An Interface to the 'fastText' Library |

fasttime | Fast Utility Function for Time Parsing and Conversion |

fat2Lpoly | Two-Locus Family-Based Association Test with Polytomous Outcome |

FateID | Quantification of Fate Bias in Multipotent Progenitors |

FatTailsR | Kiener Distributions and Fat Tails in Finance |

FaultTree | Fault Trees for Risk and Reliability Analysis |

faux | Simulation for Factorial Designs |

fauxnaif | Convert Values to NA |

fauxpas | HTTP Error Helpers |

faviconPlease | Find the URL to the 'Favicon' for a Website |

favnums | A Dataset of Favourite Numbers |

FAwR | Functions and Datasets for "Forest Analytics with R" |

fbar | An Extensible Approach to Flux Balance Analysis |

fBasics | Rmetrics - Markets and Basic Statistics |

fbati | Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families |

FBFsearch | Algorithm for Searching the Space of Gaussian Directed Acyclic Graph Models Through Moment Fractional Bayes Factors |

FBN | FISH Based Normalization and Copy Number inference of SNP microarray data |

fBonds | Rmetrics - Pricing and Evaluating Bonds |

fbRads | Analyzing and Managing Facebook Ads from R |

fbRanks | Association Football (Soccer) Ranking via Poisson Regression |

fbroc | Fast Algorithms to Bootstrap Receiver Operating Characteristics Curves |

fbst | The Full Bayesian Evidence Test, Full Bayesian Significance Test and the e-Value |

fc | Standard Evaluation-Based Multivariate Function Composition |

fcaR | Formal Concept Analysis |

fcci | Feldman-Cousins Confidence Intervals |

fcd | Fused Community Detection |

fCertificates | Basics of Certificates and Structured Products Valuation |

FCGR | Fatigue Crack Growth in Reliability |

FcircSEC | Full Length Circular RNA Sequence Extraction and Classification |

fclust | Fuzzy Clustering |

fcm | Inference of Fuzzy Cognitive Maps (FCMs) |

FCMapper | Fuzzy Cognitive Mapping |

fCopulae | Rmetrics - Bivariate Dependence Structures with Copulae |

FCPS | Fundamental Clustering Problems Suite |

fcr | Functional Concurrent Regression for Sparse Data |

fcros | A Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations |

FCSlib | A Collection of Fluorescence Fluctuation Spectroscopy Analysis Methods |

fctbases | Functional Bases |

fcuk | The Ultimate Helper for Clumsy Fingers |

FD | Measuring functional diversity (FD) from multiple traits, and other tools for functional ecology |

fda | Functional Data Analysis |

fda.usc | Functional Data Analysis and Utilities for Statistical Computing |

fdaACF | Autocorrelation Function for Functional Time Series |

fdadensity | Functional Data Analysis for Density Functions by Transformation to a Hilbert Space |

fdakma | Functional Data Analysis: K-Mean Alignment |

fdaMixed | Functional Data Analysis in a Mixed Model Framework |

fdANOVA | Analysis of Variance for Univariate and Multivariate Functional Data |

fdaoutlier | Outlier Detection Tools for Functional Data Analysis |

fdapace | Functional Data Analysis and Empirical Dynamics |

fdaPDE | Statistical Analysis of Functional and Spatial Data, Based on Regression with PDE Regularization |

fdaPOIFD | Partially Observed Integrated Functional Depth |

fdasrvf | Elastic Functional Data Analysis |

fdatest | Interval Testing Procedure for Functional Data |

FDboost | Boosting Functional Regression Models |

fdcov | Analysis of Covariance Operators |

fddm | Fast Implementation of the Diffusion Decision Model |

fdistr | Frequency Distribution Tables |

fdm2id | Data Mining and R Programming for Beginners |

fDMA | Dynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes |

fdq | Forest Data Quality |

fdrci | Permutation-Based FDR Point and Confidence Interval Estimation |

fdrDiscreteNull | False Discovery Rate Procedures Under Discrete and Heterogeneous Null Distributions |

FDRestimation | Estimate, Plot, and Summarize False Discovery Rates |

FDRreg | False discovery rate regression |

FDRsampsize | Compute Sample Size that Meets Requirements for Average Power and FDR |

FDRSeg | FDR-Control in Multiscale Change-Point Segmentation |

fdrtool | Estimation of (Local) False Discovery Rates and Higher Criticism |

fds | Functional Data Sets |

fdth | Frequency Distribution Tables, Histograms and Polygons |

FDX | False Discovery Exceedance Controlling Multiple Testing Procedures |

FeaLect | Scores Features for Feature Selection |

feamiR | Classification and Feature Selection for microRNA/mRNA Interactions |

feasts | Feature Extraction and Statistics for Time Series |

feather | R Bindings to the Feather 'API' |

feature | Local Inferential Feature Significance for Multivariate Kernel Density Estimation |

featureCorMatrix | Measurement Level Independent Feature Correlation Matrix |

featurefinder | Feature Finder |

featureflag | Turn Features On and Off using Feature Flags |

FeatureHashing | Creates a Model Matrix via Feature Hashing with a Formula Interface |

FeatureImpCluster | Feature Importance for Partitional Clustering |

features | Feature Extraction for Discretely-Sampled Functional Data |

featuretoolsR | Interact with the 'Python' Module 'Featuretools' |

featurizer | Some Helper Functions that Help Create Features from Data |

fec16 | Data Package for the 2016 United States Federal Elections |

fechner | Fechnerian Scaling of Discrete Object Sets |

FedData | Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources |

federalregister | Client Package for the U.S. Federal Register API |

fedregs | Text Analysis of the US Code of Federal Regulations |

FeedbackTS | Analysis of Feedback in Time Series |

feedeR | Read RSS, Atom and RDF Feeds |

feisr | Estimating Fixed Effects Individual Slope Models |

fellov | Feasible Ellipse Overlap |

felp | Functional Help for Functions, Objects, and Packages |

fence | Using Fence Methods for Model Selection |

FENmlm | Fixed Effects Nonlinear Maximum Likelihood Models |

FEprovideR | Fixed Effects Logistic Model with High-Dimensional Parameters |

FER | Financial Engineering in R |

fergm | Estimation and Fit Assessment of Frailty Exponential Random Graph Models |

fermicatsR | Fermi Large Area Telescope Catalogs |

ferrn | Facilitate Exploration of touRR optimisatioN |

FertBoot | Fertilizer Response Curve Analysis by Bootstrapping Residuals |

FESta | Fishing Effort Standardisation |

fExoticOptions | Rmetrics - Pricing and Evaluating Exotic Option |

fExpressCertificates | Structured Products Valuation for ExpressCertificates/Autocallables |

fExtremes | Rmetrics - Modelling Extreme Events in Finance |

ff | Memory-Efficient Storage of Large Data on Disk and Fast Access Functions |

ffbase | Basic Statistical Functions for Package 'ff' |

FFD | Freedom from Disease |

FFdownload | Download Data from Kenneth French's Website |

FField | Force field simulation for a set of points |

ffmanova | Fifty-Fifty MANOVA |

ffmetadata | Access to Fragile Families Metadata |

ffscrapr | API Client for Fantasy Football League Platforms |

ffstream | Forgetting Factor Methods for Change Detection in Streaming Data |

fftw | Fast FFT and DCT Based on the FFTW Library |

fftwtools | Wrapper for 'FFTW3' Includes: One-Dimensional, Two-Dimensional, Three-Dimensional, and Multivariate Transforms |

fgac | Generalized Archimedean Copula |

FGalgorithm | Flury and Gautschi algorithms |

fGarch | Rmetrics - Autoregressive Conditional Heteroskedastic Modelling |

fgdr | Utilities for Fundamental Geo-Spatial Data |

fgeo | Analyze Forest Diversity and Dynamics |

fgeo.analyze | Analyze ForestGEO Data |

fgeo.plot | Plot ForestGEO Data |

fgeo.tool | Import and Manipulate ForestGEO Data |

fgeo.x | Access Small ForestGEO Datasets For Examples |

fgm | Partial Separability and Functional Gaussian Graphical Models |

Fgmutils | Forest Growth Model Utilities |

fgof | Fast Goodness-of-fit Test |

fgpt | Floating Grid Permutation Technique |

FGSG | Feature Grouping and Selection Over an Undirected Graph |

fgui | Function GUI |

FHDI | Fractional Hot Deck and Fully Efficient Fractional Imputation |

fhidata | Structural Data for Norway |

fhircrackr | Handling HL7 FHIR Resources in R |

fHMM | Fitting Hidden Markov Models to Financial Data |

FHtest | Tests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class |

FI | Provide functions for forest inventory calculations |

fiberLD | Fiber Length Determination |

fic | Focused Information Criteria for Model Comparison |

fICA | Classical, Reloaded and Adaptive FastICA Algorithms |

fieldRS | Remote Sensing Field Work Tools |

fields | Tools for Spatial Data |

FieldSim | Random Fields (and Bridges) Simulations |

fiery | A Lightweight and Flexible Web Framework |

filehash | Simple Key-Value Database |

filehashSQLite | Simple key-value database using SQLite |

filelock | Portable File Locking |

filematrix | File-Backed Matrix Class with Convenient Read and Write Access |

filenamer | Easy Management of File Names |

files | Effective File Navigation from the R Console |

filesstrings | Handy File and String Manipulation |

FILEST | Fine-Level Structure Simulator |

filling | Matrix Completion, Imputation, and Inpainting Methods |

fillr | Fill Missing Values in Vectors |

fImport | Rmetrics - Importing Economic and Financial Data |

finalfit | Quickly Create Elegant Regression Results Tables and Plots when Modelling |

FinAna | Financial Analysis and Regression Diagnostic Analysis |

FinancialInstrument | Financial Instrument Model Infrastructure and Meta-Data |

FinancialMath | Financial Mathematics for Actuaries |

FinAsym | Classifies implicit trading activity from market quotes and computes the probability of informed trading |

finbif | Interface for the 'Finnish Biodiversity Information Facility' API |

FinCal | Time Value of Money, Time Series Analysis and Computational Finance |

finch | Parse Darwin Core Files |

FinCovRegularization | Covariance Matrix Estimation and Regularization for Finance |

FindAllRoots | Find all root(s) of the equation and Find root(s) of the equation by dichotomy |

findInFiles | Find Pattern in Files |

FindIt | Finding Heterogeneous Treatment Effects |

findpython | Functions to Find an Acceptable Python Binary |

findR | Find Code Snippets, R Scripts, R Markdown, PDF and Text Files with Pattern Matching |

findviews | A View Generator for Multidimensional Data |

FinePop | Fine-Scale Population Analysis |

FinePop2 | Fine-Scale Population Analysis (Rewrite for Gene-Trait-Environment Interaction Analysis) |

finetune | Additional Functions for Model Tuning |

fingerprint | Functions to Operate on Binary Fingerprint Data |

fingerPro | Sediment Source Fingerprinting |

finiteruinprob | Computation of the Probability of Ruin Within a Finite Time Horizon |

finity | Test for Finiteness of Moments in a Distribution |

finreportr | Financial Data from U.S. Securities and Exchange Commission |

FinTS | Companion to Tsay (2005) Analysis of Financial Time Series |

fipe | Access to Average Purchase Price of Vehicles in Brazil |

fipp | Induced Priors in Bayesian Mixture Models |

FiRE | Finder of Rare Entities (FiRE) |

firebase | Integrates 'Google Firebase' Authentication Method with 'Shiny' |

firebehavioR | Prediction of Wildland Fire Behavior and Hazard |

FiSh | Fisher-Shannon Method |

fishbc | Fishes of British Columbia |

fishdata | A Small Collection of Fish Population Datasets |

FisherEM | The FisherEM Algorithm to Simultaneously Cluster and Visualize High-Dimensional Data |

fisheyeR | Fisheye and Hyperbolic-space-alike Interactive Visualization Tools in R |

FisHiCal | Iterative FISH-based Calibration of Hi-C Data |

fishkirkko2015 | Dataset of Measurements of Fish Species at Kirkkojarvi Lake, Finland |

fishmethods | Fishery Science Methods and Models |

fishMod | Fits Poisson-Sum-of-Gammas GLMs, Tweedie GLMs, and Delta Log-Normal Models |

fishmove | Prediction of Fish Movement Parameters |

FishResp | Analytical Tool for Aquatic Respirometry |

fishtree | Interface to the Fish Tree of Life API |

fishualize | Color Palettes Based on Fish Species |

FisPro | Fuzzy Inference System Design and Optimization |

FIT | Transcriptomic Dynamics Models in Field Conditions |

fit.models | Compare Fitted Models |

FitAR | Subset AR Model Fitting |

FitARMA | Fit ARMA or ARIMA Using Fast MLE Algorithm |

fitbitScraper | Scrapes Data from Fitbit |

fitConic | Fit Data to Any Conic Section |

fitdc | Garmin FIT File Decoder |

fitdistrplus | Help to Fit of a Parametric Distribution to Non-Censored or Censored Data |

fitDRC | Fitting Density Ratio Classes |

fitHeavyTail | Mean and Covariance Matrix Estimation under Heavy Tails |

fitODBOD | Modeling Over Dispersed Binomial Outcome Data Using BMD and ABD |

fitplc | Fit Hydraulic Vulnerability Curves |

fitPoly | Genotype Calling for Bi-Allelic Marker Assays |

FITSio | FITS (Flexible Image Transport System) Utilities |

fitteR | Fit Hundreds of Theoretical Distributions to Empirical Data |

fitTetra | fitTetra is an R package for assigning tetraploid genotype scores |

FitUltD | Fit Univariate Mixed and Usual Distributions |

fitur | Fit Univariate Distributions |

fitzRoy | Easily Scrape and Process AFL Data |

fivethirtyeight | Data and Code Behind the Stories and Interactives at 'FiveThirtyEight' |

FixedPoint | Algorithms for Finding Fixed Point Vectors of Functions |

fixedTimeEvents | The Distribution of Distances Between Discrete Events in Fixed Time |

fixerapi | An R Client for the "Fixer.io" Currency API |

fixest | Fast Fixed-Effects Estimations |

FixSeqMTP | Fixed Sequence Multiple Testing Procedures |

fizzbuzzR | Fizz Buzz Implementation |

FKF | Fast Kalman Filter |

FKF.SP | Fast Kalman Filtering Through Sequential Processing |

FKSUM | Fast Kernel Sums |

flacco | Feature-Based Landscape Analysis of Continuous and Constrained Optimization Problems |

flagr | Implementation of Flag Aggregation |

flair | Highlight, Annotate, and Format your R Source Code |

flam | Fits Piecewise Constant Models with Data-Adaptive Knots |

FLAME | Interpretable Matching for Causal Inference |

flamingos | Functional Latent Data Models for Clustering Heterogeneous Curves ('FLaMingos') |

flan | FLuctuation ANalysis on Mutation Models |

flare | Family of Lasso Regression |

flars | Functional LARS |

flashCard | Create a Flash Card |

flashClust | Implementation of optimal hierarchical clustering |

flashlight | Shed Light on Black Box Machine Learning Models |

flatr | Transforms Contingency Tables to Data Frames, and Analyses Them |

flattabler | Obtaining a Flat Table from Pivot Tables |

flatxml | Tools for Working with XML Files as R Dataframes |

flexclust | Flexible Cluster Algorithms |

flexCWM | Flexible Cluster-Weighted Modeling |

flexdashboard | R Markdown Format for Flexible Dashboards |

FlexDir | Tools to Work with the Flexible Dirichlet Distribution |

FlexGAM | Generalized Additive Models with Flexible Response Functions |

flexiblas | 'FlexiBLAS' API Interface |

flexmet | Flexible Latent Trait Metrics using the Filtered Monotonic Polynomial Item Response Model |

flexmix | Flexible Mixture Modeling |

flexmixNL | Finite Mixture Modeling of Generalized Nonlinear Models |

FlexParamCurve | Tools to Fit Flexible Parametric Curves |

flexpolyline | Flexible Polyline Encoding |

FlexReg | Regression Models for Bounded Responses |

flexrsurv | Flexible Relative Survival Analysis |

FlexScan | Flexible Scan Statistics |

flexsurv | Flexible Parametric Survival and Multi-State Models |

flexsurvcure | Flexible Parametric Cure Models |

flextable | Functions for Tabular Reporting |

FlickrAPI | Access to Flickr API |

flifo | Don't Get Stuck with Stacks in R |

flightplanning | UAV Flight Planning |

flightplot | Plotting Flight Paths on Maps |

FLightR | Reconstruct Animal Paths from Solar Geolocation Loggers Data |

flip | Multivariate Permutation Tests |

flipdownr | Implement a Countdown in 'RMarkdown' Documents and 'shiny' Applications |

flippant | Dithionite Scramblase Assay Analysis |

flipr | Flexible Inference via Permutations in R |

flipscores | Robust Score Testing in GLMs, by Sign-Flip Contributions |

FLLat | Fused Lasso Latent Feature Model |

float | 32-Bit Floats |

flobr | Convert Files to and from Binary Objects (BLOBs) |

flock | Process Synchronization Using File Locks |

flood | Statistical Methods for the (Regional) Analysis of Flood Frequency |

flora | Tools for Interacting with the Brazilian Flora 2020 |

florestal | Results for Forest Inventories |

flower | Tools for characterizing flowering traits |

flowfield | Forecasts future values of a univariate time series |

flowr | Streamlining Design and Deployment of Complex Workflows |

FlowRegEnvCost | The Environmental Costs of Flow Regulation |

FlowScreen | Daily Streamflow Trend and Change Point Screening |

FLR | Fuzzy Logic Rule Classifier |

flsa | Path Algorithm for the General Fused Lasso Signal Approximator |

FLSSS | Mining Rigs for Specialized Subset Sum, Multi-Subset Sum, Multidimensional Subset Sum, Multidimensional Knapsack, Generalized Assignment Problems |

FluMoDL | Influenza-Attributable Mortality with Distributed-Lag Models |

fluoSurv | Estimate Insect Survival from Fluorescence Data |

fluspect | Fluspect-B |

flux | Flux rate calculation from dynamic closed chamber measurements |

fluxweb | Estimate Energy Fluxes in Food Webs |

flying | Simulation of Bird Flight Range |

FlyingR | Simulation of Bird Flight Range |

fma | Data Sets from "Forecasting: Methods and Applications" by Makridakis, Wheelwright & Hyndman (1998) |

FMAdist | Frequentist Model Averaging Distribution |

fmbasics | Financial Market Building Blocks |

FMC | Factorial Experiments with Minimum Level Changes |

FMCCSD | Efficient Estimation of Clustered Current Status Data |

fmcmc | A friendly MCMC framework |

fmdates | Financial Market Date Calculations |

FME | A Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability and Monte Carlo Analysis |

fmerPack | Tools of Heterogeneity Pursuit via Finite Mixture Effects Model |

fmf | Fast Class Noise Detector with Multi-Factor-Based Learning |

FMM | Rhythmic Patterns Modeling by FMM Models |

FMP | Filtered Monotonic Polynomial IRT Models |

fmpcloudr | R Access to the 'FMP Cloud' and 'Financial Modeling Prep' API |

FMradio | Factor Modeling for Radiomics Data |

fmri | Analysis of fMRI Experiments |

fmriqa | Functional MRI Quality Assurance Routines |

fmsb | Functions for Medical Statistics Book with some Demographic Data |

FMsmsnReg | Regression Models with Finite Mixtures of Skew Heavy-Tailed Errors |

FMStable | Finite Moment Stable Distributions |

fmtr | Easily Apply Formats to Data |

fMultivar | Rmetrics - Analysing and Modeling Multivariate Financial Return Distributions |

FNN | Fast Nearest Neighbor Search Algorithms and Applications |

fNonlinear | Rmetrics - Nonlinear and Chaotic Time Series Modelling |

FOCI | Feature Ordering by Conditional Independence |

focusedMDS | Focused, Interactive Multidimensional Scaling |

foghorn | Summarize CRAN Check Results in the Terminal |

foieGras | Fit Continuous-Time State-Space and Latent Variable Models for Quality Control of Argos Satellite (and Other) Telemetry Data and for Estimating Movement Behaviour |

folderfun | Creates and Manages Folder Functions for Portable Large-Scale R Analysis |

folio | Datasets for Teaching Archaeology and Paleontology |

fontawesome | Easily Work with 'Font Awesome' Icons |

fontBitstreamVera | Fonts with 'Bitstream Vera Fonts' License |

fontcm | Computer Modern font for use with extrafont package |

fontHind | Additional 'ggplot2' Themes Using 'Hind' Fonts |

fontLiberation | Liberation Fonts |

fontMPlus | Additional 'ggplot2' Themes Using 'M+' Fonts |

fontquiver | Set of Installed Fonts |

foodingraph | Food Network Inference and Visualization |

foodweb | visualisation and analysis of food web networks |

foolbox | Function Manipulation Toolbox |

footballpenaltiesBL | Penalties in the German Men's Football Bundesliga |

footprint | Calculate Air Travel Emissions |

fOptions | Rmetrics - Pricing and Evaluating Basic Options |

foqat | Field Observation Quick Analysis Toolkit |

forams | Foraminifera and Community Ecology Analyses |

forcats | Tools for Working with Categorical Variables (Factors) |

foreach | Provides Foreach Looping Construct |

ForeCA | Forecastable Component Analysis |

forecast | Forecasting Functions for Time Series and Linear Models |

ForecastComb | Forecast Combination Methods |

ForecastCombinations | Forecast Combinations |

forecastHybrid | Convenient Functions for Ensemble Time Series Forecasts |

forecastML | Time Series Forecasting with Machine Learning Methods |

forecastSNSTS | Forecasting for Stationary and Non-Stationary Time Series |

ForecastTB | Test Bench for the Comparison of Forecast Methods |

FoReco | Point Forecast Reconciliation |

forecTheta | Forecasting Time Series by Theta Models |

foreign | Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ... |

forensic | Statistical Methods in Forensic Genetics |

forensim | Statistical tools for the interpretation of forensic DNA mixtures |

foreSIGHT | Systems Insights from Generation of Hydroclimatic Timeseries |

forestControl | Approximate False Positive Rate Control in Selection Frequency for Random Forest |

ForestDisc | Forest Discretization |

forestecology | Methods and Data for Forest Ecology Model Fitting and Assessment |

forestError | A Unified Framework for Random Forest Prediction Error Estimation |

ForestFit | Statistical Modelling for Plant Size Distributions |

forestHES | Forest Health Evaluation System at the Forest Stand Level in China |

forestinventory | Design-Based Global and Small-Area Estimations for Multiphase Forest Inventories |

forestmangr | Forest Mensuration and Management |

forestmodel | Forest Plots from Regression Models |

forestplot | Advanced Forest Plot Using 'grid' Graphics |

forestr | Ecosystem and Canopy Structural Complexity Metrics from LiDAR |

forestRK | Implements the Forest-R.K. Algorithm for Classification Problems |

forestry | Reshape Data Tree |

foretell | Projecting Customer Retention Based on Fader and Hardie Probability Models |

forge | Casting Values into Shape |

forImage | Foraminiferal Image Analysis and Test Measurement |

ForImp | Imputation of Missing Values Through a Forward Imputation Algorithm |

ForIT | Functions from the 2nd Italian Forest Inventory (INFC) |

formatR | Format R Code Automatically |

formattable | Create 'Formattable' Data Structures |

Formula | Extended Model Formulas |

formula.tools | Programmatic Utilities for Manipulating Formulas, Expressions, Calls, Assignments and Other R Objects |

formulaic | Dynamic Generation and Quality Checks of Formula Objects |

formulops | Mathematical Operations on R Formula |

forplo | Flexible Forest Plots |

forrel | Forensic Pedigree Analysis and Relatedness Inference |

FORTLS | Automatic Processing of TLS Point Cloud Data for Forestry Purposes |

fortunes | R Fortunes |

forward | Robust Analysis using Forward Search |

forwards | Data from Surveys Conducted by Forwards |

ForwardSearch | Forward Search using asymptotic theory |

fossil | Palaeoecological and Palaeogeographical Analysis Tools |

FossilSim | Simulation of Fossil and Taxonomy Data |

foster | Forest Structure Extrapolation with R |

foto | Fourier Transform Textural Ordination |

FourgameteP | FourGamete Test |

fourierin | Computes Numeric Fourier Integrals |

fourPNO | Bayesian 4 Parameter Item Response Model |

FourScores | A Game for Human vs. Human or Human vs. AI |

fpa | Spatio-Temporal Fixation Pattern Analysis |

fpc | Flexible Procedures for Clustering |

fpca | Restricted MLE for Functional Principal Components Analysis |

FPCA2D | Two Dimensional Functional Principal Component Analysis |

FPCA3D | Three Dimensional Functional Component Analysis |

fpCompare | Reliable Comparison of Floating Point Numbers |

FPDclustering | PD-Clustering and Factor PD-Clustering |

fpeek | Check Text Files Content at a Glance |

fpest | Estimating Finite Population Total |

fplot | Automatic Distribution Graphs Using Formulas |

fplyr | Apply Functions to Blocks of Files |

fpmoutliers | Frequent Pattern Mining Outliers |

fpop | Segmentation using Optimal Partitioning and Function Pruning |

fPortfolio | Rmetrics - Portfolio Selection and Optimization |

fpow | Computing the noncentrality parameter of the noncentral F distribution |

fpp | Data for "Forecasting: principles and practice" |

fpp2 | Data for "Forecasting: Principles and Practice" (2nd Edition) |

fpp3 | Data for "Forecasting: Principles and Practice" (3rd Edition) |

fptdApprox | Approximation of First-Passage-Time Densities for Diffusion Processes |

FPV | Testing Hypotheses via Fuzzy P-Value in Fuzzy Environment |

fracdiff | Fractionally Differenced ARIMA aka ARFIMA(P,d,q) Models |

fracprolif | Fraction Proliferation via a Quiescent Growth Model |

fractaldim | Estimation of fractal dimensions |

FractalParameterEstimation | Simulation and Parameter Estimation of Randomized Sierpinski Carpets using the p-p-p-q-Model |

fractD | Estimation of Fractal Dimension of a Black Area in 2D and 3D (Slices) Images |

FRACTION | Numeric number into fraction |

fractional | Vulgar Fractions in R |

fracture | Convert Decimals to Fractions |

fragility | Assessing and Visualizing Fragility of Clinical Results with Binary Outcomes |

Fragman | Fragment Analysis in R |

frailtyEM | Fitting Frailty Models with the EM Algorithm |

frailtyHL | Frailty Models via Hierarchical Likelihood |

frailtypack | General Frailty Models: Shared, Joint and Nested Frailty Models with Prediction; Evaluation of Failure-Time Surrogate Endpoints |

frailtySurv | General Semiparametric Shared Frailty Model |

frair | Tools for Functional Response Analysis |

frambgrowth | Simulation of the Growth of Framboidal and Sunflower Pyrite |

Frames2 | Estimation in Dual Frame Surveys |

franc | Detect the Language of Text |

FRAPO | Financial Risk Modelling and Portfolio Optimisation with R |

frapplot | Automatic Data Processing and Visualization for FRAP |

frbs | Fuzzy Rule-Based Systems for Classification and Regression Tasks |

FRCC | Fast Regularized Canonical Correlation Analysis |

frechet | Statistical Analysis for Random Objects and Non-Euclidean Data |

fredr | An R Client for the 'FRED' API |

freealg | The Free Algebra |

freedom | Demonstration of Disease Freedom (DDF) |

freegroup | The Free Group |

FreeSortR | Free Sorting Data Analysis |

freesurfer | Wrapper Functions for 'Freesurfer' |

freesurferformats | Read and Write 'FreeSurfer' Neuroimaging File Formats |

FREEtree | Tree Method for High Dimensional Longitudinal Data |

freetypeharfbuzz | Deterministic Computation of Text Box Metrics |

fRegression | Rmetrics - Regression Based Decision and Prediction |

frenchCurve | Generate Open or Closed Interpolating Curves |

FREQ | FREQ: Estimate population size from capture frequencies |

freqdist | Frequency Distribution |

freqdom | Frequency Domain Based Analysis: Dynamic PCA |

freqdom.fda | Functional Time Series: Dynamic Functional Principal Components |

freqparcoord | Novel Methods for Parallel Coordinates |

FreqProf | Frequency Profiles Computing and Plotting |

freqtables | Make Quick Descriptive Tables for Categorical Variables |

frequency | Easy Frequency Tables |

frequencyConnectedness | Spectral Decomposition of Connectedness Measures |

frequentdirections | Implementation of Frequent-Directions Algorithm for Efficient Matrix Sketching |

FRESA.CAD | Feature Selection Algorithms for Computer Aided Diagnosis |

fresh | Create Custom 'Bootstrap' Themes to Use in 'Shiny' |

FrF2 | Fractional Factorial Designs with 2-Level Factors |

FrF2.catlg128 | Catalogues of resolution IV 128 run 2-level fractional factorials up to 33 factors that do have 5-letter words |

friends | The Entire Transcript from Friends in Tidy Format |

fritools | Utilities for the Forest Research Institute of the State Baden-Wuerttemberg |

FRK | Fixed Rank Kriging |

fRLR | Fit Repeated Linear Regressions |

frm | Regression Analysis of Fractional Responses |

frmhet | Regression Analysis of Fractional Responses Under Unobserved Heterogeneity |

frmpd | Regression Analysis of Panel Fractional Responses |

frmqa | The Generalized Hyperbolic Distribution, Related Distributions and Their Applications in Finance |

fromo | Fast Robust Moments |

frontier | Stochastic Frontier Analysis |

frontiles | Partial Frontier Efficiency Analysis |

frost | Prediction of Minimum Temperature for Frost Forecasting in Agriculture |

frostr | R API to MET Norway's 'Frost' API |

fruclimadapt | Evaluation Tools for Assessing Climate Adaptation of Fruit Tree Species |

fs | Cross-Platform File System Operations Based on 'libuv' |

FSA | Simple Fisheries Stock Assessment Methods |

FSAdata | Data to Support Fish Stock Assessment ('FSA') Package |

fsbrain | Managing and Visualizing Brain Surface Data |

fscaret | Automated Feature Selection from 'caret' |

FSDAM | Forward Stepwise Deep Autoencoder-Based Monotone NLDR |

fsdaR | Robust Data Analysis Through Monitoring and Dynamic Visualization |

FSelector | Selecting Attributes |

FSelectorRcpp | 'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support |

fsia | Import and Analysis of OMR Data from FormScanner |

FSinR | Feature Selection |

FSInteract | Fast Searches for Interactions |

FSK2R | An Interface Between the 'FSK-ML' Standard and 'R' |

fslr | Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB') |

FSM | Finite Selection Model |

fsMTS | Feature Selection for Multivariate Time Series |

FSMUMI | Imputation of Time Series Based on Fuzzy Logic |

fsn | Rosenthal's Fail Safe Number and Related Functions |

fso | Fuzzy Set Ordination |

fspe | Estimating the Number of Factors in EFA with Out-of-Sample Prediction Errors |

fSRM | Social Relations Analyses with Roles ("Family SRM") |

fssemR | Fused Sparse Structural Equation Models to Jointly Infer Gene Regulatory Network |

FSSF | Generate Fully-Sequential Space-Filling Designs Inside a Unit Hypercube |

fst | Lightning Fast Serialization of Data Frames |

Fstability | Calculate Feature Stability |

fstcore | R Bindings to the 'Fstlib' Library |

fsthet | Fst-Heterozygosity Smoothed Quantiles |

FSTpackage | Unified Sequence-Based Association Tests Allowing for Multiple Functional Annotation Scores |

ftDK | A Wrapper for the API of the Danish Parliament |

ftExtra | Extensions for 'Flextable' |

ftnonpar | Features and Strings for Nonparametric Regression |

fTrading | Rmetrics - Trading and Rebalancing Financial Instruments |

ftrCOOL | Feature Extraction from Biological Sequences |

fts | R Interface to 'tslib' (a Time Series Library in C++) |

ftsa | Functional Time Series Analysis |

ftsspec | Spectral Density Estimation and Comparison for Functional Time Series |

fuel | Framework for Unified Estimation in Lognormal Models |

fueleconomy | EPA Fuel Economy Data |

fugeR | FUzzy GEnetic, a machine learning algorithm to construct prediction model based on fuzzy logic |

fugue | Sensitivity Analysis Optimized for Matched Sets of Varied Sizes |

fullfact | Full Factorial Breeding Analysis |

fullROC | Plot Full ROC Curves using Eyewitness Lineup Data |

fulltext | Full Text of 'Scholarly' Articles Across Many Data Sources |

fun | Use R for Fun |

func2vis | Clean and Visualize Over Expression Results from 'ConsensusPathDB' |

FunCC | Functional Cheng and Church Bi-Clustering |

funcharts | Functional Control Charts |

funchir | Convenience Functions by Michael Chirico |

FunChisq | Model-Free Functional Chi-Squared and Exact Tests |

FunCluster | Functional Profiling of Microarray Expression Data |

FuncMap | Hive Plots of R Package Function Calls |

FuncNN | Functional Neural Networks |

functClust | Functional Clustering of Redundant Components of a System |

functional | Curry, Compose, and other higher-order functions |

functiondepends | Find Functions and their Dependencies |

functools | Functional Programming in R |

funData | An S4 Class for Functional Data |

fundiversity | Easy Computation of Alpha Functional Diversity Indices |

funest | Functional Ensemble Survival Tree for Dynamic Prediction |

funFEM | Clustering in the Discriminative Functional Subspace |

fungible | Psychometric Functions from the Waller Lab |

funGp | Gaussian Process Models for Scalar and Functional Inputs |

funHDDC | Univariate and Multivariate Model-Based Clustering in Group-Specific Functional Subspaces |

funique | A Faster Unique Function |

fUnitRoots | Rmetrics - Modelling Trends and Unit Roots |

funLBM | Model-Based Co-Clustering of Functional Data |

funModeling | Exploratory Data Analysis and Data Preparation Tool-Box |

funneljoin | Time-Based Joins to Analyze Sequences of Events |

FunnelPlotR | Funnel Plots for Comparing Institutional Performance |

funnelR | Funnel Plots for Proportion Data |

funprog | Functional Programming |

funr | Simple Utility Providing Terminal Access to all R Functions |

funrar | Functional Rarity Indices Computation |

funreg | Functional Regression for Irregularly Timed Data |

FUNTA | Functional Tangential Angle Pseudo-Depth |

funtimes | Functions for Time Series Analysis |

FunWithNumbers | Fun with Fractions and Number Sequences |

furniture | Furniture for Quantitative Scientists |

furrr | Apply Mapping Functions in Parallel using Futures |

fusedest | Block Splitting Algorithm for Estimation with Fused Penalty Functions |

fuser | Fused Lasso for High-Dimensional Regression over Groups |

fusionchartsR | Embedding 'FusionCharts Javascript' Library in R |

fusionclust | Clustering and Feature Screening using L1 Fusion Penalty |

FusionLearn | Fusion Learning |

futile.logger | A Logging Utility for R |

futile.options | Futile Options Management |

futile.paradigm | A framework for working in a functional programming paradigm in R |

futility | Interim Analysis of Operational Futility in Randomized Trials with Time-to-Event Endpoints and Fixed Follow-Up |

future | Unified Parallel and Distributed Processing in R for Everyone |

future.apply | Apply Function to Elements in Parallel using Futures |

future.batchtools | A Future API for Parallel and Distributed Processing using 'batchtools' |

future.callr | A Future API for Parallel Processing using 'callr' |

future.tests | Test Suite for 'Future' API Backends |

futureheatwaves | Find, Characterize, and Explore Extreme Events in Climate Projections |

fuzzr | Fuzz-Test R Functions |

Fuzzy.p.value | Computing Fuzzy p-Value |

FuzzyAHP | (Fuzzy) AHP Calculation |

fuzzyFDR | Exact calculation of fuzzy decision rules for multiple testing |

fuzzyforest | Fuzzy Forests |

fuzzyjoin | Join Tables Together on Inexact Matching |

FuzzyLP | Fuzzy Linear Programming |

FuzzyMCDM | Multi-Criteria Decision Making Methods for Fuzzy Data |

FuzzyNumbers | Tools to Deal with Fuzzy Numbers |

FuzzyNumbers.Ext.2 | Apply Two Fuzzy Numbers on a Monotone Function |

FuzzyQ | Fuzzy Quantification of Common and Rare Species |

FuzzyR | Fuzzy Logic Toolkit for R |

fuzzyRankTests | Fuzzy Rank Tests and Confidence Intervals |

fuzzyreg | Fuzzy Linear Regression |

fuzzySim | Fuzzy Similarity in Species Distributions |

FuzzyStatProb | Fuzzy Stationary Probabilities from a Sequence of Observations of an Unknown Markov Chain |

FuzzyStatTra | Statistical Methods for Trapezoidal Fuzzy Numbers |

FuzzySTs | Fuzzy Statistical Tools |

FuzzyToolkitUoN | Type 1 Fuzzy Logic Toolkit |

fuzzywuzzyR | Fuzzy String Matching |

FWDselect | Selecting Variables in Regression Models |

fwi.fbp | Fire Weather Index System and Fire Behaviour Prediction System Calculations |

fwildclusterboot | Fast Wild Cluster Bootstrap Inference for Linear Regression Models |

fwsim | Fisher-Wright Population Simulation |

fxregime | Exchange Rate Regime Analysis |

fxTWAPLS | An Improved Version of WA-PLS |

fy | Utilities for Financial Years |

g.data | Delayed-Data Packages |

G1DBN | A package performing Dynamic Bayesian Network inference |

g2f | Find and Fill Gaps in Metabolic Networks |

G2Sd | Grain-Size Statistics and Description of Sediment |

g3viz | Interactively Visualize Genetic Mutation Data using a Lollipop-Diagram |

GA | Genetic Algorithms |

GAabbreviate | Abbreviating Items Measures using Genetic Algorithms |

GABi | Framework for Generalized Subspace Pattern Mining |

GACFF | Genetic Similarity in User-Based Collaborative Filtering |

GAD | GAD: Analysis of variance from general principles |

GADAG | A Genetic Algorithm for Learning Directed Acyclic Graphs |

gadget2 | Gadget is the Globally-Applicable Area Disaggregated General Ecosystem Toolbox |

GaDiFPT | First Passage Time Simulation for Gaussian Diffusion Processes |

GADMTools | Easy Use of 'GADM' Maps |

gafit | Genetic Algorithm for Curve Fitting |

gaiah | Genetic and Isotopic Assignment Accounting for Habitat Suitability |

gainML | Machine Learning-Based Analysis of Potential Power Gain from Passive Device Installation on Wind Turbine Generators |

gains | Lift (Gains) Tables and Charts |

GAIPE | Graphical Extension with Accuracy in Parameter Estimation (GAIPE) |

galah | Atlas of Living Australia (ALA) Data and Resources in R |

GALLO | Genomic Annotation in Livestock for Positional Candidate LOci |

galts | Genetic Algorithms and C-Steps Based LTS (Least Trimmed Squares) Estimation |

galvanizer | Interface to Galvanize 'Highbond' Internal Audit Software |

gam | Generalized Additive Models |

gama | Genetic Approach to Maximize Clustering Criterion |

gamair | Data for 'GAMs: An Introduction with R' |

gambin | Fit the Gambin Model to Species Abundance Distributions |

gamboostLSS | Boosting Methods for 'GAMLSS' |

gamboostMSM | Estimating multistate models using gamboost() |

gamclass | Functions and Data for a Course on Modern Regression and Classification |

gamCopula | Generalized Additive Models for Bivariate Conditional Dependence Structures and Vine Copulas |

GAMens | Applies GAMbag, GAMrsm and GAMens Ensemble Classifiers for Binary Classification |

gameofthrones | Palettes Inspired in the TV Show "Game of Thrones" |

games | Statistical Estimation of Game-Theoretic Models |

gamesGA | Genetic Algorithm for Sequential Symmetric Games |

GameTheory | Cooperative Game Theory |

GameTheoryAllocation | Tools for Calculating Allocations in Game Theory |

gamlr | Gamma Lasso Regression |

gamlss | Generalised Additive Models for Location Scale and Shape |

gamlss.add | Extra Additive Terms for Generalized Additive Models for Location Scale and Shape |

gamlss.cens | Fitting an Interval Response Variable Using ‘gamlss.family’ Distributions |

gamlss.countKinf | Generating and Fitting K-Inflated 'discrete gamlss.family' Distributions |

gamlss.data | Data for Generalised Additive Models for Location Scale and Shape |

gamlss.demo | Demos for GAMLSS |

gamlss.dist | Distributions for Generalized Additive Models for Location Scale and Shape |

gamlss.foreach | Parallel Computations for Distributional Regression |

gamlss.inf | Fitting Mixed (Inflated and Adjusted) Distributions |

gamlss.lasso | Extra Lasso-Type Additive Terms for GAMLSS |

gamlss.mx | Fitting Mixture Distributions with GAMLSS |

gamlss.nl | Fitting non linear parametric GAMLSS models |

gamlss.spatial | Spatial Terms in Generalized Additive Models for Location Scale and Shape Models |

gamlss.tr | Generating and Fitting Truncated ‘gamlss.family’ Distributions |

gamlssbssn | Bimodal Skew Symmetric Normal Distribution |

gamm4 | Generalized Additive Mixed Models using 'mgcv' and 'lme4' |

gamm4.test | Comparing Nonlinear Curves and Surface Estimations by Semiparametric Methods |

gamma | Dose Rate Estimation from in-Situ Gamma-Ray Spectrometry Measurements |

Gammareg | Classic Gamma Regression: Joint Modeling of Mean and Shape Parameters |

gammSlice | Generalized Additive Mixed Model Analysis via Slice Sampling |

gamreg | Robust and Sparse Regression via Gamma-Divergence |

gamRR | Calculate the RR for the GAM |

gamsel | Fit Regularization Path for Generalized Additive Models |

ganalytics | Interact with 'Google Analytics' |

GANPA | Gene Association Network-Based Pathway Analysis (GANPA) |

GANPAdata | The GANPA Datasets Package |

gap | Genetic Analysis Package |

gap.datasets | Datasets for 'gap' |

GAparsimony | Searching Parsimony Models with Genetic Algorithms |

gapfill | Fill Missing Values in Satellite Data |

gapminder | Data from Gapminder |

GARCHIto | Class of GARCH-Ito Models |

garchmodels | The 'Tidymodels' Extension for GARCH Models |

garchx | Flexible and Robust GARCH-X Modelling |

GARCOM | Gene and Region Counting of Mutations ("GARCOM") |

gargle | Utilities for Working with Google APIs |

gargoyle | An Event-Based Mechanism for 'Shiny' |

garma | Fitting and Forecasting Gegenbauer ARMA Time Series Models |

garray | Generalized Array Arithmetic for Ragged Arrays with Named Margins |

GAS | Generalized Autoregressive Score Models |

gaselect | Genetic Algorithm (GA) for Variable Selection from High-Dimensional Data |

gasfluxes | Greenhouse Gas Flux Calculation from Chamber Measurements |

gasper | Graph Signal Processing |

gastempt | Analyzing Gastric Emptying from MRI or 'Scintigraphy' |

gaston | Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models |

gatepoints | Easily Gate or Select Points on a Scatter Plot |

gateR | Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation |

GauPro | Gaussian Process Fitting |

gauseR | Lotka-Volterra Models for Gause's 'Struggle for Existence' |

gausscov | The Gaussian Covariate Method for Variable Selection |

gaussDiff | Difference measures for multivariate Gaussian probability density functions |

gaussfacts | The Greatest Mathematician Since Antiquity |

GaussianHMM1d | Inference, Goodness-of-Fit and Forecast for Univariate Gaussian Hidden Markov Models |

gaussplotR | Fit, Predict and Plot 2D Gaussians |

gaussquad | Collection of functions for Gaussian quadrature |

gawdis | Multi-Trait Dissimilarity with more Uniform Contributions |

gazepath | Parse Eye-Tracking Data into Fixations |

gb | Generalize Lambda Distribution and Generalized Bootstrapping |

GB2 | Generalized Beta Distribution of the Second Kind: Properties, Likelihood, Estimation |

GB2group | Estimation of the Generalised Beta Distribution of the Second Kind from Grouped Data |

GBcurves | Yield Curves of Brazil, China, and Russia |

gbeta | Generalized Beta and Beta Prime Distributions |

gbfs | Interface with Live Bikeshare Data |

GBJ | Generalized Berk-Jones Test for Set-Based Inference in Genetic Association Studies |

gbm | Generalized Boosted Regression Models |

gbm.auto | Automated Boosted Regression Tree Modelling and Mapping Suite |

gbm2sas | Convert GBM Object Trees to SAS Code |

gbp | A Bin Packing Problem Solver |

gbRd | Utilities for processing Rd objects and files |

gbs2ploidy | Inference of Ploidy from (Genotyping-by-Sequencing) GBS Data |

gbts | Hyperparameter Search for Gradient Boosted Trees |

gbutils | Simulation of Real and Complex Numbers and Small Programming Utilities |

GCAI.bias | Guided Correction Approach for Inherited bias (GCAI.bias) |

GCalcium | A Data Manipulation and Analysis Package for Calcium Indicator Data |

GCalignR | Simple Peak Alignment for Gas-Chromatography Data |

gCat | Graph-based two-sample tests for categorical data |

gcbd | 'GPU'/CPU Benchmarking in Debian-Based Systems |

GCD | Global Charcoal Database |

gcdnet | LASSO and Elastic Net (Adaptive) Penalized Least Squares, Logistic Regression, HHSVM, Squared Hinge SVM and Expectile Regression using a Fast GCD Algorithm |

gcerisk | Generalized Competing Event Model |

gcite | Google Citation Parser |

gcKrig | Analysis of Geostatistical Count Data using Gaussian Copulas |

gclm | Graphical Continuous Lyapunov Models |

gclus | Clustering Graphics |

gcmr | Gaussian Copula Marginal Regression |

gconsensus | Consensus Value Constructor |

gcookbook | Data for "R Graphics Cookbook" |

GCPM | Generalized Credit Portfolio Model |

GCSM | Implements Generic Composite Similarity Measure |

GD | Geographical Detectors for Assessing Spatial Factors |

GDAdata | Datasets for the Book Graphical Data Analysis with R |

gdalcubes | Earth Observation Data Cubes from Satellite Image Collections |

gdalUtilities | Wrappers for 'GDAL' Utilities Executables |

gdalUtils | Wrappers for the Geospatial Data Abstraction Library (GDAL) Utilities |

gdata | Various R Programming Tools for Data Manipulation |

GDAtools | A Toolbox for Geometric Data Analysis and More |

gde | GBIF Dataset Explorer |

gDefrag | Graph-Based Landscape De-Fragmentation |

GDELTtools | Download, slice, and normalize GDELT data |

gdiff | Graphical Difference Testing |

GDINA | The Generalized DINA Model Framework |

gdistance | Distances and Routes on Geographical Grids |

gdm | Generalized Dissimilarity Modeling |

gdmp | Genomic Data Management |

gdns | Tools to Work with Google's 'DNS'-over-'HTTPS' ('DoH') API |

gdpc | Generalized Dynamic Principal Components |

gds | Descriptive Statistics of Grouped Data |

gdtools | Utilities for Graphical Rendering |

gdxdt | IO for GAMS GDX Files using 'data.table' |

GE | General Equilibrium Modeling |

gear | Geostatistical Analysis in R |

GeDS | Geometrically Designed Spline Regression |

gee | Generalized Estimation Equation Solver |

GEEaSPU | Adaptive Association Tests for Multiple Phenotypes using Generalized Estimating Equations (GEE) |

geeCRT | Bias-Corrected GEE for Cluster Randomized Trials |

geecure | Marginal Proportional Hazards Mixture Cure Models with Generalized Estimating Equations |

geeM | Solve Generalized Estimating Equations |

GEEmediate | Mediation Analysis for Generalized Linear Models Using the Difference Method |

geepack | Generalized Estimating Equation Package |

geesmv | Modified Variance Estimators for Generalized Estimating Equations |

geex | An API for M-Estimation |

geigen | Calculate Generalized Eigenvalues, the Generalized Schur Decomposition and the Generalized Singular Value Decomposition of a Matrix Pair with Lapack |

geiger | Analysis of Evolutionary Diversification |

GEint | Misspecified Models for Gene-Environment Interaction |

GEInter | Robust Gene-Environment Interaction Analysis |

gelnet | Generalized Elastic Nets |

gemlog | File Conversion for 'Gem Infrasound Logger' |

gemma2 | GEMMA Multivariate Linear Mixed Model |

gems | Generalized Multistate Simulation Model |

gemtc | Network Meta-Analysis Using Bayesian Methods |

gen2stage | Generalized Two-Stage Designs for Phase II Single-Arm Studies |

gen3sis | General Engine for Eco-Evolutionary Simulations |

gen5helper | Processing 'Gen5' 2.06 Exported Data |

genalg | R Based Genetic Algorithm |

GenAlgo | Classes and Methods to Use Genetic Algorithms for Feature Selection |

genasis | Global ENvironmental ASsessment Information System (GENASIS) computational tools |

genBaRcode | Analysis and Visualization Tools for Genetic Barcode Data |

GenBinomApps | Clopper-Pearson Confidence Interval and Generalized Binomial Distribution |

gencve | General Cross Validation Engine |

gendata | Generate and Modify Synthetic Datasets |

gender | Predict Gender from Names Using Historical Data |

gendist | Generated Probability Distribution Models |

GENEAclassify | Segmentation and Classification of Accelerometer Data |

GENEAread | Package for Reading Binary Files |

GENEAsphere | Visualisation of Raw or Segmented Accelerometer Data |

GeneBook | Multi-Types Gene ID Converting/Annotating |

GeneClusterNet | Gene Expression Clustering and Gene Network |

GeneCycle | Identification of Periodically Expressed Genes |

geneExpressionFromGEO | Retrieves Gene Expression Dataset and Gene Symbols from GEO Code |

GeneF | Package for Generalized F-statistics |

geneHummus | A Pipeline to Define Gene Families in Legumes and Beyond |

geneListPie | Profiling a gene list into GOslim or KEGG function pie |

genemodel | Gene Model Plotting in R |

GeneNet | Modeling and Inferring Gene Networks |

geneNetBP | Belief Propagation in Genotype-Phenotype Networks |

genepi | Genetic Epidemiology Design and Inference |

genepop | Population Genetic Data Analysis Using Genepop |

generalCorr | Generalized Correlations and Various Causal Paths |

generalhoslem | Goodness of Fit Tests for Logistic Regression Models |

GeneralisedCovarianceMeasure | Test for Conditional Independence Based on the Generalized Covariance Measure (GCM) |

GeneralizedHyperbolic | The Generalized Hyperbolic Distribution |

GeneralizedUmatrix | Credible Visualization for Two-Dimensional Projections of Data |

GeneralOaxaca | Blinder-Oaxaca Decomposition for Generalized Linear Model |

generator | Generate Data Containing Fake Personally Identifiable Information |

generics | Common S3 Generics not Provided by Base R Methods Related to Model Fitting |

genero | Estimate Gender from Names in Spanish and Portuguese |

geneSignatureFinder | A Gene-signatures finder tools |

GenEst | Generalized Mortality Estimator |

genesysr | Genesys PGR Client |

genetics | Population Genetics |

GeneticSubsetter | Identify Favorable Subsets of Germplasm Collections |

GeNetIt | Spatial Graph-Theoretic Genetic Gravity Modelling |

GenForImp | The Forward Imputation: A Sequential Distance-Based Approach for Imputing Missing Data |

GenHMM1d | Goodness-of-Fit for Univariate Hidden Markov Models |

genie | Fast, Robust, and Outlier Resistant Hierarchical Clustering |

genieclust | The Genie++ Hierarchical Clustering Algorithm with Noise Points Detection |

genio | Genetics Input/Output Functions |

genius | Easily Access Song Lyrics from Genius.com |

geniusr | Tools for Working with the 'Genius' API |

GenKern | Functions for generating and manipulating binned kernel density estimates |

genlasso | Path Algorithm for Generalized Lasso Problems |

GENLIB | Genealogical Data Analysis |

genlogis | Generalized Logistic Distribution |

GENMETA | Implements Generalized Meta-Analysis Using Iterated Reweighted Least Squares Algorithm |

geno2proteo | Finding the DNA and Protein Sequences of Any Genomic or Proteomic Loci |

genodds | Generalized Odds Ratios |

genogeographer | Methods for Analysing Forensic Ancestry Informative Markers |

GenomeAdmixR | Simulate Admixture of Genomes |

genomeplot | 'Plot genome wide values for all chromosomes' |

genomic.autocorr | Models Dealing with Spatial Dependency in Genomic Data |

GenomicMating | Efficient Breeding by Genomic Mating |

genomicper | Circular Genomic Permutation using Gwas p-Values of Association |

GenomicTools | Collection of Tools for Genomic Data Analysis |

GenomicTools.fileHandler | File Handlers for Genomic Data Analysis |

genoPlotR | Plot Publication-Grade Gene and Genome Maps |

GenOrd | Simulation of Discrete Random Variables with Given Correlation Matrix and Marginal Distributions |

GenoScan | A Genome-Wide Scan Statistic Framework for Whole-Genome Sequence Data Analysis |

genotypeR | SNP Genotype Marker Design and Analysis |

genpathmox | Generalized Pathmox Approach Segmentation Tree Analysis |

genpwr | Power Calculations Under Genetic Model Misspecification |

genridge | Generalized Ridge Trace Plots for Ridge Regression |

GenSA | Generalized Simulated Annealing |

genscore | Generalized Score Matching Estimators |

genset | Generates Data Sets for Class Demonstrations |

gensphere | Generalized Spherical Distributions |

genSurv | Generating Multi-State Survival Data |

gensvm | A Generalized Multiclass Support Vector Machine |

GenTag | Generate Color Tag Sequences |

genTS | R Shiny App for Creating Simplified Trial Summary (TS) Domain |

GenWin | Spline Based Window Boundaries for Genomic Analyses |

geoBayes | Analysis of Geostatistical Data using Bayes and Empirical Bayes Methods |

GeoBoxplot | Geographic Box Plot |

geobr | Download Official Spatial Data Sets of Brazil |

geocacheR | Tools for Geocaching |

geodaData | Spatial Analysis Datasets for Teaching |

GeoDE | A geometrical Approach to Differential expression and gene-set enrichment |

geodetector | Stratified Heterogeneity Measure, Dominant Driving Force Detection, Interaction Relationship Investigation |

geodimension | Definition of Geographic Dimensions |

geodist | Fast, Dependency-Free Geodesic Distance Calculations |

geodiv | Methods for Calculating Gradient Surface Metrics |

geodrawr | Making Geospatial Objects |

GeodRegr | Geodesic Regression |

geoelectrics | 3D-Visualization of Geoelectric Resistivity Measurement Profiles |

geofabrik | Downloading Open Street Map Data |

geofacet | 'ggplot2' Faceting Utilities for Geographical Data |

geofd | Spatial Prediction for Function Value Data |

geofi | Access Finnish Geospatial Data |

geoFKF | Kriging Method for Spatial Functional Data |

geoGAM | Select Sparse Geoadditive Models for Spatial Prediction |

geogenr | Geomultistar Generator from American Community Survey (ACS) Geodatabases |

geogrid | Turn Geospatial Polygons into Regular or Hexagonal Grids |

geohashTools | Tools for Working with Geohashes |

geojson | Classes for 'GeoJSON' |

geojsonio | Convert Data from and to 'GeoJSON' or 'TopoJSON' |

geojsonlint | Tools for Validating 'GeoJSON' |

geojsonR | A GeoJson Processing Toolkit |

geojsonsf | GeoJSON to Simple Feature Converter |

geoknife | Web-Processing of Large Gridded Datasets |

GeoLight | Analysis of Light Based Geolocator Data |

GEOmap | Topographic and Geologic Mapping |

geomapdata | Data for topographic and Geologic Mapping |

GeomComb | (Geometric) Forecast Combination Methods |

geomedb | Functions for Fetching 'GeOMe-db' Data |

geomerge | Geospatial Data Integration |

geometa | Tools for Reading and Writing ISO/OGC Geographic Metadata |

geometr | Generate and Modify Interoperable Geometric Shapes |

geometries | Convert Between R Objects and Geometric Structures |

geometry | Mesh Generation and Surface Tessellation |

geomnet | Network Visualization in the 'ggplot2' Framework |

GeoMongo | Geospatial Queries Using 'PyMongo' |

geomorph | Geometric Morphometric Analyses of 2D/3D Landmark Data |

geomultistar | Multidimensional Queries Enriched with Geographic Data |

geonames | Interface to the "Geonames" Spatial Query Web Service |

geonapi | 'GeoNetwork' API R Interface |

geonetwork | Geographic Networks |

geophys | Geophysics, Continuum Mechanics, Gravity Modeling |

geoR | Analysis of Geostatistical Data |

GeoRange | Calculating Geographic Range from Occurrence Data |

georob | Robust Geostatistical Analysis of Spatial Data |

geos | Open Source Geometry Engine ('GEOS') R API |

geosapi | GeoServer REST API R Interface |

geoscale | Geological Time Scale Plotting |

geosed | Smallest Enclosing Disc for Latitude and Longitude Points |

geospark | Bring Local Sf to Spark |

geoSpectral | Classes and Methods for Working with Spectral Data with Space-Time Attributes |

geosphere | Spherical Trigonometry |

geospt | Geostatistical Analysis and Design of Optimal Spatial Sampling Networks |

geosptdb | Spatio-Temporal; Inverse Distance Weighting and Radial Basis Functions with Distance-Based Regression |

geostats | An Introduction to Statistics for Geoscientists |

geostatsp | Geostatistical Modelling with Likelihood and Bayes |

GeoTcgaData | Processing various types of data on GEO and TCGA |

geotech | Geotechnical Engineering |

geotools | Geo tools |

geotoolsR | Tools to Improve the Use of Geostatistic |

geotopbricks | An R Plug-in for the Distributed Hydrological Model GEOtop |

geoTS | Methods for Handling and Analyzing Time Series of Satellite Images |

geouy | Geographic Information of Uruguay |

geoviz | Elevation and GPS Data Visualisation |

geozoo | Zoo of Geometric Objects |

gepaf | Google Encoded Polyline Algorithm Format |

gerbil | Generalized Efficient Regression-Based Imputation with Latent Processes |

GermaParl | Download and Augment the Corpus of Plenary Protocols of the German Bundestag |

GerminaR | Indices and Graphics for Assess Seed Germination Process |

germinationmetrics | Seed Germination Indices and Curve Fitting |

gert | Simple Git Client for R |

gesca | Generalized Structured Component Analysis (GSCA) |

GESE | Gene-Based Segregation Test |

gesisdata | Reproducible Data Retrieval from the GESIS Data Archive |

gestalt | Tools for Making and Combining Functions |

gestate | Generalised Survival Trial Assessment Tool Environment |

GESTr | Gene Expression State Transformation |

gesttools | General Purpose G-Estimation for End of Study or Time-Varying Outcomes |

GET | Global Envelopes |

getable | Fetching Tabular Data "Onload" in Compiled R Markdown HTML Documents |

GetBCBData | Imports Datasets from BCB (Central Bank of Brazil) using Its Official API |

getCRUCLdata | 'CRU' 'CL' v. 2.0 Climatology Client |

GetDFPData | Reading Annual Financial Reports from Bovespa's DFP, FRE and FCA System |

GetDFPData2 | Reading Annual and Quarterly Financial Reports from B3 |

getDTeval | Translating Coding Statements using get() and eval() for Improved Run-Time Coding Efficiency |

GetFREData | Reading FRE Corporate Data of Public Traded Companies from B3 |

gethr | Access to Ethereum-Based Blockchains Through Geth Nodes |

getlandsat | Get Landsat 8 Data from Amazon Public Data Sets |

GetLattesData | Reading Bibliometric Data from Lattes Platform |

getMet | Get Meteorological Data for Hydrologic Models |

getmstatistic | Quantifying Systematic Heterogeneity in Meta-Analysis |

getopt | C-Like 'getopt' Behavior |

GetoptLong | Parsing Command-Line Arguments and Simple Variable Interpolation |

getPass | Masked User Input |

getProxy | Get Free Proxy IP and Port |

GetQuandlData | Fast and Cached Import of Data from 'Quandl' Using the 'json API' |

GetR | GetR: Calculate Guttman error trees in R |

gets | General-to-Specific (GETS) Modelling and Indicator Saturation Methods |

getspres | SPRE Statistics for Exploring Heterogeneity in Meta-Analysis |

GetTDData | Get Data for Brazilian Bonds (Tesouro Direto) |

gettz | Get the Timezone Information |

GEVACO | Joint Test of Gene and GxE Interactions via Varying Coefficients |

GEVcdn | GEV Conditional Density Estimation Network |

GExMap | A visual, intuitive, easy to use software giving access to a new type of information buried into your microarray data |

gexp | Generator of Experiments |

geysertimes | Geyser Data from GeyserTimes.org |

GFA | Group Factor Analysis |

gfboost | Gradient-Free Gradient Boosting |

gfcanalysis | Tools for Working with Hansen et al. Global Forest Change Dataset |

GFD | Tests for General Factorial Designs |

GFE | Gross Flows Estimation under Complex Surveys |

gfer | Green Finance and Environmental Risk |

GFGM.copula | Generalized Farlie-Gumbel-Morgenstern Copula |

gfiExtremes | Generalized Fiducial Inference for Extremes |

gfilinreg | Generalized Fiducial Inference for Low-Dimensional Robust Linear Regression |

gfilmm | Generalized Fiducial Inference for Normal Linear Mixed Models |

gfilogisreg | Generalized Fiducial Inference for Binary Logistic Regression Models |

GFisher | Generalized Fisher's Combination Tests Under Dependence |

gfiUltra | Generalized Fiducial Inference for Ultrahigh-Dimensional Regression |

gfmR | Implements Group Fused Multinomial Regression |

gfonts | Offline 'Google' Fonts for 'Markdown' and 'Shiny' |

gfoRmula | Parametric G-Formula |

gfpop | Graph-Constrained Functional Pruning Optimal Partitioning |

gg.gap | Define Segments in y-Axis for 'ggplot2' |

ggallin | Grab Bag of 'ggplot2' Functions |

ggalluvial | Alluvial Plots in 'ggplot2' |

GGally | Extension to 'ggplot2' |

ggalt | Extra Coordinate Systems, 'Geoms', Statistical Transformations, Scales and Fonts for 'ggplot2' |

ggamma | Generalized Gamma Probability Distribution |

gganimate | A Grammar of Animated Graphics |

ggasym | Asymmetric Matrix Plotting in 'ggplot2' |

ggbeeswarm | Categorical Scatter (Violin Point) Plots |

ggBubbles | Mini Bubble Plots for Comparison of Discrete Data with 'ggplot2' |

ggbuildr | Save Incremental Builds of Plots |

ggbump | Bump Chart and Sigmoid Curves |

ggcharts | Shorten the Distance from Data Visualization Idea to Actual Plot |

ggChernoff | Chernoff Faces for 'ggplot2' |

GGClassification | Gabriel Graph Based Large-Margin Classifiers |

ggconf | Simpler Appearance Modification of 'ggplot2' |

ggcorrplot | Visualization of a Correlation Matrix using 'ggplot2' |

ggdag | Analyze and Create Elegant Directed Acyclic Graphs |

ggdark | Dark Mode for 'ggplot2' Themes |

ggDCA | Calculate and Plot Decision Curve |

ggdemetra | 'ggplot2' Extension for Seasonal and Trading Day Adjustment with 'RJDemetra' |

ggdendro | Create Dendrograms and Tree Diagrams Using 'ggplot2' |

ggdist | Visualizations of Distributions and Uncertainty |

ggdmc | Cognitive Models |

gge | Genotype Plus Genotype-by-Environment Biplots |

ggeasy | Easy Access to 'ggplot2' Commands |

GGEBiplotGUI | Interactive GGE Biplots in R |

GGEBiplots | GGE Biplots with 'ggplot2' |

ggedit | Interactive 'ggplot2' Layer and Theme Aesthetic Editor |

ggeffects | Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs |

ggenealogy | Visualization Tools for Genealogical Data |

ggetho | Visualisation of High-Throughput Behavioural (i.e. Ethomics) Data |

ggExtra | Add Marginal Histograms to 'ggplot2', and More 'ggplot2' Enhancements |

ggfan | Summarise a Distribution Through Coloured Intervals |

ggfittext | Fit Text Inside a Box in 'ggplot2' |

ggfocus | Scales that Focus Specific Levels in your ggplot() |

ggforce | Accelerating 'ggplot2' |

ggformula | Formula Interface to the Grammar of Graphics |

ggfortify | Data Visualization Tools for Statistical Analysis Results |

ggfx | Pixel Filters for 'ggplot2' and 'grid' |

gggap | Streamlined Creation of Segments on the Y-Axis of 'ggplot2' Plots |

gggenes | Draw Gene Arrow Maps in 'ggplot2' |

ggghost | Capture the Spirit of Your 'ggplot2' Calls |

gggibbous | Moon Charts, a Pie Chart Alternative |

ggguitar | Utilities for Creating Guitar Tablature |

ggh4x | Hacks for 'ggplot2' |

gghalfnorm | Create a Half Normal Plot Using 'ggplot2' |

gghalves | Compose Half-Half Plots Using Your Favourite Geoms |

gghighlight | Highlight Lines and Points in 'ggplot2' |

gghilbertstrings | A Fast 'ggplot2'-Based Implementation of Hilbert Curves |

ggimage | Use Image in 'ggplot2' |

ggimg | Graphics Layers for Plotting Image Data with 'ggplot2' |

gginference | Visualise the Results of Inferential Statistics using 'ggplot2' |

gginnards | Explore the Innards of 'ggplot2' Objects |

ggip | Data Visualization for IP Addresses and Networks |

GGIR | Raw Accelerometer Data Analysis |

ggiraph | Make 'ggplot2' Graphics Interactive |

ggiraphExtra | Make Interactive 'ggplot2'. Extension to 'ggplot2' and 'ggiraph' |

ggjoy | Joyplots in 'ggplot2' |

gglasso | Group Lasso Penalized Learning Using a Unified BMD Algorithm |

gglm | Grammar of Graphics for Linear Model Diagnostic Plots |

gglogo | Geom for Logo Sequence Plots |

ggloop | Create 'ggplot2' Plots in a Loop |

gglorenz | Plotting Lorenz Curve with the Blessing of 'ggplot2' |

ggm | Graphical Markov Models with Mixed Graphs |

ggmap | Spatial Visualization with ggplot2 |

ggmcmc | Tools for Analyzing MCMC Simulations from Bayesian Inference |

ggmix | Variable Selection in Linear Mixed Models for SNP Data |

GGMncv | Gaussian Graphical Models with Nonconvex Regularization |

GGMnonreg | Non-Regularized Gaussian Graphical Models |

ggmosaic | Mosaic Plots in the 'ggplot2' Framework |

ggmr | Generalized Gauss Markov Regression |

GGMridge | Gaussian Graphical Models Using Ridge Penalty Followed by Thresholding and Reestimation |

ggmsa | Plot Multiple Sequence Alignment using 'ggplot2' |

GGMselect | Gaussian Graphs Models Selection |

ggmuller | Create Muller Plots of Evolutionary Dynamics |

ggmulti | High Dimensional Data Visualization |

ggnetwork | Geometries to Plot Networks with 'ggplot2' |

ggnewscale | Multiple Fill and Colour Scales in 'ggplot2' |

ggnormalviolin | A 'ggplot2' Extension to Make Normal Violin Plots |

ggnuplot | Make 'ggplot2' Look Like 'gnuplot' |

ggOceanMaps | Plot Data on Oceanographic Maps using 'ggplot2' |

ggpacman | A 'ggplot2' and 'gganimate' Version of Pac-Man |

ggpage | Creates Page Layout Visualizations |

ggparallel | Variations of Parallel Coordinate Plots for Categorical Data |

ggparliament | Parliament Plots |

ggparty | 'ggplot' Visualizations for the 'partykit' Package |

ggperiodic | Easy Plotting of Periodic Data with 'ggplot2' |

ggplot.multistats | Multiple Summary Statistics for Binned Stats/Geometries |

ggplot2 | Create Elegant Data Visualisations Using the Grammar of Graphics |

ggplot2movies | Movies Data |

ggplotAssist | 'RStudio' Addin for Teaching and Learning 'ggplot2' |

ggplotgui | Create Ggplots via a Graphical User Interface |

ggplotify | Convert Plot to 'grob' or 'ggplot' Object |

ggplotlyExtra | Extra Convenience Functions for 'Plotly' |

ggpmisc | Miscellaneous Extensions to 'ggplot2' |

ggPMX | 'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME Models |

ggpointdensity | A Cross Between a 2D Density Plot and a Scatter Plot |

ggpol | Visualizing Social Science Data with 'ggplot2' |

ggpolypath | Polygons with Holes for the Grammar of Graphics |

ggprism | A 'ggplot2' Extension Inspired by 'GraphPad Prism' |

ggpubr | 'ggplot2' Based Publication Ready Plots |

ggpval | Annotate Statistical Tests for 'ggplot2' |

ggQC | Quality Control Charts for 'ggplot' |

ggQQunif | Compare Big Datasets to the Uniform Distribution |

ggquickeda | Quickly Explore Your Data Using 'ggplot2' and 'table1' Summary Tables |

ggquiver | Quiver Plots for 'ggplot2' |

ggRandomForests | Visually Exploring Random Forests |

ggraph | An Implementation of Grammar of Graphics for Graphs and Networks |

ggraptR | Allows Interactive Visualization of Data Through a Web Browser GUI |

ggrasp | Gaussian-Based Genome Representative Selector with Prioritization |

ggrastr | Rasterize Layers for 'ggplot2' |

ggrepel | Automatically Position Non-Overlapping Text Labels with 'ggplot2' |

ggResidpanel | Panels and Interactive Versions of Diagnostic Plots using 'ggplot2' |

GGRidge | Graphical Group Ridge |

ggridges | Ridgeline Plots in 'ggplot2' |

ggrisk | Risk Score Plot for Cox Regression |

ggROC | package for roc curve plot with ggplot2 |

ggroups | Pedigree and Genetic Groups |

ggsci | Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2' |

ggseas | 'stats' for Seasonal Adjustment on the Fly with 'ggplot2' |

ggseqlogo | A 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos |

ggshadow | Shadow and Glow Geoms for 'ggplot2' |

ggside | Side Grammar Graphics |

ggsignif | Significance Brackets for 'ggplot2' |

ggsn | North Symbols and Scale Bars for Maps Created with 'ggplot2' or 'ggmap' |

ggsoccer | Plot Soccer Event Data |

ggsolvencyii | A 'ggplot2'-Plot of Composition of Solvency II SCR: SF and IM |

ggsom | New Data Visualisations for SOMs Networks |

ggspatial | Spatial Data Framework for ggplot2 |

ggspectra | Extensions to 'ggplot2' for Radiation Spectra |

ggstance | Horizontal 'ggplot2' Components |

ggstar | Multiple Geometric Shape Point Layer for 'ggplot2' |

ggstatsplot | 'ggplot2' Based Plots with Statistical Details |

ggstudent | Continuous Confidence Interval Plots using t-Distribution |

ggswissmaps | Offers Various Swiss Maps as Data Frames and 'ggplot2' Objects |

ggtern | An Extension to 'ggplot2', for the Creation of Ternary Diagrams |

ggtext | Improved Text Rendering Support for 'ggplot2' |

ggThemeAssist | Add-in to Customize 'ggplot2' Themes |

ggthemes | Extra Themes, Scales and Geoms for 'ggplot2' |

ggTimeSeries | Time Series Visualisations Using the Grammar of Graphics |

GGUM | Generalized Graded Unfolding Model |

ggupset | Combination Matrix Axis for 'ggplot2' to Create 'UpSet' Plots |

ggvenn | Draw Venn Diagram by 'ggplot2' |

ggVennDiagram | A 'ggplot2' Implement of Venn Diagram |

ggversa | Graficas Versatiles Con 'ggplot2' |

ggvis | Interactive Grammar of Graphics |

ggvoronoi | Voronoi Diagrams and Heatmaps with 'ggplot2' |

ggwordcloud | A Word Cloud Geom for 'ggplot2' |

ggx | A Natural Language Interface to 'ggplot2' |

gh | 'GitHub' 'API' |

GHap | Genome-Wide Haplotyping |

Ghat | Quantifying Evolution and Selection on Complex Traits |

ghcm | Functional Conditional Independence Testing with the GHCM |

ghee | Provides a Lightweight Interface for 'GitHub' through R |

ghibli | Studio Ghibli Colour Palettes |

Ghost | Missing Data Segments Imputation in Multivariate Streams |

ghql | General Purpose 'GraphQL' Client |

GHS | Graphical Horseshoe MCMC Sampler Using Data Augmented Block Gibbs Sampler |

ghyp | Generalized Hyperbolic Distribution and Its Special Cases |

ghypernet | Fit and Simulate Generalised Hypergeometric Ensembles of Graphs |

gibble | Geometry Decomposition |

gibbs.met | Naive Gibbs Sampling with Metropolis Steps |

GibbsACOV | Gibbs Sampler for One-Way Mixed-Effects ANOVA and ANCOVA Models |

gif | Graphical Independence Filtering |

Gifi | Multivariate Analysis with Optimal Scaling |

gifski | Highest Quality GIF Encoder |

gifti | Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information |

GIFTr | GIFT Questions Format Generator from Dataframes |

giftwrap | Take Shell Commands and Turn Them into R Functions |

gigg | Group Inverse-Gamma Gamma Shrinkage for Sparse Regression with Grouping Structure |

GIGrvg | Random Variate Generator for the GIG Distribution |

GillespieSSA | Gillespie's Stochastic Simulation Algorithm (SSA) |

GillespieSSA2 | Gillespie's Stochastic Simulation Algorithm for Impatient People |

gim | Generalized Integration Model |

gimme | Group Iterative Multiple Model Estimation |

gimmeTools | Supplemental Tools for the 'gimme' R Package |

gimms | Download and Process GIMMS NDVI3g Data |

GiNA | High Throughput Phenotyping |

GiniDistance | A New Gini Correlation Between Quantitative and Qualitative Variables |

GiniWegNeg | Computing the Gini-Based Coefficients for Weighted and Negative Attributes |

GInSARCorW | GACOS InSAR Correction Workflow |

gIPFrm | Generalized Iterative Proportional Fitting for Relational Models |

giphyr | R Interface to the Giphy API |

GiRaF | Gibbs Random Fields Analysis |

giscoR | Download Map Data from GISCO API - Eurostat |

GISTools | Some further GIS capabilities for R |

gistr | Work with 'GitHub' 'Gists' |

git2r | Provides Access to Git Repositories |

git2rdata | Store and Retrieve Data.frames in a Git Repository |

gitcreds | Query 'git' Credentials from 'R' |

gitear | Client to the 'gitea' API |

gitgadget | Rstudio Addin for Version Control and Assignment Management using Git |

githubinstall | A Helpful Way to Install R Packages Hosted on GitHub |

gitignore | Create Useful .gitignore Files for your Project |

gitlabr | Access to the Gitlab API |

gitlink | Add 'Git' Links to Your Web Based Assets |

givitiR | The GiViTI Calibration Test and Belt |

gjam | Generalized Joint Attribute Modeling |

GJRM | Generalised Joint Regression Modelling |

gk | g-and-k and g-and-h Distribution Functions |

GK2011 | Gaines and Kuklinski (2011) Estimators for Hybrid Experiments |

gkgraphR | Accessing the Official 'Google Knowledge Graph' API |

gkmSVM | Gapped-Kmer Support Vector Machine |

glacierSMBM | Glacier Surface Mass Balance Model |

glancedata | Generate tables and plots to get summaries of data |

glarma | Generalized Linear Autoregressive Moving Average Models |

glassdoor | Interface to 'Glassdoor' API |

glasso | Graphical Lasso: Estimation of Gaussian Graphical Models |

glassoFast | Fast Graphical LASSO |

glba | General Linear Ballistic Accumulator Models |

glca | Estimating a Group-Effect in Latent Class Analysis |

glcm | Calculate Textures from Grey-Level Co-Occurrence Matrices (GLCMs) |

gld | Estimation and Use of the Generalised (Tukey) Lambda Distribution |

GLDEX | Fitting Single and Mixture of Generalised Lambda Distributions (RS and FMKL) using Various Methods |

GLDreg | Fit GLD Regression Model and GLD Quantile Regression Model to Empirical Data |

gldrm | Generalized Linear Density Ratio Models |

GLIDE | Global and Individual Tests for Direct Effects |

glinternet | Learning Interactions via Hierarchical Group-Lasso Regularization |

gllm | Generalised log-Linear Model |

gllvm | Generalized Linear Latent Variable Models |

glm.deploy | 'C' and 'Java' Source Code Generator for Fitted Glm Objects |

glm.predict | Predicted Values and Discrete Changes for GLM |

glm2 | Fitting Generalized Linear Models |

GLMaSPU | An Adaptive Test on High Dimensional Parameters in Generalized Linear Models |

glmbb | All Hierarchical or Graphical Models for Generalized Linear Model |

glmc | Fitting Generalized Linear Models Subject to Constraints |

GLMcat | Generalized Linear Models for Categorical Responses |

glmdisc | Discretization and Grouping for Logistic Regression |

glmdm | R Code for Simulation of GLMDM |

glme | Generalized Linear Mixed Effects Models |

glmertree | Generalized Linear Mixed Model Trees |

glmglrt | GLRT P-Values in Generalized Linear Models |

glmlep | Fit GLM with LEP-Based Penalized Maximum Likelihood |

glmm | Generalized Linear Mixed Models via Monte Carlo Likelihood Approximation |

GLMMadaptive | Generalized Linear Mixed Models using Adaptive Gaussian Quadrature |

glmmboot | Bootstrap Resampling for Mixed Effects and Plain Models |

glmmEP | Generalized Linear Mixed Model Analysis via Expectation Propagation |

glmmfields | Generalized Linear Mixed Models with Robust Random Fields for Spatiotemporal Modeling |

glmmLasso | Variable Selection for Generalized Linear Mixed Models by L1-Penalized Estimation |

glmmML | Generalized Linear Models with Clustering |

GLMMRR | Generalized Linear Mixed Model (GLMM) for Binary Randomized Response Data |

glmmSeq | General Linear Mixed Models for Gene-Level Differential Expression |

glmmsr | Fit a Generalized Linear Mixed Model |

glmmTMB | Generalized Linear Mixed Models using Template Model Builder |

glmnet | Lasso and Elastic-Net Regularized Generalized Linear Models |

glmnetcr | Fit a Penalized Constrained Continuation Ratio Model for Predicting an Ordinal Response |

glmnetUtils | Utilities for 'Glmnet' |

GLMpack | Data and Code to Accompany Generalized Linear Models, 2nd Edition |

glmpath | L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model |

glmpathcr | Fit a Penalized Continuation Ratio Model for Predicting an Ordinal Response |

glmpca | Dimension Reduction of Non-Normally Distributed Data |

GLMsData | Generalized Linear Model Data Sets |

GlmSimulatoR | Creates Ideal Data for Generalized Linear Models |

glmtlp | Truncated Lasso Regularized Generalized Linear Models |

glmtoolbox | Set of Tools to Data Analysis using Generalized Linear Models |

glmtree | Logistic Regression Trees |

glmulti | Model Selection and Multimodel Inference Made Easy |

glmvsd | Variable Selection Deviation Measures and Instability Tests for High-Dimensional Generalized Linear Models |

glmx | Generalized Linear Models Extended |

GlobalDeviance | Global Deviance Permutation Tests |

GlobalFit | Bi-Level Optimization of Metabolic Network Models |

globalGSA | Global Gene-Set Analysis for Association Studies |

globalKinhom | Inhomogeneous K- And Pair Correlation Functions Using Global Estimators |

GlobalOptions | Generate Functions to Get or Set Global Options |

globalOptTests | Objective functions for benchmarking the performance of global optimization algorithms |

globals | Identify Global Objects in R Expressions |

globe | Plot 2D and 3D Views of the Earth, Including Major Coastline |

glogis | Fitting and Testing Generalized Logistic Distributions |

glow | Make Plots that Glow |

glpkAPI | R Interface to C API of GLPK |

glrt | Generalized Logrank Tests for Interval-censored Failure Time Data |

gLRTH | Genome-Wide Association and Linkage Analysis under Heterogeneity |

GLSME | Generalized Least Squares with Measurement Error |

glue | Interpreted String Literals |

gluedown | Wrap Vectors in Markdown Formatting |

gluvarpro | Glucose Variability Measures from Continuous Glucose Monitoring Data |

glvmfit | Methods to Assess Generalized Latent Variable Model Fit |

glycanr | Tools for Analysing N-Glycan Data |

gm | Generate Music Easily and Show Them Anywhere |

gma | Granger Mediation Analysis |

GMAC | Genomic Mediation Analysis with Adaptive Confounding Adjustment |

gmailr | Access the 'Gmail' 'RESTful' API |

GmAMisc | 'Gianmarco Alberti' Miscellaneous |

gmapsdistance | Distance and Travel Time Between Two Points from Google Maps |

gmat | Simulation of Graphical Correlation Matrices |

GMCM | Fast Estimation of Gaussian Mixture Copula Models |

gMCP | Graph Based Multiple Comparison Procedures |

gmDatabase | Accessing a Geometallurgical Database with R |

GMDH | Short Term Forecasting via GMDH-Type Neural Network Algorithms |

GMDH2 | Binary Classification via GMDH-Type Neural Network Algorithms |

GMDHreg | Regression using GMDH Algorithms |

Gmedian | Geometric Median, k-Medians Clustering and Robust Median PCA |

gmeta | Meta-Analysis via a Unified Framework of Confidence Distribution |

gmfd | Inference and Clustering of Functional Data |

gmGeostats | Geostatistics for Compositional Analysis |

gmgm | Gaussian Mixture Graphical Model Learning and Inference |

Gmisc | Descriptive Statistics, Transition Plots, and More |

GMKMcharlie | Unsupervised Gaussian Mixture and Minkowski and Spherical K-Means with Constraints |

gmm | Generalized Method of Moments and Generalized Empirical Likelihood |

GMMAT | Generalized Linear Mixed Model Association Tests |

GMMBoost | Likelihood-Based Boosting for Generalized Mixed Models |

gmnl | Multinomial Logit Models with Random Parameters |

gmodels | Various R Programming Tools for Model Fitting |

gMOIP | Tools for 2D and 3D Plots of Single and Multi-Objective Linear/Integer Programming Models |

gmp | Multiple Precision Arithmetic |

GMPro | Graph Matching with Degree Profiles |

gms | 'GAMS' Modularization Support Package |

GMSE | Generalised Management Strategy Evaluation Simulator |

GMSimpute | Generalized Mass Spectrum Missing Peaks Abundance Imputation |

gmt | Interface Between GMT Map-Making Software and R |

gmvarkit | Estimate Gaussian Mixture Vector Autoregressive Model |

gMWT | Generalized Mann-Whitney Type Tests |

GMZTests | Statistical Tests |

GNAR | Methods for Fitting Network Time Series Models |

GNE | Computation of Generalized Nash Equilibria |

gnFit | Goodness of Fit Test for Continuous Distribution Functions |

gnlm | Generalized Nonlinear Regression Models |

gnm | Generalized Nonlinear Models |

gnn | Generative Neural Networks |

gnomonicM | Estimate Natural Mortality for Different Life Stages |

gnorm | Generalized Normal/Exponential Power Distribution |

GNRS | Access the 'Geographic Name Resolution Service' |

GNSSseg | Homogenization of GNSS Series |

gnumeric | Read Data from Files Readable by 'gnumeric' |

gofastr | Fast DocumentTermMatrix and TermDocumentMatrix Creation |

gofCopula | Goodness-of-Fit Tests for Copulae |

goffda | Goodness-of-Fit Tests for Functional Data |

gofgamma | Goodness-of-Fit Tests for the Gamma Distribution |

GoFKernel | Testing Goodness-of-Fit with the Kernel Density Estimator |

GofKmt | Khmaladze Martingale Transformation Goodness-of-Fit Test |

GOFShiny | Interactive Document for Working with Goodness of Fit Analysis |

goft | Tests of Fit for some Probability Distributions |

goftest | Classical Goodness-of-Fit Tests for Univariate Distributions |

GOGANPA | GO-Functional-Network-based Gene-Set-Analysis |

gogarch | Generalized Orthogonal GARCH (GO-GARCH) models |

goldi | Gene Ontology Label Discernment and Identification |

golem | A Framework for Robust Shiny Applications |

gomms | GLM-Based Ordination Method |

GomoGomonoMi | Animate Text using the 'Animate.css' Library |

gontr | Dataset for 'GOxploreR' |

GoodmanKruskal | Association Analysis for Categorical Variables |

goodpractice | Advice on R Package Building |

googleAnalyticsR | Google Analytics API into R |

googleAuthR | Authenticate and Create Google APIs |

googleCloudRunner | R Scripts in the Google Cloud via Cloud Run, Cloud Build and Cloud Scheduler |

googleCloudStorageR | Interface with Google Cloud Storage API |

googleCloudVisionR | Access to the 'Google Cloud Vision' API for Image Recognition, OCR and Labeling |

googleComputeEngineR | R Interface with Google Compute Engine |

googledrive | An Interface to Google Drive |

googleformr | Collect Data Programmatically by POST Methods to Google Forms |

GoogleKnowledgeGraphR | Retrieve Information from 'Google Knowledge Graph' API |

googleLanguageR | Call Google's 'Natural Language' API, 'Cloud Translation' API, 'Cloud Speech' API and 'Cloud Text-to-Speech' API |

googlenlp | An Interface to Google's Cloud Natural Language API |

googlePolylines | Encoding Coordinates into 'Google' Polylines |

googlePrintr | Connect to 'Google Cloud Print' API |

googlePublicData | Working with Google's 'Public Data Explorer' DSPL Metadata Files |

googler | Google from the R Console |

googlesheets | Manage Google Spreadsheets from R |

googlesheets4 | Access Google Sheets using the Sheets API V4 |

googleTagManageR | Access the 'Google Tag Manager' API using R |

googleVis | R Interface to Google Charts |

googleway | Accesses Google Maps APIs to Retrieve Data and Plot Maps |

GOplot | Visualization of Functional Analysis Data |

GORCure | Fit Generalized Odds Rate Mixture Cure Model with Interval Censored Data |

goric | Generalized Order-Restricted Information Criterion |

gorica | Evaluation of Inequality Constrained Hypotheses Using GORICA |

gotop | Scroll Back to Top Icon in 'rmarkdown' and 'shiny' |

govdown | GOV.UK Style Templates for R Markdown |

govStatJPN | functions to get public survey data in Japan |

gower | Gower's Distance |

GOxploreR | Structural Exploration of the Gene Ontology (GO) Knowledge Base |

goxygen | In-Code Documentation for 'GAMS' |

gpairs | The Generalized Pairs Plot |

GPareto | Gaussian Processes for Pareto Front Estimation and Optimization |

GPArotation | GPA Factor Rotation |

gpboost | Combining Tree-Boosting with Gaussian Process and Mixed Effects Models |

gpbStat | Comprehensive Statistical Analysis of Plant Breeding Experiments |

gpclib | General Polygon Clipping Library for R |

GPCMlasso | Differential Item Functioning in Generalized Partial Credit Models |

gPdtest | Bootstrap goodness-of-fit test for the generalized Pareto distribution |

GPFDA | Gaussian Process for Functional Data Analysis |

GPfit | Gaussian Processes Modeling |

gpg | GNU Privacy Guard for R |

GpGp | Fast Gaussian Process Computation Using Vecchia's Approximation |

GPIC | Quantifying Group Performance in Individual Competitions |

gpindex | Generalized Price and Quantity Indexes |

gpk | 100 Data Sets for Statistics Education |

GPL2025 | Convert Chip ID of the GPL2015 into GeneBank Accession and ENTREZID |

gplite | Lightweight Implementation for the Most Common Gaussian Process Models |

gplm | Generalized Partial Linear Models (GPLM) |

gplots | Various R Programming Tools for Plotting Data |

GPLTR | Generalized Partially Linear Tree-Based Regression Model |

GPM | Gaussian Process Modeling of Multi-Response and Possibly Noisy Datasets |

gpmap | Analysing and Plotting Genotype-Phenotype Maps |

GPoM | Generalized Polynomial Modelling |

GPoM.FDLyapu | Lyapunov Exponents and Kaplan-Yorke Dimension |

GPP | Gaussian Process Projection |

gppm | Gaussian Process Panel Modeling |

GPrank | Gaussian Process Ranking of Multiple Time Series |

GPRMortality | Gaussian Process Regression for Mortality Rates |

gProfileR | Interface to the 'g:Profiler' Toolkit |

gprofiler2 | Interface to the 'g:Profiler' Toolset |

GPSCDF | Generalized Propensity Score Cumulative Distribution Function |

GPSeqClus | Sequential Clustering Algorithm for Location Data |

gptk | Gaussian Processes Tool-Kit |

GPvam | Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling |

GPvecchia | Scalable Gaussian-Process Approximations |

gqlr | 'GraphQL' Server in R |

gquad | Prediction of G Quadruplexes and Other Non-B DNA Motifs |

grabsampling | Probability of Detection for Grab Sample Selection |

Grace | Graph-Constrained Estimation and Hypothesis Tests |

gradDescent | Gradient Descent for Regression Tasks |

grade | Binary Grading functions for R |

gradeR | Helps Grade Assignment Submissions that are R Scripts |

gradientPickerD3 | Interactive Color Gradient Picker Using 'htmlwidgets' and the Modified JS Script 'jquery-gradient-picker' |

gRain | Graphical Independence Networks |

grainchanger | Moving-Window and Direct Data Aggregation |

grainscape | Landscape Connectivity, Habitat, and Protected Area Networks |

gramEvol | Grammatical Evolution for R |

GRANBase | Creating Continuously Integrated Package Repositories from Manifests |

GRANCore | Classes and Methods for 'GRANBase' |

grangers | Inference on Granger-Causality in the Frequency Domain |

granova | Graphical Analysis of Variance |

granovaGG | Graphical Analysis of Variance Using ggplot2 |

GRAPE | Gene-Ranking Analysis of Pathway Expression |

grapes | Make Binary Operators |

gRapfa | Acyclic Probabilistic Finite Automata |

graph3d | A Wrapper of the JavaScript Library 'vis-graph3d' |

graph4lg | Build Graphs for Landscape Genetics Analysis |

GrapheR | A Multi-Platform GUI for Drawing Customizable Graphs in R |

grapherator | A Modular Multi-Step Graph Generator |

graphframes | Interface for 'GraphFrames' |

graphhopper | An R Interface to the 'GraphHopper' Directions API |

graphicalExtremes | Statistical Methodology for Graphical Extreme Value Models |

graphicalVAR | Graphical VAR for Experience Sampling Data |

graphkernels | Graph Kernels |

graphlayouts | Additional Layout Algorithms for Network Visualizations |

graphon | A Collection of Graphon Estimation Methods |

GraphPCA | Graphical Tools of Histogram PCA |

graphql | A GraphQL Query Parser |

graphscan | Cluster Detection with Hypothesis Free Scan Statistic |

graphsim | Simulate Expression Data from 'igraph' Networks |

graphTweets | Visualise Twitter Interactions |

GrassmannOptim | Grassmann Manifold Optimization |

grates | Grouped Date Classes |

gratia | Graceful 'ggplot'-Based Graphics and Other Functions for GAMs Fitted Using 'mgcv' |

graticule | Meridional and Parallel Lines for Maps |

gratis | Generating Time Series with Diverse and Controllable Characteristics |

grattan | Australian Tax Policy Analysis |

gravitas | Explore Probability Distributions for Bivariate Temporal Granularities |

gravity | Estimation Methods for Gravity Models |

gRbase | A Package for Graphical Modelling in R |

gRc | Inference in Graphical Gaussian Models with Edge and Vertex Symmetries |

GRCdata | Parameter Inference and Optimal Designs for Grouped and/or Right-Censored Count Data |

grec | Gradient-Based Recognition of Spatial Patterns in Environmental Data |

GreedyExperimentalDesign | Greedy Experimental Design Construction |

GreedyExperimentalDesignJARs | GreedyExperimentalDesign JARs |

greekLetters | Routines for Writing Greek Letters and Mathematical Symbols on the 'RStudio' and 'RGui' |

greenclust | Combine Categories Using Greenacre's Method |

Greg | Regression Helper Functions |

gremlin | Mixed-Effects REML Incorporating Generalized Inverses |

GREMLINS | Generalized Multipartite Networks |

gren | Adaptive Group-Regularized Logistic Elastic Net Regression |

greport | Graphical Reporting for Clinical Trials |

greta | Simple and Scalable Statistical Modelling in R |

gretel | Generalized Path Analysis for Social Networks |

gretlR | Knit-Engine for 'Gretl' |

grex | Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data |

greybox | Toolbox for Model Building and Forecasting |

greyzoneSurv | Fit a Grey-Zone Model with Survival Data |

grf | Generalized Random Forests |

gridBase | Integration of base and grid graphics |

gridBezier | Bezier Curves in 'grid' |

gridDebug | Debugging 'grid' Graphics |

gridExtra | Miscellaneous Functions for "Grid" Graphics |

gridGeometry | Polygon Geometry in 'grid' |

gridGraphics | Redraw Base Graphics Using 'grid' Graphics |

gridGraphviz | Drawing Graphs with 'grid' |

GridOnClusters | Cluster-Preserving Multivariate Joint Grid Discretization |

gridsampler | A Simulation Tool to Determine the Required Sample Size for Repertory Grid Studies |

gridSVG | Export 'grid' Graphics as SVG |

gridtext | Improved Text Rendering Support for 'Grid' Graphics |

gRim | Graphical Interaction Models |

grImport | Importing Vector Graphics |

grImport2 | Importing 'SVG' Graphics |

GrimR | Calculate Optical Parameters from Spindle Stage Measurements |

gripp | General Inverse Problem Platform |

grizbayr | Bayesian Inference for A|B and Bandit Marketing Tests |

grmsem | Genetic-Relationship-Matrix Structural Equation Modelling (GRMSEM) |

grnn | General regression neural network |

GROAN | Genomic Regression Workbench |

grobblR | Creating Flexible, Reproducible 'PDF' Reports |

groc | Generalized Regression on Orthogonal Components |

gromovlab | Gromov-Hausdorff Type Distances for Labeled Metric Spaces |

groundhog | Reproducible Scripts via Version-Specific Package Loading |

GroupBN | Inferring Group Bayesian Networks using Hierarchical Feature Clustering |

GroupComparisons | Paired/Unpaired Parametric/Non-Parametric Group Comparisons |

groupdata2 | Creating Groups from Data |

grouped | Regression Analysis of Grouped and Coarse Data |

groupedstats | Grouped Statistical Analyses in a Tidy Way |

groupedSurv | Efficient Estimation of Grouped Survival Models |

groupICA | Independent Component Analysis for Grouped Data |

groupr | Groups with Inapplicable Values |

groupRemMap | Regularized Multivariate Regression for Identifying Master Predictors Using the GroupRemMap Penalty |

GroupSeq | A GUI-Based Program to Compute Probabilities Regarding Group Sequential Designs |

groupsubsetselection | Group Subset Selection |

GroupTest | Multiple Testing Procedure for Grouped Hypotheses |

groupWQS | Grouped Weighted Quantile Sum Regression |

grove | Wavelet Functional ANOVA Through Markov Groves |

growfunctions | Bayesian Non-Parametric Dependent Models for Time-Indexed Functional Data |

growth | Multivariate Normal and Elliptically-Contoured Repeated Measurements Models |

growthcurver | Simple Metrics to Summarize Growth Curves |

growthmodels | Nonlinear Growth Models |

growthPheno | Plotting, Smoothing and Growth Trait Extraction for Longitudinal Data |

growthrate | Bayesian reconstruction of growth velocity |

growthrates | Estimate Growth Rates from Experimental Data |

grpCox | Penalized Cox Model for High-Dimensional Data with Grouped Predictors |

grplasso | Fitting User-Specified Models with Group Lasso Penalty |

grplassocat | Standardization for Group Lasso Models with Categorical Predictors |

grpreg | Regularization Paths for Regression Models with Grouped Covariates |

grpSLOPE | Group Sorted L1 Penalized Estimation |

GrpString | Patterns and Statistical Differences Between Two Groups of Strings |

GRPtests | Goodness-of-Fit Tests in High-Dimensional GLMs |

grr | Alternative Implementations of Base R Functions |

GRS.test | GRS Test for Portfolio Efficiency, Its Statistical Power Analysis, and Optimal Significance Level Calculation |

grt | General Recognition Theory |

GRTo | Tools for the Analysis of Gutenberg-Richter Distributions of Earthquake Magnitudes |

GSA | Gene Set Analysis |

GSA.UN | Global Sensitivity Analysis Tool |

GSAfisherCombined | Gene Set Analysis with Fisher Combined Method |

GSAgm | Gene Set Analysis using the Gamma Method |

gsalib | Utility Functions For GATK |

GSAQ | Gene Set Analysis with QTL |

gsarima | Two Functions for Generalized SARIMA Time Series Simulation |

gsbDesign | Group Sequential Bayes Design |

gsbm | Estimate Parameters in the Generalized SBM |

gscaLCA | Generalized Structure Component Analysis- Latent Class Analysis & Latent Class Regression |

gscounts | Group Sequential Designs with Negative Binomial Outcomes |

GSDA | Gene Set Distance Analysis (GSDA) |

gsDesign | Group Sequential Design |

GSE | Robust Estimation in the Presence of Cellwise and Casewise Contamination and Missing Data |

gsEasy | Gene Set Enrichment Analysis in R |

GSED | Group Sequential Enrichment Design |

gSeg | Graph-Based Change-Point Detection (g-Segmentation) |

GSelection | Genomic Selection |

gSEM | Semi-Supervised Generalized Structural Equation Modeling |

gset | Group Sequential Design in Equivalence Studies |

gsheet | Download Google Sheets Using Just the URL |

gsisdecoder | High Efficient Functions to Decode NFL Player IDs |

gsl | Wrapper for the Gnu Scientific Library |

gsloid | Global Sea Level and Oxygen Isotope Data |

GSM | Gamma Shape Mixture |

gsmoothr | Smoothing tools |

GSMX | Multivariate Genomic Selection |

GSODR | Global Surface Summary of the Day ('GSOD') Weather Data Client |

GSparO | Group Sparse Optimization |

gsrsb | Group Sequential Refined Secondary Boundary |

gss | General Smoothing Splines |

GSSE | Genotype-Specific Survival Estimation |

gstar | Generalized Space-Time Autoregressive Model |

gstat | Spatial and Spatio-Temporal Geostatistical Modelling, Prediction and Simulation |

gStream | Graph-Based Sequential Change-Point Detection for Streaming Data |

gsubfn | Utilities for Strings and Function Arguments |

gsw | Gibbs Sea Water Functions |

GsymPoint | Estimation of the Generalized Symmetry Point, an Optimal Cutpoint in Continuous Diagnostic Tests |

gsynth | Generalized Synthetic Control Method |

gt | Easily Create Presentation-Ready Display Tables |

gt4ireval | Generalizability Theory for Information Retrieval Evaluation |

gtable | Arrange 'Grobs' in Tables |

gtcorr | Calculate efficiencies of group testing algorithms with correlated responses |

gte | Generalized Turnbull's Estimator |

gTests | Graph-Based Two-Sample Tests |

gtfs2gps | Converting Transport Data from GTFS Format to GPS-Like Records |

gtfsio | Read and Write General Transit Feed Specification (GTFS) Files |

gtfsrouter | Routing with GTFS (General Transit Feed Specification) Data |

gtfstools | General Transit Feed Specification (GTFS) Editing and Analysing Tools |

gtheory | Apply Generalizability Theory with R |

gtools | Various R Programming Tools |

gtop | Game-Theoretically OPtimal (GTOP) Reconciliation Method |

gtrendsR | Perform and Display Google Trends Queries |

gtsummary | Presentation-Ready Data Summary and Analytic Result Tables |

gtWAS | Genome and Transcriptome Wide Association Study |

guaguas | Nombres Inscritos en Chile (1920 - 2019) |

guardianapi | Access 'The Guardian' Newspaper Open Data API |

Guerry | Maps, Data and Methods Related to Guerry (1833) "Moral Statistics of France" |

guess | Adjust Estimates of Learning for Guessing |

GuessCompx | Empirically Estimates Algorithm Complexity |

guf | Generally Useful Functions |

GUIDE | GUI for DErivatives in R |

GUILDS | Implementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure |

guiplot | User-Friendly GUI Plotting Tools |

GUIProfiler | Graphical User Interface for Rprof() |

gumbel | The Gumbel-Hougaard Copula |

GUniFrac | Generalized UniFrac Distances |

gunit | Converts Conductance Units |

gunsales | Statistical Analysis of Monthly Background Checks of Gun Purchases |

gustave | A User-Oriented Statistical Toolkit for Analytical Variance Estimation |

gutenbergr | Download and Process Public Domain Works from Project Gutenberg |

GUTS | Fast Calculation of the Likelihood of a Stochastic Survival Model |

GVARX | Perform Global Vector Autoregression Estimation and Inference |

gvc | Global Value Chains Tools |

gvcm.cat | Regularized Categorical Effects/Categorical Effect Modifiers/Continuous/Smooth Effects in GLMs |

gvcR | Genotypic Variance Components |

gvlma | Global Validation of Linear Models Assumptions |

gwaRs | Manhattan, Q-Q, and PCA Plots using 'ggplot2' |

GWASbyCluster | Identifying Significant SNPs in Genome Wide Association Studies (GWAS) via Clustering |

GWASExactHW | Exact Hardy-Weinburg testing for Genome Wide Association Studies |

gwasforest | Make Forest Plot with GWAS Data |

GWASinlps | Nonlocal Prior Based Iterative SNP Selection Tool for Genome-Wide Association Studies |

GWASinspector | Comprehensive and Easy to Use Quality Control of GWAS Results |

gwdegree | A Shiny App to Aid Interpretation of Geometrically-Weighted Degree Estimates in Exponential Random Graph Models |

gwer | Geographically Weighted Elliptical Regression |

gwerAM | Controlling the genome-wide type I error rate in association mapping experiments |

GWEX | Multi-Site Stochastic Models for Daily Precipitation and Temperature |

gwfa | Geographically Weighted Fractal Analysis |

GWG | Calculation of probabilities for inadequate and excessive gestational weight gain |

GWI | Count and Continuous Generalized Variability Indexes |

gWidgets2 | Rewrite of gWidgets API for Simplified GUI Construction |

gWidgets2RGtk2 | Implementation of gWidgets2 for the RGtk2 Package |

gWidgets2tcltk | Toolkit Implementation of gWidgets2 for tcltk |

GWLelast | Geographically Weighted Logistic Elastic Net Regression |

GWmodel | Geographically-Weighted Models |

GWnnegPCA | Geographically Weighted Non-Negative Principal Components Analysis |

GWpcor | Geographically Weighted Partial Correlation Coefficient |

gwpcormapper | Geographically Weighted Partial Correlation Mapper |

gWQS | Generalized Weighted Quantile Sum Regression |

GWRM | Generalized Waring Regression Model for Count Data |

gwrpvr | Genome-Wide Regression P-Value (Gwrpv) |

gwrr | Fits geographically weighted regression models with diagnostic tools |

GWSDAT | GroundWater Spatiotemporal Data Analysis Tool (GWSDAT) |

gwsem | Genome-Wide Structural Equation Modeling |

GWsignif | Estimating Genome-Wide Significance for Whole Genome Sequencing Studies, Either Single SNP Tests or Region-Based Tests |

GxEScanR | Run GWAS/GWEIS Scans Using Binary Dosage Files |

GxM | Maximum Likelihood Estimation for Gene-by-Measured Environment Interaction Models |

gym | Provides Access to the OpenAI Gym API |

h2o | R Interface for the 'H2O' Scalable Machine Learning Platform |

h2o4gpu | Interface to 'H2O4GPU' |

H2x2Factorial | Sample Size Calculation in Hierarchical 2x2 Factorial Trials |

haarfisz | Software to perform Haar Fisz transforms |

hablar | Non-Astonishing Results in R |

HAC | Estimation, Simulation and Visualization of Hierarchical Archimedean Copulae (HAC) |

hackeRnews | Wrapper for the 'Official Hacker News' API |

hacksaw | Additional Tools for Splitting and Cleaning Data |

HACSim | Iterative Extrapolation of Species' Haplotype Accumulation Curves for Genetic Diversity Assessment |

HadamardR | Hadamard Matrix Generation |

HaDeX | Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data |

HadoopStreaming | Utilities for using R scripts in Hadoop streaming |

hadron | Analysis Framework for Monte Carlo Simulation Data in Physics |

hagis | Analysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity |

hail | Read HYDRA Rainfall Data |

hal9001 | The Scalable Highly Adaptive Lasso |

haldensify | Highly Adaptive Lasso Conditional Density Estimation |

halfcircle | Plot Halfcircle Diagram |

hamlet | Hierarchical Optimal Matching and Machine Learning Toolbox |

handlr | Convert Among Citation Formats |

HandTill2001 | Multiple Class Area under ROC Curve |

handyplots | Handy Plots |

hans | Haversines are not Slow |

hansard | Provides Easy Downloading Capabilities for the UK Parliament API |

hapassoc | Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm |

Hapi | Inference of Chromosome-Length Haplotypes Using Genomic Data of Single Gamete Cells |

HAPim | HapIM |

Haplin | Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes |

haplo.stats | Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous |

haploR | Query 'HaploReg', 'RegulomeDB' |

HaploSim | Functions to simulate haplotypes |

haplotyper | Tool for Clustering Genotypes in Haplotypes |

haplotypes | Manipulating DNA Sequences and Estimating Unambiguous Haplotype Network with Statistical Parsimony |

happybiRthday | Calculate Upcoming Birthday Dates of Github Repos |

happytime | Two Games to Relieve the Boredom |

hapsim | Haplotype Data Simulation |

hardhat | Construct Modeling Packages |

HardyWeinberg | Statistical Tests and Graphics for Hardy-Weinberg Equilibrium |

HARModel | Heterogeneous Autoregressive Models |

harmonicmeanp | Harmonic Mean p-Values and Model Averaging by Mean Maximum Likelihood |

HarmonicRegression | Harmonic Regression to One or more Time Series |

harrietr | Wrangle Phylogenetic Distance Matrices and Other Utilities |

harrypotter | Palettes Generated from All "Harry Potter" Movies |

HARtools | Read HTTP Archive ('HAR') Data |

Harvest.Tree | Harvest the Classification Tree |

hash | Full Feature Implementation of Hash/Associated Arrays/Dictionaries |

hashids | Generate Short Unique YouTube-Like IDs (Hashes) from Integers |

hashr | Hash R Objects to Integers Fast |

hasseDiagram | Drawing Hasse Diagram |

haven | Import and Export 'SPSS', 'Stata' and 'SAS' Files |

hawkes | Hawkes process simulation and calibration toolkit |

hawkesbow | Estimation of Hawkes Processes from Binned Observations |

hazer | Identifying Foggy and Cloudy Images by Quantifying Haziness |

hazus | Damage functions from FEMA's HAZUS software for use in modeling financial losses from natural disasters |

hBayesDM | Hierarchical Bayesian Modeling of Decision-Making Tasks |

hbbr | Hierarchical Bayesian Benefit-Risk Assessment Using Discrete Choice Experiment |

HBglm | Hierarchical Bayesian Regression for GLMs |

hbim | Hill/Bliss Independence Model for Combination Vaccines |

hbm | Hierarchical Block Matrix Analysis |

hbmem | Hierarchical Bayesian Analysis of Recognition Memory |

hbsae | Hierarchical Bayesian Small Area Estimation |

HBSTM | Hierarchical Bayesian Space-Time models for Gaussian space-time data |

HBV.IANIGLA | Modular Hydrological Model |

hcandersenr | H.C. Andersens Fairy Tales |

hcc | Hidden correlation check |

hcci | Interval estimation for the parameters of linear models with heteroskedasticity (Wild Bootstrap) |

HCD | Hierarchical Community Detection by Recursive Partitioning |

hchinamap | Mapping China and Its Provinces |

HCmodelSets | Regression with a Large Number of Potential Explanatory Variables |

hcp | Change Point Estimation for Regression with Heteroscedastic Data |

HCR | Causal Discovery from Discrete Data using Hidden Compact Representation |

HCTR | Higher Criticism Tuned Regression |

hctrial | Using Historical Controls for Designing Phase II Clinical Trials |

hda | Heteroscedastic Discriminant Analysis |

hdbinseg | Change-Point Analysis of High-Dimensional Time Series via Binary Segmentation |

hdbm | High Dimensional Bayesian Mediation Analysis |

HDCI | High Dimensional Confidence Interval Based on Lasso and Bootstrap |

HDclassif | High Dimensional Supervised Classification and Clustering |

HDclust | Clustering High Dimensional Data with Hidden Markov Model on Variable Blocks |

HDcpDetect | Detect Change Points in Means of High Dimensional Data |

HDCurves | Hierarchical Derivative Curve Estimation |

hdd | Easy Manipulation of Out of Memory Data Sets |

HDDesign | Sample Size Calculation for High Dimensional Classification Study |

hddplot | Use Known Groups in High-Dimensional Data to Derive Scores for Plots |

hddtools | Hydrological Data Discovery Tools |

hdf5r | Interface to the 'HDF5' Binary Data Format |

hdfqlr | Interface to 'HDFql' API |

HDGLM | Tests for High Dimensional Generalized Linear Models |

hdi | High-Dimensional Inference |

HDInterval | Highest (Posterior) Density Intervals |

HDiR | Directional Highest Density Regions |

hdiVAR | Statistical Inference for Noisy Vector Autoregression |

hdlm | Fitting High Dimensional Linear Models |

HDLSSkST | Distribution-Free Exact High Dimensional Low Sample Size k-Sample Tests |

hdm | High-Dimensional Metrics |

HDMD | Statistical Analysis Tools for High Dimension Molecular Data (HDMD) |

hdme | High-Dimensional Regression with Measurement Error |

HDMT | A Multiple Testing Procedure for High-Dimensional Mediation Hypotheses |

hdnom | Benchmarking and Visualization Toolkit for Penalized Cox Models |

HDoutliers | Leland Wilkinson's Algorithm for Detecting Multidimensional Outliers |

hdpca | Principal Component Analysis in High-Dimensional Data |

HDPenReg | High-Dimensional Penalized Regression |

hdpGLM | Hierarchical Dirichlet Process Generalized Linear Models |

hdrcde | Highest Density Regions and Conditional Density Estimation |

hds | Hazard Discrimination Summary |

HDtest | High Dimensional Hypothesis Testing for Mean Vectors, Covariance Matrices, and White Noise of Vector Time Series |

HDtweedie | The Lasso for the Tweedie's Compound Poisson Model Using an IRLS-BMD Algorithm |

healthcareai | Tools for Healthcare Machine Learning |

healthfinance | Financial Projections and Planning for Health Care Practices |

healthforum | Scrape Patient Forum Data |

healthyR | Hospital Data Analysis Workflow Tools |

healthyR.data | Data Only Package to 'healthyR' |

healthyR.ts | The Time Series Modeling Companion to 'healthyR' |

healthyverse | Easily Install and Load the 'healthyverse' |

heatex | Heat exchange calculations during physical activity |

heatmap3 | An Improved Heatmap Package |

heatmapFit | Fit Statistic for Binary Dependent Variable Models |

heatmaply | Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2' |

heatwaveR | Detect Heatwaves and Cold-Spells |

heavy | Robust Estimation Using Heavy-Tailed Distributions |

HeckmanEM | Fit Normal or Student-t Heckman Selection Models |

heddlr | Dynamic R Markdown Document Generation |

hedgehog | Property-Based Testing |

heemod | Markov Models for Health Economic Evaluations |

heims | Decode and Validate HEIMS Data from Department of Education, Australia |

helda | Preprocess Data and Get Better Insights from Machine Learning Models |

helixvis | Visualize Alpha-Helical Peptide Sequences |

HellCor | The Hellinger Correlation |

hellno | Providing 'stringsAsFactors=FALSE' Variants of 'data.frame()' and 'as.data.frame()' |

helloJavaWorld | Hello Java World |

helminthR | Access London Natural History Museum Host-Helminth Record Database |

HelpersMG | Tools for Environmental Analyses, Ecotoxicology and Various R Functions |

helsinki | R Tools for Helsinki Open Data |

HEMDAG | Hierarchical Ensemble Methods for Directed Acyclic Graphs |

heplots | Visualizing Hypothesis Tests in Multivariate Linear Models |

here | A Simpler Way to Find Your Files |

hereR | 'sf'-Based Interface to the 'HERE' REST APIs |

hergm | Hierarchical Exponential-Family Random Graph Models |

heritability | Marker-Based Estimation of Heritability Using Individual Plant or Plot Data |

heritEWAS | Identify Heritable Methylation Marks |

HeritSeq | Heritability of Gene Expression for Next-Generation Sequencing |

hermite | Generalized Hermite Distribution |

hermiter | Efficient Sequential and Batch Estimation of Univariate and Bivariate Probability Density Functions and Cumulative Distribution Functions along with Quantiles (Univariate) and Spearman's Correlation (Bivariate) |

hero | Spatio-Temporal (Hero) Sandwich Smoother |

hesim | Health Economic Simulation Modeling and Decision Analysis |

HeterFunctionalData | Test of No Main and/or Interaction Effects in Functional Data |

HeteroGGM | Gaussian Graphical Model-Based Heterogeneity Analysis |

hetGP | Heteroskedastic Gaussian Process Modeling and Design under Replication |

HETOP | MLE and Bayesian Estimation of Heteroskedastic Ordered Probit (HETOP) Model |

hett | Heteroscedastic t-Regression |

hettreatreg | Heterogeneous Treatment Effects in Regression Analysis |

hettx | Fisherian and Neymanian Methods for Detecting and Measuring Treatment Effect Variation |

hetu | Structural Handling of Finnish Personal Identity Numbers |

heuristica | Heuristics Including Take the Best and Unit-Weight Linear |

heuristicsmineR | Discovery of Process Models with the Heuristics Miner |

hexbin | Hexagonal Binning Routines |

hexSticker | Create Hexagon Sticker in R |

HextractoR | Integrated Tool for Hairping Extraction of RNA Sequences |

hextri | Hexbin Plots with Triangles |

hexView | Viewing Binary Files |

hflights | Flights that departed Houston in 2011 |

hglasso | Learning graphical models with hubs |

hglm | Hierarchical Generalized Linear Models |

hglm.data | Data for the 'hglm' Package |

hgm | Holonomic Gradient Method and Gradient Descent |

HGNChelper | Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols |

HGSL | Heterogeneous Group Square-Root Lasso |

hgutils | Collection of Utility Functions |

HH | Statistical Analysis and Data Display: Heiberger and Holland |

HHG | Heller-Heller-Gorfine Tests of Independence and Equality of Distributions |

hhh4contacts | Age-Structured Spatio-Temporal Models for Infectious Disease Counts |

hhi | Calculate and Visualize the Herfindahl-Hirschman Index |

hht | The Hilbert-Huang Transform: Tools and Methods |

HI | Simulation from distributions supported by nested hyperplanes |

HiCfeat | Multiple Logistic Regression for 3D Chromatin Domain Border Analysis |

HiClimR | Hierarchical Climate Regionalization |

HiCseg | Detection of domains in HiC data |

hiddenf | The All-Configurations, Maximum-Interaction F-Test for Hidden Additivity |

HiddenMarkov | Hidden Markov Models |

HiDimDA | High Dimensional Discriminant Analysis |

hier.part | Hierarchical Partitioning |

hierarchicalDS | Functions to Perform Hierarchical Analysis of Distance Sampling Data |

hierarchicalSets | Set Data Visualization Using Hierarchies |

hierband | Convex Banding of the Covariance Matrix |

hierBipartite | Bipartite Graph-Based Hierarchical Clustering |

hierDiversity | Hierarchical Multiplicative Partitioning of Complex Phenotypes |

HierDpart | Partitioning Hierarchical Diversity and Differentiation Across Metrics and Scales, from Genes to Ecosystems |

hierfstat | Estimation and Tests of Hierarchical F-Statistics |

hierNet | A Lasso for Hierarchical Interactions |

HierO | A graphical user interface for calculating power and sample size for hierarchical data |

hiertest | Convex Hierarchical Testing of Interactions |

HIest | Hybrid index estimation |

highcharter | A Wrapper for the 'Highcharts' Library |

highD2pop | Two-Sample Tests for Equality of Means in High Dimension |

highDmean | Testing Two-Sample Mean in High Dimension |

HighestMedianRules | Implementation of Voting Rules Electing the Candidate with Highest Median Grade |

highfrequency | Tools for Highfrequency Data Analysis |

highlight | Syntax Highlighter |

highlightHTML | Highlight HTML Text and Tables |

highmean | Two-Sample Tests for High-Dimensional Mean Vectors |

highr | Syntax Highlighting for R Source Code |

highSCREEN | High-Throughput Screening for Plate Based Essays |

highTtest | Simultaneous Critical Values for t-Tests in Very High Dimensions |

higlasso | Hierarchical Integrative Group LASSO |

higrad | Statistical Inference for Online Learning and Stochastic Approximation via HiGrad |

hilbertSimilarity | Hilbert Similarity Index for High Dimensional Data |

hildareadR | Extract Variables from HILDA |

hilldiv | Integral Analysis of Diversity Based on Hill Numbers |

hillmakeR | Perform occupancy analysis |

hillR | Diversity Through Hill Numbers |

HiLMM | Estimation of Heritability in Linear Mixed Models |

HIMA | High-Dimensional Mediation Analysis |

himach | High Mach Finds Routes for Supersonic Aircraft |

hindex | Simulating the Development of h-Index Values |

hindexcalculator | H-Index Calculator using Data from a Web of Science (WoS) Citation Report |

hint | Tools for hypothesis testing based on Hypergeometric Intersection distributions |

hiphop | Parentage Assignment using Bi-Allelic Genetic Markers |

hiPOD | hierarchical Pooled Optimal Design |

hipread | Read Hierarchical Fixed Width Files |

HiResTEC | Non-Targeted Fluxomics on High-Resolution Mass-Spectrometry Data |

hIRT | Hierarchical Item Response Theory Models |

hisse | Hidden State Speciation and Extinction |

HistDat | Summary Statistics for Histogram/Count Data |

HistData | Data Sets from the History of Statistics and Data Visualization |

HistDAWass | Histogram-Valued Data Analysis |

histmdl | A Most Informative Histogram-Like Model |

histogram | Construction of Regular and Irregular Histograms with Different Options for Automatic Choice of Bins |

HistogramTools | Utility Functions for R Histograms |

historydata | Data Sets for Historians |

histry | Enhanced Command History Tracking for R Sessions and Dynamic Documents |

hit | Hierarchical Inference Testing |

hitandrun | "Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes |

HIV.LifeTables | HIV calibrated model life tables for countries with generalized HIV epidemics |

hive | Hadoop InteractiVE |

HiveR | 2D and 3D Hive Plots for R |

hJAM | Hierarchical Joint Analysis of Marginal Summary Statistics |

HK80 | Conversion Tools for HK80 Geographical Coordinate System |

hkclustering | Ensemble Clustering using K Means and Hierarchical Clustering |

hkdatasets | Datasets Related to Hong Kong |

hkevp | Spatial Extreme Value Analysis with the Hierarchical Model of Reich and Shaby (2012) |

hkex.api | API to Retrieve Data from Hong Kong Stock Exchange |

HKprocess | Hurst-Kolmogorov Process |

hlaR | Tools for HLA Data |

hlidacr | Access Data from the 'Hlídač Státu' API |

HLMdiag | Diagnostic Tools for Hierarchical (Multilevel) Linear Models |

HLSM | Hierarchical Latent Space Network Model |

HMB | Hierarchical Model-Based Estimation Approach |

hmclearn | Fit Statistical Models Using Hamiltonian Monte Carlo |

HMDHFDplus | Read Human Mortality Database and Human Fertility Database Data from the Web |

hmeasure | The H-Measure and Other Scalar Classification Performance Metrics |

hmgm | High-Dimensional Mixed Graphical Models Estimation |

hmi | Hierarchical Multiple Imputation |

Hmisc | Harrell Miscellaneous |

hmlasso | Lasso with High Missing Rate |

HMM | HMM - Hidden Markov Models |

hmm.discnp | Hidden Markov Models with Discrete Non-Parametric Observation Distributions |

hmma | Constructs Asymmetric Hidden Markov Models |

HMMCont | Hidden Markov Model for Continuous Observations Processes |

HMMcopula | Markov Regime Switching Copula Models Estimation and Goodness of Fit |

HMMEsolver | A Fast Solver for Henderson Mixed Model Equation via Row Operations |

HMMextra0s | Hidden Markov Models with Extra Zeros |

hmmm | Hierarchical Multinomial Marginal Models |

HMMmlselect | Determine the Number of States in Hidden Markov Models via Marginal Likelihood |

HMMpa | Analysing Accelerometer Data Using Hidden Markov Models |

HMP | Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP |

HMPTrees | Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data |

HMR | Flux Estimation with Static Chamber Data |

hms | Pretty Time of Day |

Hmsc | Hierarchical Model of Species Communities |

hmstimer | 'hms' Based Timer |

HMVD | Group Association Test using a Hidden Markov Model |

hNMF | Hierarchical Non-Negative Matrix Factorization |

hnp | Half-Normal Plots with Simulation Envelopes |

hoa | Higher Order Likelihood Inference |

hoardeR | Collect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices |

hoardr | Manage Cached Files |

hockeystick | Download and Visualize Essential Climate Change Data |

holdem | Texas Holdem Simulator |

Holidays | Holiday and Half-Day Data, for Use with the 'TimeWarp' Package |

holodeck | A Tidy Interface for Simulating Multivariate Data |

homals | Gifi Methods for Optimal Scaling |

homeR | Useful Functions for Building Physics |

Homeric | Doughnut Plots |

hommel | Methods for Closed Testing with Simes Inequality, in Particular Hommel's Method |

homologene | Quick Access to Homologene and Gene Annotation Updates |

homomorpheR | Homomorphic Computations in R |

homtest | Homogeneity tests for Regional Frequency Analysis |

hopbyhop | Transmissions and Receptions in a Hop by Hop Network |

hopit | Hierarchical Ordered Probit Models with Application to Reporting Heterogeneity |

horizon | Horizon Search Algorithm |

HoRM | Supplemental Functions and Datasets for "Handbook of Regression Methods" |

hornpa | Horn's (1965) Test to Determine the Number of Components/Factors |

horserule | Flexible Non-Linear Regression with the HorseRule Algorithm |

horseshoe | Implementation of the Horseshoe Prior |

horseshoenlm | Nonlinear Regression using Horseshoe Prior |

hot.deck | Multiple Hot-Deck Imputation |

Hotelling | Hotelling's T^2 Test and Variants |

hotspot | Software Hotspot Analysis |

hotspots | Hot Spots |

housingData | U.S. Housing Data from 2008 to 2016 |

hover | CSS Animations for 'shiny' Button Elements |

howmany | A lower bound for the number of correct rejections |

hpa | Distributions Hermite Polynomial Approximation |

hpackedbubble | Create Split Packed Bubble Charts |

HPbayes | Heligman Pollard mortality model parameter estimation using Bayesian Melding with Incremental Mixture Importance Sampling |

hpcwld | High Performance Cluster Models Based on Kiefer-Wolfowitz Recursion |

hpiR | House Price Indexes |

HPLB | High-Probability Lower Bounds for the Total Variance Distance |

hpoPlot | Functions for Plotting HPO Terms |

hqmisc | Miscellaneous convenience functions and dataset |

hqreg | Regularization Paths for Lasso or Elastic-Net Penalized Huber Loss Regression and Quantile Regression |

hR | Toolkit for Data Analytics in Human Resources |

hrbrthemes | Additional Themes, Theme Components and Utilities for 'ggplot2' |

hrcomprisk | Nonparametric Assessment Between Competing Risks Hazard Ratios |

hrIPW | Hazard Ratio Estimation using Cox Model Weighted by the Estimated Propensity Score |

HRM | High-Dimensional Repeated Measures |

HRM.curve | High-Resolution Melting (HRM) Curve Analysis |

HRW | Datasets, Functions and Scripts for Semiparametric Regression Supporting Harezlak, Ruppert & Wand (2018) |

HS | Homogenous Segmentation for Spatial Lines Data |

HSAR | Hierarchical Spatial Autoregressive Model |

HSAUR | A Handbook of Statistical Analyses Using R (1st Edition) |

HSAUR2 | A Handbook of Statistical Analyses Using R (2nd Edition) |

HSAUR3 | A Handbook of Statistical Analyses Using R (3rd Edition) |

hscovar | Calculation of Covariance Between Markers for Half-Sib Families |

hsdar | Manage, Analyse and Simulate Hyperspectral Data |

HSDiC | Homogeneity and Sparsity Detection Incorporating Prior Constraint Information |

hSDM | Hierarchical Bayesian Species Distribution Models |

hse | The hse Distribution |

hsicCCA | Canonical Correlation Analysis based on Kernel Independence Measures |

hsm | A Path-Based BCD for Proximal Function of Latent Group Lasso |

hsmm | Hidden Semi Markov Models |

hsphase | Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data |

HSPOR | Hidden Smooth Polynomial Regression for Rupture Detection |

hsrecombi | Estimation of Recombination Rate and Maternal LD in Half-Sibs |

hsstan | Hierarchical Shrinkage Stan Models for Biomarker Selection |

htdp | Horizontal Time Dependent Positioning |

htestClust | Reweighted Marginal Hypothesis Tests for Clustered Data |

HTLR | Bayesian Logistic Regression with Heavy-Tailed Priors |

htm2txt | Convert Html into Text |

html2R | Convert 'HTML' to 'R' with a 'Shiny' App |

html5 | Generates HTML Tag Strings for HTML5 Elements Included in Mozilla's Documentation of HTML5 |

htmldf | Simple Scraping and Tidy Webpage Summaries |

htmltab | Assemble Data Frames from HTML Tables |

htmlTable | Advanced Tables for Markdown/HTML |

htmltidy | Tidy Up and Test XPath Queries on HTML and XML Content |

htmltools | Tools for HTML |

HTMLUtils | Facilitates Automated HTML Report Creation |

htmlwidgets | HTML Widgets for R |

htree | Historical Tree Ensembles for Longitudinal Data |

hts | Hierarchical and Grouped Time Series |

HTSCluster | Clustering High-Throughput Transcriptome Sequencing (HTS) Data |

htsr | Hydro-Meteorology Time-Series |

HTSSIP | High Throughput Sequencing of Stable Isotope Probing Data Analysis |

httk | High-Throughput Toxicokinetics |

httpcache | Query Cache for HTTP Clients |

httpcode | 'HTTP' Status Code Helper |

httpgd | A 'HTTP' Server Graphics Device |

httping | 'Ping' 'URLs' to Time 'Requests' |

httpproblems | Report Errors in Web Applications with 'Problem Details' (RFC 7807) |

httpRequest | Basic HTTP Request |

httptest | A Test Environment for HTTP Requests |

httpuv | HTTP and WebSocket Server Library |

httr | Tools for Working with URLs and HTTP |

hues | Distinct Colour Palettes Based on 'iwanthue' |

huge | High-Dimensional Undirected Graph Estimation |

HUM | compute HUM value and visualize ROC curves |

humanFormat | Human-friendly formatting functions |

humaniformat | A Parser for Human Names |

humanize | Create Values for Human Consumption |

humanleague | Synthetic Population Generator |

humidity | Calculate Water Vapor Measures from Temperature and Dew Point |

hunspell | High-Performance Stemmer, Tokenizer, and Spell Checker |

HURDAT | Hurricane Re-Analysis Project |

hurdlr | Zero-Inflated and Hurdle Modelling Using Bayesian Inference |

hurricaneexposure | Explore and Map County-Level Hurricane Exposure in the United States |

hutils | Miscellaneous R Functions and Aliases |

hutilscpp | Miscellaneous Functions in C++ |

huxtable | Easily Create and Style Tables for LaTeX, HTML and Other Formats |

HW.pval | Testing Hardy-Weinberg Equilibrium for Multiallelic Genes |

hwde | Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci |

HWEBayes | Bayesian investigation of Hardy-Weinberg Equilibrium via estimation and testing |

HWEintrinsic | Objective Bayesian Testing for the Hardy-Weinberg Equilibrium Problem |

hwordcloud | Rendering Word Clouds |

hwriter | HTML Writer - Outputs R objects in HTML format |

hwwntest | Tests of White Noise using Wavelets |

hybridEnsemble | Build, Deploy and Evaluate Hybrid Ensembles |

HybridMC | Implementation of the Hybrid Monte Carlo and Multipoint Hybrid Monte Carlo sampling techniques |

hybridModels | An R Package for the Stochastic Simulation of Disease Spreading in Dynamic Networks |

HydeNet | Hybrid Bayesian Networks Using R and JAGS |

hydra | Hyperbolic Embedding |

hydraulics | Basic Pipe and Open Channel Hydraulics |

hydroApps | Tools and models for hydrological applications |

HydroCode | Hydrological Codes |

hydrogeo | Groundwater Data Presentation and Interpretation |

hydroGOF | Goodness-of-Fit Functions for Comparison of Simulated and Observed Hydrological Time Series |

HydroMe | Estimating Water Retention and Infiltration Model Parameters using Experimental Data |

hydroPSO | Particle Swarm Optimisation, with Focus on Environmental Models |

hydroscoper | Interface to the Greek National Data Bank for Hydrometeorological Information |

hydrostats | Hydrologic Indices for Daily Time Series Data |

hydroToolkit | Hydrological Tools for Handling Hydro-Meteorological Data from Argentina and Chile |

hydroTSM | Time Series Management, Analysis and Interpolation for Hydrological Modelling |

hyfo | Hydrology and Climate Forecasting |

hyper.fit | Generic N-Dimensional Hyperplane Fitting with Heteroscedastic Covariant Errors and Intrinsic Scatter |

hyper2 | The Hyperdirichlet Distribution, Mark 2 |

HyperbolicDist | The hyperbolic distribution |

hypercube | Organizing Data in Hypercubes |

HyperG | Hypergraphs in R |

hypergate | Machine Learning of Hyperrectangular Gating Strategies for High-Dimensional Cytometry |

hypergeo | The Gauss Hypergeometric Function |

HypergeoMat | Hypergeometric Function of a Matrix Argument |

hyperoverlap | Overlap Detection in n-Dimensional Space |

hypersampleplan | Attribute Sampling Plan with Exact Hypergeometric Probabilities using Chebyshev Polynomials |

hyperSMURF | Hyper-Ensemble Smote Undersampled Random Forests |

hyperSpec | Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...) |

hypervolume | High Dimensional Geometry and Set Operations Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls |

HyPhy | Macroevolutionary phylogentic analysis of species trees and gene trees |

hypothesestest | Confidence Intervals and Tests of Statistical Hypotheses |

hypothesisr | Wrapper for the 'Hypothes.is' Web Annotation Service |

hypr | Hypothesis Matrix Translation |

HyRiM | Multicriteria Risk Management using Zero-Sum Games with Vector-Valued Payoffs that are Probability Distributions |

HYRISK | Hybrid Methods for Addressing Uncertainty in RISK Assessments |

hySpc.testthat | 'testthat' Unit Test Enhancements |

hysteresis | Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses |

hystReet | Get Pedestrian Frequency Data from the 'Hystreet' Project |

hzar | Hybrid Zone Analysis using R |

i2dash | Iterative and Interactive Dashboards |

i2extras | Functions to Work with 'incidence2' Objects |

IAbin | Plotting N-T Plane for Decision on Performing an Interim Analysis |

IAcsSPCR | Data and Functions for "An Intro. to Accept. Samp. & SPC/R" |

iAdapt | Two-Stage Adaptive Dose-Finding Clinical Trial Design |

iadf | Analysis of Intra Annual Density Fluctuations |

iai | Interface to 'Interpretable AI' Modules |

ialiquor | Monthly Iowa Liquor Sales Summary |

IalsaSynthesis | Synthesizing Information Across Collaborating Research |

iAR | Irregularly Observed Autoregressive Models |

iarm | Item Analysis in Rasch Models |

IASD | Model Selection for Index of Asymmetry Distribution |

IAT | Cleaning and Visualizing Implicit Association Test (IAT) Data |

IATanalytics | Compute Effect Sizes and Reliability for Implicit Association Test (IAT) Data |

IATScore | Scoring Algorithm for the Implicit Association Test (IAT) |

IATscores | Implicit Association Test Scores Using Robust Statistics |

ib | Bias Correction via Iterative Bootstrap |

iBATCGH | Integrative Bayesian Analysis of Transcriptomic and CGH Data |

ibawds | Functions and Datasets for the Data Science Course at IBAW |

ibb | R Wrapper for Istanbul Municipality Open Data Portal |

IBCF.MTME | Item Based Collaborative Filtering for Multi-Trait and Multi-Environment Data |

ibd | Incomplete Block Designs |

IBDhaploRtools | Functions for the Analysis of IBD Haplo Output |

IBDLabels | Convert Between Different IBD-State Labelling Schemes |

ibdreg | Regression Methods for IBD Linkage with Covariates |

IBDsim | Simulation of Chromosomal Regions Shared by Family Members |

ibdsim2 | Simulation of Chromosomal Regions Shared by Family Members |

ibeemd | Irregular-lattice based ensemble empirical mode decomposition |

ibelief | Belief Function Implementation |

ibm | Individual Based Models in R |

ibmAcousticR | Connect to Your 'IBM Acoustic' Data |

ibmcraftr | Toolkits to Develop Individual-Based Models in Infectious Disease |

ibmdbR | IBM in-Database Analytics for R |

IBMPopSim | Individual Based Model Population Simulation |

ibmsunburst | Generate Personality Insights Sunburst Diagrams |

Iboot | Iboot: iterated bootstrap tests and confidence sets |

ibr | Iterative Bias Reduction |

iBreakDown | Model Agnostic Instance Level Variable Attributions |

IBrokers | R API to Interactive Brokers Trader Workstation |

ibs | Integral of B-Spline Functions |

iBST | Improper Bagging Survival Tree |

ic.infer | Inequality Constrained Inference in Linear Normal Situations |

iC10 | A Copy Number and Expression-Based Classifier for Breast Tumours |

iC10TrainingData | Training Datasets for iC10 Package |

IC2 | Inequality and Concentration Indices and Curves |

ic50 | Standardized high-throughput evaluation of cell-based compound screens |

ica | Independent Component Analysis |

ICAFF | Imperialist Competitive Algorithm |

ical | 'iCalendar' Parsing |

iCAMP | Infer Community Assembly Mechanisms by Phylogenetic-Bin-Based Null Model Analysis |

ICAMS | In-Depth Characterization and Analysis of Mutational Signatures ('ICAMS') |

ICAOD | Optimal Designs for Nonlinear Statistical Models by Imperialist Competitive Algorithm (ICA) |

icapca | Mixed ICA/PCA |

iCARH | Integrative Conditional Autoregressive Horseshoe Model |

icarus | Calibrates and Reweights Units in Samples |

ICBayes | Bayesian Semiparametric Models for Interval-Censored Data |

ICBioMark | Data-Driven Design of Targeted Gene Panels for Estimating Immunotherapy Biomarkers |

ICC | Facilitating Estimation of the Intraclass Correlation Coefficient |

ICC.Sample.Size | Calculation of Sample Size and Power for ICC |

ICcalib | Cox Model with Interval-Censored Starting Time of a Covariate |

iccbeta | Multilevel Model Intraclass Correlation for Slope Heterogeneity |

ICCbin | Facilitates Clustered Binary Data Generation, and Estimation of Intracluster Correlation Coefficient (ICC) for Binary Data |

iccde | Computation of the Double-Entry Intraclass Correlation |

ICcforest | An Ensemble Method for Interval-Censored Survival Data |

icd.data | International Classifcation of Diseases (ICD) Data |

ICD10gm | Metadata Processing for the German Modification of the ICD-10 Coding System |

icdGLM | EM by the Method of Weights for Incomplete Categorical Data in Generlized Linear Models |

icdpicr | 'ICD' Programs for Injury Categorization in R |

ICDS | Identification of Cancer Dysfunctional Subpathway by Integrating DNA Methylation, Copy Number Variation, and Gene Expression Data |

ICE | Iterated Conditional Expectation |

ICEbox | Individual Conditional Expectation Plot Toolbox |

IceCast | Apply Statistical Post-Processing to Improve Sea Ice Predictions |

ICEinfer | Incremental Cost-Effectiveness Inference using Two Unbiased Samples |

iCellR | Analyzing High-Throughput Single Cell Sequencing Data |

icenReg | Regression Models for Interval Censored Data |

icensBKL | Accompanion to the Book on Interval Censoring by Bogaerts, Komarek, and Lesaffre |

icensmis | Study Design and Data Analysis in the Presence of Error-Prone Diagnostic Tests and Self-Reported Outcomes |

icesAdvice | Functions Related to ICES Advice |

icesDatras | DATRAS Trawl Survey Database Web Services |

icesTAF | Functions to Support the ICES Transparent Assessment Framework |

icesVocab | ICES Vocabularies Database Web Services |

ICGE | Estimation of number of clusters and identification of atypical units |

ICGOR | Fit Generalized Odds Rate Hazards Model with Interval Censored Data |

iCiteR | A Minimal Wrapper Around NIH's 'iCite' API |

iClick | A Button-Based GUI for Financial and Economic Data Analysis |

iCluster | Integrative clustering of multiple genomic data types |

icmm | Empirical Bayes Variable Selection via ICM/M Algorithm |

ICODS | Data Analysis for ODS and Case-Cohort Designs with Interval-Censoring |

ICON | Provides Easy Access to Complex Systems Datasets |

iconr | Graphical and Spatial Analysis for Prehistoric Iconography |

icosa | Global Triangular and Penta-Hexagonal Grids Based on Tessellated Icosahedra |

icpsrdata | Reproducible Data Retrieval from the ICPSR Archive |

icr | Compute Krippendorff's Alpha |

ICRanks | Simultaneous Confidence Intervals for Ranks |

icrf | Interval Censored Recursive Forests |

icRSF | A Modified Random Survival Forest Algorithm |

ICS | Tools for Exploring Multivariate Data via ICS/ICA |

ICSKAT | Interval-Censored Sequence Kernel Association Test |

ICSNP | Tools for Multivariate Nonparametrics |

ICSOutlier | Outlier Detection Using Invariant Coordinate Selection |

ICSS | ICSS Algorithm by Inclan/Tiao (1994) |

ICSShiny | ICS via a Shiny Application |

ICSsmoothing | Data Smoothing by Interpolating Cubic Splines |

ICsurv | A package for semiparametric regression analysis of interval-censored data |

icsw | Inverse Compliance Score Weighting |

ICtest | Estimating and Testing the Number of Interesting Components in Linear Dimension Reduction |

ICV | Indirect Cross-Validation (ICV) for Kernel Density Estimation |

idar | Individual Diversity-Area Relationships |

idbg | R debugger |

idbr | R Interface to the US Census Bureau International Data Base API |

IDCard | Update Chinese ID Card Number to Eighteen Digits |

IDE | Integro-Difference Equation Spatio-Temporal Models |

ideamdb | Easy Manipulation of IDEAM's Climatological Data |

idefix | Efficient Designs for Discrete Choice Experiments |

idem | Inference in Randomized Controlled Trials with Death and Missingness |

idendr0 | Interactive Dendrograms |

identity | Jacquard Condensed Coefficients of Identity |

ideq | Bayesian Dynamic Spatio-Temporal Models, Including the Integrodifference Equation Model |

ider | Various Methods for Estimating Intrinsic Dimension |

IDetect | Isolate-Detect Methodology for Multiple Change-Point Detection |

IDF | Estimation and Plotting of IDF Curves |

iDINGO | Integrative Differential Network Analysis in Genomics |

idiogramFISH | Shiny App. Idiograms with Marks and Karyotype Indices |

idm | Incremental Decomposition Methods |

IDmeasurer | Assessment of Individual Identity in Animal Signals |

IDmining | Intrinsic Dimension for Data Mining |

idmodelr | Infectious Disease Model Library and Utilities |

idmTPreg | Regression Model for Progressive Illness Death Data |

iDOS | Integrated Discovery of Oncogenic Signatures |

IDPmisc | 'Utilities of Institute of Data Analyses and Process Design (www.zhaw.ch/idp)' |

IDPSurvival | Imprecise Dirichlet Process for Survival Analysis |

idr | Irreproducible discovery rate |

ids | Generate Random Identifiers |

IDSA | An Interactive Detector for Spatial Associations |

idx2r | Convert Files to and from IDX Format to Vectors, Matrices and Arrays |

iDynoR | R Analysis package for iDynoMiCS Simulation Results |

ie2misc | Irucka Embry's Miscellaneous USGS Functions |

ieeeround | Functions to set and get the IEEE rounding mode |

iemisc | Irucka Embry's Miscellaneous Functions |

iemiscdata | Irucka Embry's Miscellaneous Data Collection |

iemisctext | Irucka Embry's Miscellaneous Text Collection |

IETD | Inter-Event Time Definition |

ifa | Independent Factor Analysis |

IFAA | Robust Analysis for Absolute Abundance in Microbiome |

iFad | An integrative factor analysis model for drug-pathway association inference |

ifaTools | Toolkit for Item Factor Analysis with 'OpenMx' |

IFC | Tools for Imaging Flow Cytometry |

ifctools | Italian Fiscal Code ('Codice Fiscale') Utilities |

iForecast | Machine Learning Time Series Forecasting |

IFP | Identifying Functional Polymorphisms |

ifs | Iterated Function Systems |

ifultools | Insightful Research Tools |

ig.vancouver.2014.topcolour | Instagram 2014 Vancouver Top Colour Dataset |

IgAScores | Score Taxon-Level IgA Binding in IgA-Seq Experiments |

iGasso | Statistical Tests and Utilities for Genetic Association |

igate | Guided Analytics for Testing Manufacturing Parameters |

IGG | Inverse Gamma-Gamma |

iglu | Interpreting Glucose Data from Continuous Glucose Monitors |

igoR | Intergovernmental Organizations Database |

IgorR | Read Binary Files Saved by 'Igor Pro' (Including 'Neuromatic' Data) |

igraph | Network Analysis and Visualization |

igraphdata | A Collection of Network Data Sets for the 'igraph' Package |

igraphinshiny | Use 'shiny' to Demo 'igraph' |

iGraphMatch | Tools Graph Matching |

igraphtosonia | Convert iGraph graps to SoNIA .son files |

iGSEA | Integrative Gene Set Enrichment Analysis Approaches |

IGST | Informative Gene Selection Tool |

iheatmapr | Interactive, Complex Heatmaps |

ihpdr | Download Data from the International House Price Database |

IHSEP | Inhomogeneous Self-Exciting Process |

iilasso | Independently Interpretable Lasso |

iIneq | Computing Individual Components of the Gini and the Theil Indices |

ijtiff | Comprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files |

ilc | Lee-Carter Mortality Models using Iterative Fitting Algorithms |

ILS | Interlaboratory Study |

imabc | Incremental Mixture Approximate Bayesian Computation (IMABC) |

IMAGE | Integrated Methylation QTL Mapping and Allele-Specific Analysis |

image.binarization | Binarize Images for Enhancing Optical Character Recognition |

image.CannyEdges | Implementation of the Canny Edge Detector for Images |

image.ContourDetector | Implementation of the Unsupervised Smooth Contour Line Detection for Images |

image.CornerDetectionF9 | Find Corners in Digital Images with FAST-9 |

image.CornerDetectionHarris | Implementation of the Harris Corner Detection for Images |

image.dlib | Image Processing Functionality using the 'dlib' Package |

image.libfacedetection | Convolutional Neural Network for Face Detection |

image.LineSegmentDetector | Detect Line Segments in Images |

image.Otsu | Otsu's Image Segmentation Method |

image.textlinedetector | Segment Images in Text Lines and Words |

imageData | Aids in Processing and Plotting Data from a Lemna-Tec Scananalyzer |

imagefluency | Image Statistics Based on Processing Fluency |

imagefx | Extract Features from Images |

imager | Image Processing Library Based on 'CImg' |

imagerExtra | Extra Image Processing Library Based on 'imager' |

IMaGES | Independent Multiple-Sample Greedy Equivalence Search Implementation |

imageviewer | Simple 'htmlwidgets' Image Viewer with WebGL Brightness/Contrast |

imagine | IMAGing engINEs, Tools for Application of Image Filters to Data Matrices |

ImaginR | Delimit and Characterize Color Phenotype of the Pearl Oyster |

IMak | Item Maker |

Imap | Interactive Mapping |

imbalance | Preprocessing Algorithms for Imbalanced Datasets |

imbibe | A Pipe-Friendly Image Calculator |

imdbapi | Get Movie, Television Data from the 'imdb' Database |

IMEC | Ising Model of Explanatory Coherence |

iMediate | Likelihood Methods for Mediation Analysis |

IMFData | R Interface for International Monetary Fund(IMF) Data API |

imfr | Download Data from the International Monetary Fund's Data API |

imgpalr | Create Color Palettes from Images |

imgrec | An Interface for Image Recognition |

imguR | An Imgur.com API Client Package |

IMIFA | Infinite Mixtures of Infinite Factor Analysers and Related Models |

IMIX | Gaussian Mixture Model for Multi-Omics Data Integration |

iml | Interpretable Machine Learning |

IMmailgun | Send Emails using 'Mailgun' |

immcp | Candidate Prescriptions Discovery Based on Pathway Fingerprint |

immer | Item Response Models for Multiple Ratings |

Immigrate | Iterative Max-Min Entropy Margin-Maximization with Interaction Terms for Feature Selection |

immuneSIM | Tunable Simulation of B- And T-Cell Receptor Repertoires |

IMP | Interactive Model Performance Evaluation |

imp4p | Imputation for Proteomics |

IMPACT | The Impact of Items |

ImpactEffectsize | Calculation and Visualization of the Impact Effect Size Measure |

impactflu | Quantification of Population-Level Impact of Vaccination |

impimp | Imprecise Imputation for Statistical Matching |

implicitMeasures | Compute Scores for Different Implicit Measures |

implied | Convert Bookmaker Odds to Probabilities |

implyr | R Interface for Apache Impala |

import | An Import Mechanism for R |

importar | Enables Importing/Loading of Packages or Functions While Creating an Alias for Them |

ImportExport | Import and Export Data |

importinegi | Download and Manage Open Data from INEGI |

impressionist.colors | Impressionism's Color Palettes |

imptree | Classification Trees with Imprecise Probabilities |

imputeFin | Imputation of Financial Time Series with Missing Values and/or Outliers |

imputeLCMD | A collection of methods for left-censored missing data imputation |

imputeMDR | The Multifactor Dimensionality Reduction (MDR) Analysis for Incomplete Data |

imputeMissings | Impute Missing Values in a Predictive Context |

imputeMulti | Imputation Methods for Multivariate Multinomial Data |

imputePSF | Impute Missing Data in Time Series Data with PSF Based Method |

imputeR | A General Multivariate Imputation Framework |

ImputeRobust | Robust Multiple Imputation with Generalized Additive Models for Location Scale and Shape |

imputeTestbench | Test Bench for the Comparison of Imputation Methods |

imputeTS | Time Series Missing Value Imputation |

imputeYn | Imputing the Last Largest Censored Observation(s) Under Weighted Least Squares |

iMRMC | Multi-Reader, Multi-Case Analysis Methods (ROC, Agreement, and Other Metrics) |

imsig | Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours |

IMTest | Information Matrix Test for Generalized Partial Credit Models |

in2extRemes | Into the extRemes Package |

inaparc | Initialization Algorithms for Partitioning Cluster Analysis |

inbreedR | Analysing Inbreeding Based on Genetic Markers |

inca | Integer Calibration |

incadata | Recognize and Handle Data in Formats Used by Swedish Cancer Centers |

incase | Pipe-Friendly Vector Replacement with Case Statements |

INCATome | Internal Control Analysis of Translatome Studies by Microarrays |

IncDTW | Incremental Calculation of Dynamic Time Warping |

incgraph | Incremental Graphlet Counting for Network Optimisation |

incidence | Compute, Handle, Plot and Model Incidence of Dated Events |

incidence2 | Compute, Handle and Plot Incidence of Dated Events |

incidental | Implements Empirical Bayes Incidence Curves |

IncomPair | Comparison of Means for the Incomplete Paired Data |

incR | Analysis of Incubation Data |

inctools | Incidence Estimation Tools |

indelmiss | Insertion Deletion Analysis While Accounting for Possible Missing Data |

independence | Fast Rank-Based Independence Testing |

IndepTest | Nonparametric Independence Tests Based on Entropy Estimation |

IndexConstruction | Index Construction for Time Series Data |

IndexNumber | Index Numbers in Social Sciences |

IndexNumR | Index Number Calculation |

IndianTaxCalc | Indian Income Tax Calculator |

indicspecies | Relationship Between Species and Groups of Sites |

indiedown | Individual R Markdown Templates |

indirect | Elicitation of Independent Conditional Means Priors for Generalised Linear Models |

InDisc | Obtaining and Estimating Unidimensional IRT Dual Models |

IndTestPP | Tests of Independence and Analysis of Dependence Between Point Processes in Time |

inegiR | Integrate INEGI’s (Mexican Stats Office) API with R |

ineq | Measuring Inequality, Concentration, and Poverty |

ineqJD | Inequality Joint Decomposition |

iNEXT | Interpolation and Extrapolation for Species Diversity |

InfDim | Infine-dimensional model (IDM) to analyse phenotypic variation in growth trajectories |

infer | Tidy Statistical Inference |

inference | Functions to extract inferential values of a fitted model object |

InferenceSMR | Inference about the standardized mortality ratio when evaluating the effect of a screening program on survival |

inferference | Methods for Causal Inference with Interference |

inferr | Inferential Statistics |

infinitefactor | Bayesian Infinite Factor Models |

InfiniumPurify | Estimate and Account for Tumor Purity in Cancer Methylation Data Analysis |

infix | Basic Infix Binary Operators |

Inflation | Core Inflation |

Inflect | Melt Curve Fitting and Melt Shift Analysis |

inflection | Finds the Inflection Point of a Curve |

influence.ME | Tools for Detecting Influential Data in Mixed Effects Models |

influence.SEM | Case Influence in Structural Equation Models |

influenceAUC | Identify Influential Observations in Binary Classification |

influenceR | Software Tools to Quantify Structural Importance of Nodes in a Network |

influential | Identification and Classification of the Most Influential Nodes |

influxdbr | R Interface to InfluxDB |

infoDecompuTE | Information Decomposition of Two-Phase Experiments |

Information | Data Exploration with Information Theory (Weight-of-Evidence and Information Value) |

InformationValue | Performance Analysis and Companion Functions for Binary Classification Models |

InformativeCensoring | Multiple Imputation for Informative Censoring |

informR | Sequence Statistics for Relational Event Models |

infotheo | Information-Theoretic Measures |

InfoTrad | Calculates the Probability of Informed Trading (PIN) |

infra | An Infrastructure Proxy Function |

infraFDTD.assist | IO Help for infraFDTD Model |

Infusion | Inference Using Simulation |

infutil | Information Utility |

ingredients | Effects and Importances of Model Ingredients |

ini | Read and Write '.ini' Files |

injectoR | R Dependency Injection |

InjurySeverityScore | Translate ICD-9 into Injury Severity Score |

INLABMA | Bayesian Model Averaging with INLA |

inlabru | Bayesian Latent Gaussian Modelling using INLA and Extensions |

INLAMSM | Multivariate Spatial Models with 'INLA' |

inldata | Collection of Datasets for the USGS-INL Aquifer Monitoring Networks |

inline | Functions to Inline C, C++, Fortran Function Calls from R |

inlinedocs | Convert Inline Comments to Documentation |

inlmisc | Miscellaneous Functions for the USGS INL Project Office |

inops | Infix Operators for Detection, Subsetting and Replacement |

inpdfr | Analyse Text Documents Using Ecological Tools |

inplace | In-place Operators for R |

InPosition | Inference Tests for ExPosition |

INQC | Quality Control of Climatological Daily Time Series |

insane | INsulin Secretion ANalysEr |

insect | Informatic Sequence Classification Trees |

insee | Tools to Easily Download Data from INSEE BDM Database |

insight | Easy Access to Model Information for Various Model Objects |

InSilicoVA | Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm |

insol | Solar Radiation |

InspectChangepoint | High-Dimensional Changepoint Estimation via Sparse Projection |

inspectdf | Inspection, Comparison and Visualisation of Data Frames |

inspector | Validation of Arguments and Objects in User-Defined Functions |

INSPIRE | Inferring Shared Modules from Multiple Gene Expression Datasets with Partially Overlapping Gene Sets |

install.load | Check, Install and Load CRAN & USGS GRAN Packages |

installr | Using R to Install Stuff on Windows OS (Such As: R, 'Rtools', 'RStudio', 'Git', and More!) |

instaR | Access to Instagram API via R |

insuranceData | A Collection of Insurance Datasets Useful in Risk Classification in Non-life Insurance |

insurancerating | Analytic Insurance Rating Techniques |

intamap | Procedures for Automated Interpolation |

intamapInteractive | Interactive Add-on Functionality for 'intamap' |

IntCal | Radiocarbon Calibration Curves |

intccr | Semiparametric Competing Risks Regression under Interval Censoring |

intcensROC | AUC Estimation of Interval Censored Survival Data |

intdag | Reconstruction of a Directed Acyclic Graph with Interventions |

integIRTy | Integrating Multiple Modalities of High Throughput Assays Using Item Response Theory |

integr | An Implementation of Interaction Graphs of Aleks Jakulin |

IntegrateBs | Integration for B-Spline |

IntegratedJM | Joint Modeling of the Gene-Expression and Bioassay Data, Taking Care of the Effect Due to a Fingerprint Feature |

IntegratedMRF | Integrated Prediction using Uni-Variate and Multivariate Random Forests |

intensegRid | R Wrapper for the Carbon Intensity API |

intensity.analysis | Intensity of Change for Comparing Categorical Maps from Sequential Intervals |

interacCircos | The Visualization of Interactive Circos Plot |

Interact | Tests for marginal interactions in a 2 class response model |

interactionR | Full Reporting of Interaction Analyses |

interactions | Comprehensive, User-Friendly Toolkit for Probing Interactions |

interactionTest | Calculates Critical Test Statistics to Control False Discovery Rates in Marginal Effects Plots |

InteractiveIGraph | interactive network analysis and visualization |

Interatrix | Compute Chi-Square Measures with Corrections |

interep | Interaction Analysis of Repeated Measure Data |

InterfaceqPCR | GUI to Analyse qPCR Results after PMA Treatment or not |

interferenceCI | Exact Confidence Intervals in the Presence of Interference |

interfr | Interference Color Charts for Polarized Light Microscopy |

intergraph | Coercion Routines for Network Data Objects |

interim | Scheduling Interim Analyses in Clinical Trials |

interimApp | App for Scheduling Interim Analyses in Clinical Trials |

interleave | Converts Tabular Data to Interleaved Vectors |

interlineaR | Importing Interlinearized Corpora and Dictionaries as Produced by Descriptive Linguistics Software |

interp | Interpolation Methods |

interplot | Plot the Effects of Variables in Interaction Terms |

Interpol.T | Hourly interpolation of multiple temperature daily series |

interpret | Fit Interpretable Machine Learning Models |

InterpretMSSpectrum | Interpreting High Resolution Mass Spectra |

interpretR | Binary Classifier and Regression Model Interpretation Functions |

InterSIM | Simulation of Inter-Related Genomic Datasets |

InterVA4 | Replicate and Analyse 'InterVA4' |

InterVA5 | Replicate and Analyse 'InterVA5' |

interval | Weighted Logrank Tests and NPMLE for Interval Censored Data |

intervalaverage | Time-Weighted Averaging for Interval Data |

intervals | Tools for Working with Points and Intervals |

IntervalSurgeon | Operating on Integer-Bounded Intervals |

intervcomp | Hypothesis Testing Using the Overlapping Interval Estimates |

interventionalDBN | Interventional Inference for Dynamic Bayesian Networks |

inti | Tools and Statistical Procedures in Plant Science |

intkrige | A Numerical Implementation of Interval-Valued Kriging |

IntLik | Numerical Integration for Integrated Likelihood |

intmed | Mediation Analysis using Interventional Effects |

IntNMF | Integrative Clustering of Multiple Genomic Dataset |

inTrees | Interpret Tree Ensembles |

intRegGOF | Integrated Regression Goodness of Fit |

INTRIGUE | Quantify and Control Reproducibility in High-Throughput Experiments |

intrinsicDimension | Intrinsic Dimension Estimation |

introgress | methods for analyzing introgression between divergent lineages |

intrval | Relational Operators for Intervals |

intRvals | Analysis of Time-Ordered Event Data with Missed Observations |

intsurv | Integrative Survival Modeling |

intsurvbin | Survival and Binary Data Integration |

intsvy | International Assessment Data Manager |

intubate | Interface to Popular R Functions for Data Science Pipelines |

inum | Interval and Enum-Type Representation of Vectors |

invacost | Analyse Biological Invasion Costs with the 'InvaCost' Database |

InvariantCausalPrediction | Invariant Causal Prediction |

InvasionCorrection | Invasion Correction |

invctr | Infix Functions For Vector Operations |

inventorize | Inventory Analytics and Cost Calculations |

Inventorymodel | Inventory Models |

inverseRegex | Reverse Engineers Regular Expression Patterns for R Objects |

investr | Inverse Estimation/Calibration Functions |

invgamma | The Inverse Gamma Distribution |

invGauss | Threshold regression that fits the (randomized drift) inverse Gaussian distribution to survival data |

invLT | Inversion of Laplace-Transformed Functions |

iNZightMR | Tools for Exploring Multiple Response Data |

iNZightPlots | Graphical Tools for Exploring Data with 'iNZight' |

iNZightRegression | Tools for Exploring Regression Models with 'iNZight' |

iNZightTools | Tools for 'iNZight' |

iNZightTS | Time Series for 'iNZight' |

io | A Unified Framework for Input-Output Operations in R |

ioanalysis | Input Output Analysis |

IOHanalyzer | Data Analysis Part of 'IOHprofiler' |

IOHexperimenter | Benchmarking Part of the 'IOHprofiler' |

ioncopy | Calling Copy Number Alterations in Amplicon Sequencing Data |

ionflows | Calculate the Number of Required Flows for Semiconductor Sequencing |

ionr | Test for Indifference of Indicator |

iopsych | Methods for Industrial/Organizational Psychology |

iosmooth | Functions for Smoothing with Infinite Order Flat-Top Kernels |

iotools | I/O Tools for Streaming |

ip2location | Lookup for IP Address Information |

ip2proxy | Lookup for IP Address Proxy Information |

ipa | Convert Between Phonetic Alphabets |

ipaddress | Tidy IP Addresses |

ipADMIXTURE | Iterative Pruning Population Admixture Inference Framework |

ipc | Tools for Message Passing Between Processes |

IPCAPS | Iterative Pruning to Capture Population Structure |

IPCWK | Kendall's Tau Partial Corr. for Survival Trait and Biomarkers |

ipcwswitch | Inverse Probability of Censoring Weights to Deal with Treatment Switch in Randomized Clinical Trials |

IPDFileCheck | Basic Functions to Check Readability, Consistency, and Content of an Individual Participant Data File |

IPDfromKM | Map Digitized Survival Curves Back to Individual Patient Data |

ipdw | Spatial Interpolation by Inverse Path Distance Weighting |

ipeadatar | API Wrapper for 'Ipeadata' |

IPEC | Root Mean Square Curvature Calculation |

ipflasso | Integrative Lasso with Penalty Factors |

ipfp | Fast Implementation of the Iterative Proportional Fitting Procedure in C |

ipfr | List Balancing for Reweighting and Population Synthesis |

ipft | Indoor Positioning Fingerprinting Toolset |

IPLGP | Identification of Parental Lines via Genomic Prediction |

iplots | iPlots - interactive graphics for R |

ipmisc | Miscellaneous Functions for Data Cleaning and Analysis |

ipmr | Fits Integral Projection Models Using an Expression Based Framework |

IPMRF | Intervention in Prediction Measure (IPM) for Random Forests |

IPPP | Inhomogeneous Poisson Point Processes |

ipptoolbox | IPP Toolbox |

ipr | Iterative Proportional Repartition Algorithm |

ipred | Improved Predictors |

iprior | Regression Modelling using I-Priors |

ips | Interfaces to Phylogenetic Software in R |

iptmnetr | Interface to the 'iPTMnet' API |

iptools | Manipulate, Validate and Resolve 'IP' Addresses |

ipumsr | Read 'IPUMS' Extract Files |

IPV | Item Pool Visualization |

ipw | Estimate Inverse Probability Weights |

IPWboxplot | Adapted Boxplot to Missing Observations |

ipwCoxCSV | Inverse Probability Weighted Cox Model with Corrected Sandwich Variance |

ipwErrorY | Inverse Probability Weighted Estimation of Average Treatment Effect with Misclassified Binary Outcome |

IPWpn | Inverse-Propensity-Weighting for Partially Nested Designs |

iq | Protein Quantification in Mass Spectrometry-Based Proteomics |

IQCC | Improved Quality Control Charts |

iqLearn | Interactive Q-Learning |

irace | Iterated Racing for Automatic Algorithm Configuration |

iRafNet | Integrative Random Forest for Gene Regulatory Network Inference |

IRATER | A R Interface for the Instantaneous RATEs (IRATE) Model |

IRCcheck | Irrepresentable Condition Check |

ircor | Correlation Coefficients for Information Retrieval |

IRdisplay | 'Jupyter' Display Machinery |

iRegression | Regression Methods for Interval-Valued Variables |

iRepro | Reproducibility for Interval-Censored Data |

Irescale | Calculate and Rectify Moran's I |

iRF | iterative Random Forests |

irg | Instantaneous Rate of Green Up |

iriR | Global Innovation Through Company Level Data |

IrishDirectorates | A Dynamic Bipartite Latent Space Model to Analyse Irish Companies' Boards from 2003 to 2013 |

IRISMustangMetrics | Statistics and Metrics for Seismic Data |

IRISSeismic | Classes and Methods for Seismic Data Analysis |

IRkernel | Native R Kernel for the 'Jupyter Notebook' |

irlba | Fast Truncated Singular Value Decomposition and Principal Components Analysis for Large Dense and Sparse Matrices |

irr | Various Coefficients of Interrater Reliability and Agreement |

irrCAC | Computing Chance-Corrected Agreement Coefficients (CAC) |

IrregLong | Analysis of Longitudinal Data with Irregular Observation Times |

irrICC | Intraclass Correlations for Quantifying Inter-Rater Reliability |

irrNA | Coefficients of Interrater Reliability – Generalized for Randomly Incomplete Datasets |

IRSF | Interaction Random Survival Forest |

irt | Item Response Theory and Computerized Adaptive Testing Functions |

IRTBEMM | Family of Bayesian EMM Algorithm for Item Response Models |

irtDemo | Item Response Theory Demo Collection |

irtGUI | Item Response Theory Analysis with a Graphic User Interface |

irtoys | A Collection of Functions Related to Item Response Theory (IRT) |

irtplay | Unidimensional Item Response Theory Modeling |

irtProb | Utilities and Probability Distributions Related to Multidimensional Person Item Response Models |

irtrees | Estimation of Tree-Based Item Response Models |

irtreliability | Item Response Theory Reliability |

IRTShiny | Item Response Theory via Shiny |

isa2 | The Iterative Signature Algorithm |

ISAT | Extract Cell Density and Nearest Distance Based on 'PerkinElmer InForm' Software Output |

ISBF | Iterative Selection of Blocks of Features - ISBF |

ISCO08ConveRsions | Converts ISCO-08 to Job Prestige Scores, ISCO-88 and Job Name |

isdals | Provides datasets for Introduction to Statistical Data Analysis for the Life Sciences |

iSDM | Invasive Species Distribution Modelling |

isdparser | Parse 'NOAA' Integrated Surface Data Files |

ISEtools | Tools for Ion Selective Electrodes |

IsingFit | Fitting Ising Models Using the ELasso Method |

isingLenzMC | Monte Carlo for Classical Ising Model |

IsingSampler | Sampling Methods and Distribution Functions for the Ising Model |

islasso | The Induced Smoothed Lasso |

ISLR | Data for an Introduction to Statistical Learning with Applications in R |

ISM | Interpretive Structural Modelling (ISM) |

ismev | An Introduction to Statistical Modeling of Extreme Values |

isni | Index of Local Sensitivity to Nonignorability |

isnullptr | Check if an 'externalptr' is a Null Pointer |

Iso | Functions to Perform Isotonic Regression |

isoband | Generate Isolines and Isobands from Regularly Spaced Elevation Grids |

isoboost | Isotonic Boosting Classification Rules |

isocat | Isotope Origin Clustering and Assignment Tools |

IsoCheck | Isomorphism Check for Multi-Stage Factorial Designs with Randomization Restrictions |

IsoCI | Confidence intervals for current status data based on transformations and bootstrap |

isocir | Isotonic Inference for Circular Data |

ISOcodes | Selected ISO Codes |

IsoCorr | Correcting Drift and Carry-over in Continuous Isotopic Measurements |

isodistrreg | Isotonic Distributional Regression (IDR) |

IsoGene | Order-Restricted Inference for Microarray Experiments |

isopam | Isopam (Clustering) |

isopat | Calculation of isotopic pattern for a given molecular formula |

IsoplotR | Statistical Toolbox for Radiometric Geochronology |

IsoplotRgui | Web Interface to 'IsoplotR' |

ISOpureR | Deconvolution of Tumour Profiles |

isoreader | Read Stable Isotope Data Files |

IsoriX | Isoscape Computation and Inference of Spatial Origins using Mixed Models |

IsoSpecR | The IsoSpec Algorithm |

isoSurv | Isotonic Regression on Survival Analysis |

isotone | Active Set and Generalized PAVA for Isotone Optimization |

isotonic.pen | Penalized Isotonic Regression in one and two dimensions |

IsotopeR | Stable Isotope Mixing Model |

isotree | Isolation-Based Outlier Detection |

ISOweek | Week of the year and weekday according to ISO 8601 |

ispd | Incomplete Split-Plot Designs |

isqg | In Silico Quantitative Genetics |

ISR3 | Iterative Sequential Regression |

ISRaD | Tools and Data for the International Soil Radiocarbon Database |

istacr | Obtaining Open Data from Instituto Canario De Estadistica (ISTAC) API |

iSTATS | A Graphical Interface to Perform STOCSY Analyses on NMR Data |

iSubGen | Integrative Subtype Generation |

isva | Independent Surrogate Variable Analysis |

ISwR | Introductory Statistics with R |

italy | The Italian Survey on Household and Wealth, 2008 and 2010 |

itan | Item Analysis for Multiple Choice Tests |

itcSegment | Individual Tree Crowns Segmentation |

itemanalysis | Classical Test Theory Item Analysis |

iteRates | Parametric rate comparison |

iterators | Provides Iterator Construct |

iterLap | Approximate Probability Densities by Iterated Laplace Approximations |

iterpc | Efficient Iterator for Permutations and Combinations |

itertools | Iterator Tools |

itertools2 | itertools2: Functions creating iterators for efficient looping |

ITGM | Individual Tree Growth Modeling |

ITNr | Analysis of the International Trade Network |

iTOP | Inferring the Topology of Omics Data |

itraxR | Itrax Data Analysis Tools |

ITRLearn | Statistical Learning for Individualized Treatment Regime |

ITRSelect | Variable Selection for Optimal Individualized Dynamic Treatment Regime |

its.analysis | Running Interrupted Time Series Analysis |

itsadug | Interpreting Time Series and Autocorrelated Data Using GAMMs |

itsmr | Time Series Analysis Using the Innovations Algorithm |

IUPS | Incorporating Uncertainties in Propensity Scores |

iva | Instrumental Variable Analysis in Case-Control Association Studies |

ivdesc | Profiling Compliers and Non-Compliers for Instrumental Variable Analysis |

ivdesign | Hypothesis Testing in Cluster-Randomized Encouragement Designs |

ivdoctr | Ensures Mutually Consistent Beliefs When Using IVs |

ivfixed | Instrumental fixed effect panel data model |

ivitr | Estimate IV-Optimal Individualized Treatment Rules |

ivmodel | Statistical Inference and Sensitivity Analysis for Instrumental Variables Model |

ivmte | Instrumental Variables: Extrapolation by Marginal Treatment Effects |

ivpack | Instrumental Variable Estimation |

ivpanel | Instrumental Panel Data Models |

ivprobit | Instrumental Variables Probit Model |

ivreg | Two-Stage Least-Squares Regression with Diagnostics |

ivregEX | Create Independent Evidence in IV Analyses and Do Sensitivity Analysis in Regression and IV Analysis |

ivsacim | Structural Additive Cumulative Intensity Models with IV |

ivtools | Instrumental Variables |

ivx | Robust Econometric Inference |

IVYplot | Produces an IVY Plot (Similar to Dot Plot) with/without Frequencies |

iWeigReg | Improved methods for causal inference and missing data problems |

iWISA | Wavelet-Based Index of Storm Activity |

iZID | Identify Zero-Inflated Distributions |

jaatha | Simulation-Based Maximum Likelihood Parameter Estimation |

jaccard | Test Similarity Between Binary Data using Jaccard/Tanimoto Coefficients |

jack | Jack, Zonal, and Schur Polynomials |

jackalope | A Swift, Versatile Phylogenomic and High-Throughput Sequencing Simulator |

jackknifeKME | Jackknife Estimates of Kaplan-Meier Estimators or Integrals |

jackstrap | Correcting Nonparametric Frontier Measurements for Outliers |

jackstraw | Statistical Inference for Unsupervised Learning |

JacobiEigen | Classical Jacobi Eigenvalue Algorithm |

jacpop | Jaccard Index for Population Structure Identification |

JADE | Blind Source Separation Methods Based on Joint Diagonalization and Some BSS Performance Criteria |

jaggR | Supporting Files and Functions for the Book Bayesian Modelling with 'JAGS' |

jagsUI | A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses |

JamendoR | Access to 'Jamendo' API |

james.analysis | Analysis Tools for the 'JAMES' Framework |

janeaustenr | Jane Austen's Complete Novels |

janitor | Simple Tools for Examining and Cleaning Dirty Data |

jaod | Directory of Open Access Journals Client |

jarbes | Just a Rather Bayesian Evidence Synthesis |

JASPAR | R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices |

JavaGD | Java Graphics Device |

Jaya | Jaya, a Gradient-Free Optimization Algorithm |

JBrowseR | An R Interface to the JBrowse 2 Genome Browser |

jcext | Extended Classification of Weather Types |

jcolors | Colors Palettes for R and 'ggplot2', Additional Themes for 'ggplot2' |

jcp | Joint Change Point Detection |

Jdmbs | Monte Carlo Option Pricing Algorithms for Jump Diffusion Models with Correlational Companies |

jdx | 'Java' Data Exchange for 'R' and 'rJava' |

jeek | A Fast and Scalable Joint Estimator for Integrating Additional Knowledge in Learning Multiple Related Sparse Gaussian Graphical Models |

jetpack | A Friendly Package Manager |

jetset | One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays |

jfa | Bayesian and Classical Audit Sampling |

JFE | Tools and GUI for Analyzing Time Series Data of Just Finance and Econometrics |

JGEE | Joint Generalized Estimating Equation Solver |

JGL | Performs the Joint Graphical Lasso for Sparse Inverse Covariance Estimation on Multiple Classes |

JGR | Java GUI for R |

jiebaR | Chinese Text Segmentation |

jiebaRD | Chinese Text Segmentation Data for jiebaR Package |

jipApprox | Approximate Inclusion Probabilities for Survey Sampling |

jjb | Balamuta Miscellaneous |

jlctree | Joint Latent Class Trees for Joint Modeling of Time-to-Event and Longitudinal Data |

jlsm | Joint Latent Space Model for Social Networks with Multivariate Attributes |

JM | Joint Modeling of Longitudinal and Survival Data |

JMbayes | Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach |

JMbayes2 | Extended Joint Models for Longitudinal and Time-to-Event Data |

jmcm | Joint Mean-Covariance Models using 'Armadillo' and S4 |

JMcmprsk | Joint Models for Longitudinal and Competing Risks Data |

jmdem | Fitting Joint Mean and Dispersion Effects Models |

JMdesign | Joint Modeling of Longitudinal and Survival Data - Power Calculation |

jmetrik | Tools for Interacting with 'jMetrik' |

JMI | Jackknife Mutual Information |

Jmisc | Julian Miscellaneous Function |

jmotif | Time Series Analysis Toolkit Based on Symbolic Aggregate Discretization, i.e. SAX |

jmuOutlier | Permutation Tests for Nonparametric Statistics |

jmv | The 'jamovi' Analyses |

jmvconnect | Connect to the 'jamovi' Statistical Spreadsheet |

jmvcore | Dependencies for the 'jamovi' Framework |

jmvReadWrite | Read and Write 'jamovi' Files ('.omv') |

jocre | Joint Confidence Regions |

JoF | Modelling and Simulating Judgments of Frequency |

Johnson | Johnson Transformation |

joineR | Joint Modelling of Repeated Measurements and Time-to-Event Data |

joineRmeta | Joint Modelling for Meta-Analytic (Multi-Study) Data |

joineRML | Joint Modelling of Multivariate Longitudinal Data and Time-to-Event Outcomes |

joinet | Multivariate Elastic Net Regression |

joint.Cox | Joint Frailty-Copula Models for Tumour Progression and Death in Meta-Analysis |

JointAI | Joint Analysis and Imputation of Incomplete Data |

jointDiag | Joint Approximate Diagonalization of a Set of Square Matrices |

jointMeanCov | Joint Mean and Covariance Estimation for Matrix-Variate Data |

JointModel | Semiparametric Joint Models for Longitudinal and Counting Processes |

JointNets | End-to-End Sparse Gaussian Graphical Model Simulation, Estimation, Visualization, Evaluation and Application |

jointNmix | Joint N-Mixture Models for Site-Associated Species |

jointPm | Risk estimation using the joint probability method |

jointseg | Joint Segmentation of Multivariate (Copy Number) Signals |

joinXL | Perform Joins or Minus Queries on 'Excel' Files |

jomo | Multilevel Joint Modelling Multiple Imputation |

JOPS | Practical Smoothing with P-Splines |

jordan | A Suite of Routines for Working with Jordan Algebras |

JoSAE | Unit-Level and Area-Level Small Area Estimation |

josaplay | Add Josa Based on Previous Letter in Korean |

jose | JavaScript Object Signing and Encryption |

journalabbr | Journal Abbreviations for BibTeX Documents |

JOUSBoost | Implements Under/Oversampling for Probability Estimation |

joyn | Tool for Diagnosis of Tables Joins and Complementary Join Features |

jpeg | Read and write JPEG images |

JPEN | Covariance and Inverse Covariance Matrix Estimation Using Joint Penalty |

jpmesh | Utilities for Japanese Mesh Code |

JQL | Jump Q-Learning for Individualized Interval-Valued Dose Rule |

jqr | Client for 'jq', a 'JSON' Processor |

jquerylib | Obtain 'jQuery' as an HTML Dependency Object |

jrc | Exchange Commands Between R and 'JavaScript' |

JRF | Joint Random Forest (JRF) for the Simultaneous Estimation of Multiple Related Networks |

jrich | Jack-Knife Support for Evolutionary Distinctiveness Indices I and W |

jrt | Item Response Theory Modeling and Scoring for Judgment Data |

jrvFinance | Basic Finance; NPV/IRR/Annuities/Bond-Pricing; Black Scholes |

js | Tools for Working with JavaScript in R |

JSconsole | A 'RStudio' Addin to Send 'JavaScript' Code to the 'V8' Console |

jSDM | Joint Species Distribution Models |

jskm | Kaplan-Meier Plot with 'ggplot2' |

JSM | Semiparametric Joint Modeling of Survival and Longitudinal Data |

JSmediation | Mediation Analysis Using Joint Significance |

jsmodule | 'RStudio' Addins and 'Shiny' Modules for Medical Research |

json64 | A 'Base64' Encode/Decode Package with Support for JSON Output/Input and UTF-8 |

jSonarR | jSonar Analytics Platform API for R |

jsonify | Convert Between 'R' Objects and Javascript Object Notation (JSON) |

jsonld | JSON for Linking Data |

jsonlite | A Simple and Robust JSON Parser and Generator for R |

jsonstat | Interface to 'JSON-stat' |

jsontools | Working with JSON Vectors |

jsonvalidate | Validate 'JSON' |

jsr223 | A 'Java' Platform Integration for 'R' with Programming Languages 'Groovy', 'JavaScript', 'JRuby' ('Ruby'), 'Jython' ('Python'), and 'Kotlin' |

jstable | Create Tables from Different Types of Regression |

jstor | Read Data from JSTOR/DfR |

jsTree | Create Interactive Trees with the 'jQuery' 'jsTree' Plugin |

jsTreeR | A Wrapper of the JavaScript Library 'jsTree' |

jti | Junction Tree Inference |

jtools | Analysis and Presentation of Social Scientific Data |

jtrans | Johnson Transformation for Normality |

jubilee | Forecasting Long-Term Growth of the U.S. Stock Market and Business Cycles |

Julia | Fractal Image Data Generator |

JuliaCall | Seamless Integration Between R and 'Julia' |

JuliaConnectoR | A Functionally Oriented Interface for Integrating 'Julia' with R |

JumpeR | Importing and Working with Track and Field Data |

JumpTest | Financial Jump Detection |

junctions | The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages |

jvcoords | Principal Component Analysis (PCA) and Whitening |

jvnVaR | Value at Risk |

JWileymisc | Miscellaneous Utilities and Functions |

kableExtra | Construct Complex Table with 'kable' and Pipe Syntax |

kader | Kernel Adaptive Density Estimation and Regression |

kamila | Methods for Clustering Mixed-Type Data |

kangar00 | Kernel Approaches for Nonlinear Genetic Association Regression |

KANT | Package to identify and sort genes overexpressed |

kantorovich | Kantorovich Distance Between Probability Measures |

kaos | Encoding of Sequences Based on Frequency Matrix Chaos Game Representation |

kaphom | Test the Homogeneity of Kappa Statistics |

KappaGUI | An R-Shiny Application for Calculating Cohen's and Fleiss' Kappa |

kappalab | Non-Additive Measure and Integral Manipulation Functions |

kappaSize | Sample Size Estimation Functions for Studies of Interobserver Agreement |

KappaV | Calculates "vectorial Kappa", an index of congruence between patchy mosaics |

kaps | K-Adaptive Partitioning for Survival data |

karaoke | Remove Vocals from a Song |

KarsTS | An Interface for Microclimate Time Series Analysis |

kayadata | Kaya Identity Data for Nations and Regions |

kazaam | Tools for Tall Distributed Matrices |

KbMvtSkew | Khattree-Bahuguna's Univariate and Multivariate Skewness |

kcirt | k-Cube Thurstonian IRT Models |

kcopula | The Bivariate K-Copula |

kcpRS | Kernel Change Point Detection on the Running Statistics |

KCSKNNShiny | K-Nearest Neighbour Classifier |

KCSNBShiny | Naive Bayes Classifier |

kde1d | Univariate Kernel Density Estimation |

kdecopula | Kernel Smoothing for Bivariate Copula Densities |

kdensity | Kernel Density Estimation with Parametric Starts and Asymmetric Kernels |

kdetrees | Nonparametric method for identifying discordant phylogenetic trees |

kdevine | Multivariate Kernel Density Estimation with Vine Copulas |

kdist | K-Distribution and Weibull Paper |

kedd | Kernel Estimator and Bandwidth Selection for Density and Its Derivatives |

keep | Arrays with Better Control over Dimension Dropping |

kehra | Collect, Assemble and Model Air Pollution, Weather and Health Data |

kelvin | Calculate Solutions to the Kelvin Differential Equation using Bessel Functions |

Kendall | Kendall rank correlation and Mann-Kendall trend test |

kendallRandomWalks | Simulate and Visualize Kendall Random Walks and Related Distributions |

KENDL | Kernel-Smoothed Nonparametric Methods for Environmental Exposure Data Subject to Detection Limits |

KenSyn | Knowledge Synthesis in Agriculture - From Experimental Network to Meta-Analysis |

kequate | The Kernel Method of Test Equating |

keras | R Interface to 'Keras' |

kerasR | R Interface to the Keras Deep Learning Library |

kerastuneR | Interface to 'Keras Tuner' |

kerdiest | Nonparametric kernel estimation of the distribution function. Bandwidth selection and estimation of related functions |

KERE | Expectile Regression in Reproducing Kernel Hilbert Space |

kergp | Gaussian Process Laboratory |

kerndwd | Distance Weighted Discrimination (DWD) and Kernel Methods |

kernelboot | Smoothed Bootstrap and Random Generation from Kernel Densities |

kernelFactory | Kernel Factory: An Ensemble of Kernel Machines |

Kernelheaping | Kernel Density Estimation for Heaped and Rounded Data |

KernelICA | Kernel Independent Component Analysis |

KernelKnn | Kernel k Nearest Neighbors |

kernelPhil | Kernel Smoothing Tools for Philology and Historical Dialectology |

kernelPSI | Post-Selection Inference for Nonlinear Variable Selection |

kernhaz | Kernel Estimation of Hazard Function in Survival Analysis |

kernlab | Kernel-Based Machine Learning Lab |

kernplus | A Kernel Regression-Based Multidimensional Wind Turbine Power Curve |

kernscr | Kernel Machine Score Test for Semi-Competing Risks |

KernSmooth | Functions for Kernel Smoothing Supporting Wand & Jones (1995) |

KernSmoothIRT | Nonparametric Item Response Theory |

kerTests | Generalized Kernel Two-Sample Tests |

keyATM | Keyword Assisted Topic Model |

Keyboard | Bayesian Designs for Early Phase Clinical Trials |

KeyboardSimulator | Keyboard and Mouse Input Simulation for Windows OS |

keyholder | Store Data About Rows |

keyplayer | Locating Key Players in Social Networks |

keypress | Wait for a Key Press in a Terminal |

keyring | Access the System Credential Store from R |

keyringr | Decrypt Passwords from Gnome Keyring, Windows Data Protection API and macOS Keychain |

keys | Keyboard Shortcuts for 'shiny' |

keyToEnglish | Convert Data to Memorable Phrases |

KFAS | Kalman Filter and Smoother for Exponential Family State Space Models |

kfda | Kernel Fisher Discriminant Analysis |

kfigr | Integrated Code Chunk Anchoring and Referencing for R Markdown Documents |

KFKSDS | Kalman Filter, Smoother and Disturbance Smoother |

KFPCA | Kendall Functional Principal Component Analysis |

kgc | Koeppen-Geiger Climatic Zones |

KGode | Kernel Based Gradient Matching for Parameter Inference in Ordinary Differential Equations |

kgrams | Classical k-gram Language Models |

kgschart | KGS Rank Graph Parser |

khroma | Colour Schemes for Scientific Data Visualization |

kibior | A Simple Data Management and Sharing Tool |

kidney.epi | Kidney Functions: Clinical and Epidemiological |

kim | Functions for Behavioral Science Researchers |

kimisc | Kirill's Miscellaneous Functions |

kin.cohort | Analysis of Kin-Cohort Studies |

kindisperse | Simulate and Estimate Close-Kin Dispersal Kernels |

kineticF | Framework for the Analysis of Kinetic Visual Field Data |

kinship2 | Pedigree Functions |

kirby21.base | Example Data from the Multi-Modal MRI 'Reproducibility' Resource |

kirby21.fmri | Example Functional Imaging Data from the Multi-Modal MRI 'Reproducibility' Resource |

kirby21.t1 | Example T1 Structural Data from the Multi-Modal MRI 'Reproducibility' Resource |

kissmig | a Keep It Simple Species Migration Model |

kit | Data Manipulation Functions Implemented in C |

kitagawa | Spectral Response of Water Wells to Harmonic Strain and Pressure Signals |

kittyR | Kitty Pictures and Meows from R Console |

kiwisR | A Wrapper for Querying KISTERS 'WISKI' Databases via the 'KiWIS' API |

kknn | Weighted k-Nearest Neighbors |

klaR | Classification and Visualization |

klassR | Classifications and Codelists for Statistics Norway |

klausuR | Multiple Choice Test Evaluation |

klexdatr | Kootenay Lake Exploitation Study Data |

klic | Kernel Learning Integrative Clustering |

klsh | Blocking for Record Linkage |

klustR | D3 Dynamic Cluster Visualizations |

km.ci | Confidence intervals for the Kaplan-Meier estimator |

kmc | Kaplan-Meier Estimator with Constraints for Right Censored Data – a Recursive Computational Algorithm |

kmcudaR | 'Yingyang' K-Means and K-NN using NVIDIA CUDA |

KMDA | Kernel-Based Metabolite Differential Analysis |

kmed | Distance-Based k-Medoids |

kmer | Fast K-Mer Counting and Clustering for Biological Sequence Analysis |

kmi | Kaplan-Meier Multiple Imputation for the Analysis of Cumulative Incidence Functions in the Competing Risks Setting |

kml | K-Means for Longitudinal Data |

kml3d | K-Means for Joint Longitudinal Data |

kmlShape | K-Means for Longitudinal Data using Shape-Respectin |